[hdf5] branch upstream updated (09d03ac -> d2a3490)

Gilles Filippini pini at debian.org
Sun May 22 10:39:11 UTC 2016


This is an automated email from the git hooks/post-receive script.

pini pushed a change to branch upstream
in repository hdf5.

      from  09d03ac   Imported Upstream version 1.10.0+docs
       new  d2a3490   Imported Upstream version 1.10.0-patch1+docs

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 CMakeLists.txt                                     |     2 +
 MANIFEST                                           |    12 +-
 README.txt                                         |     2 +-
 c++/src/Makefile.in                                |     6 +-
 c++/src/cpp_doc_config                             |     2 +-
 config/cmake/CTestCustom.cmake                     |    22 +-
 config/cmake/ConfigureChecks.cmake                 |     5 +-
 config/cmake/HDF5UseFortran.cmake                  |    97 +-
 config/cmake/mccacheinit.cmake                     |     2 +-
 config/lt_vers.am                                  |     6 +-
 configure                                          |   250 +-
 configure.ac                                       |     8 +-
 examples/CMakeTests.cmake                          |    14 +
 fortran/examples/CMakeTests.cmake                  |     4 +
 fortran/src/H5_buildiface.F90                      |     2 +-
 fortran/src/H5f90global.F90                        |     8 +-
 fortran/src/Makefile.in                            |     6 +-
 fortran/test/CMakeTests.cmake                      |    93 +-
 hl/c++/src/Makefile.in                             |     6 +-
 hl/fortran/examples/CMakeTests.cmake               |    11 +
 hl/fortran/src/Makefile.in                         |     6 +-
 hl/src/CMakeLists.txt                              |     2 +
 hl/src/Makefile.in                                 |     6 +-
 hl/test/CMakeLists.txt                             |    27 +-
 hl/test/CMakeTests.cmake                           |    24 +-
 hl/test/dectris_hl_perf.c                          |    69 +-
 hl/tools/CMakeLists.txt                            |    64 +-
 hl/tools/{ => gif2h5}/CMakeLists.txt               |    34 +-
 hl/tools/{ => gif2h5}/CMakeTests.cmake             |     8 +-
 hl/tools/h5watch/CMakeLists.txt                    |    59 +
 hl/tools/h5watch/CMakeTests.cmake                  |   191 +
 hl/tools/h5watch/extend_dset.c                     |    29 +-
 hl/tools/h5watch/h5watch.c                         |     7 -
 hl/tools/h5watch/h5watchgentest.c                  |    13 +-
 hl/tools/h5watch/testh5watch.sh.in                 |     4 -
 hl/tools/testfiles/w-err-cmpd1.ddl                 |     3 -
 hl/tools/testfiles/w-err-cmpd2.ddl                 |     3 -
 hl/tools/testfiles/w-err-cmpd3.ddl                 |     3 -
 hl/tools/testfiles/w-err-cmpd4.ddl                 |     3 -
 hl/tools/testfiles/w-err-cmpd5.ddl                 |     3 -
 hl/tools/testfiles/w-err-dset-nomax.ddl            |     3 -
 hl/tools/testfiles/w-err-dset-none.ddl             |     3 -
 hl/tools/testfiles/w-err-dset1.ddl                 |     3 -
 hl/tools/testfiles/w-err-dset2.ddl                 |     3 -
 hl/tools/testfiles/w-err-file.ddl                  |     3 -
 hl/tools/testfiles/w-err-poll.ddl                  |     3 -
 hl/tools/testfiles/w-err-poll0.ddl                 |     3 -
 hl/tools/testfiles/w-err-width.ddl                 |     3 -
 hl/tools/testfiles/w-ext-cmpd-esc-f1.ddl           |     3 -
 hl/tools/testfiles/w-ext-cmpd-esc-f3.ddl           |     3 -
 hl/tools/testfiles/w-ext-cmpd-esc-ff2.ddl          |     3 -
 hl/tools/testfiles/w-ext-cmpd-esc.ddl              |     3 -
 hl/tools/testfiles/w-ext-cmpd-f1.ddl               |     3 -
 hl/tools/testfiles/w-ext-cmpd-f2.ddl               |     3 -
 hl/tools/testfiles/w-ext-cmpd-ff3.ddl              |     3 -
 hl/tools/testfiles/w-ext-cmpd-label.ddl            |     3 -
 hl/tools/testfiles/w-ext-cmpd-two-f1.ddl           |     3 -
 hl/tools/testfiles/w-ext-cmpd-two-f3.ddl           |     3 -
 hl/tools/testfiles/w-ext-cmpd-two-ff2.ddl          |     3 -
 hl/tools/testfiles/w-ext-cmpd-two.ddl              |     3 -
 hl/tools/testfiles/w-ext-cmpd.ddl                  |     3 -
 hl/tools/testfiles/w-ext-early.ddl                 |     3 -
 hl/tools/testfiles/w-ext-late.ddl                  |     3 -
 hl/tools/testfiles/w-ext-one-d.ddl                 |     3 -
 hl/tools/testfiles/w-ext-one-simple.ddl            |     3 -
 hl/tools/testfiles/w-ext-one.ddl                   |     3 -
 hl/tools/testfiles/w-ext-two-d.ddl                 |     3 -
 hl/tools/testfiles/w-ext-two-width.ddl             |     3 -
 hl/tools/testfiles/w-ext-two.ddl                   |     3 -
 hl/tools/testfiles/w-help1.ddl                     |     3 -
 html/Advanced/UsingUnicode/index.html              |    19 +-
 html/H5.format.html                                | 20082 +++++++++++--------
 html/HL/RM_H5LT.html                               |     6 +-
 html/HL/RM_H5PT.html                               |   405 +-
 html/HL/RM_H5PT_c++.html                           |  3018 +--
 html/RM/H5/H5free_memory.htm                       |    31 +-
 html/RM/H5A/H5Aopen_by_idx.htm                     |    66 +-
 ...5Fare_mdc_flushes_disabled_NOT_IMPLEMENTED.htm} |     0
 ... => H5Fdisable_mdc_flushes_NOT_IMPLEMENTED.htm} |     0
 ...m => H5Fenable_mdc_flushes_NOT_IMPLEMENTED.htm} |     0
 ...mdc_flush_disabled_obj_ids_NOT_IMPLEMENTED.htm} |     0
 html/RM/H5O/H5Oenable_mdc_flushes.htm              |     8 +-
 html/RM/H5P/H5Pget_efile_prefix.htm                |   162 +
 html/RM/H5P/H5Pget_layout.htm                      |     4 +-
 html/RM/H5P/H5Pget_virtual_count.htm               |    38 +-
 html/RM/H5P/H5Pget_virtual_dsetname.htm            |    38 +-
 html/RM/H5P/H5Pget_virtual_filename.htm            |    38 +-
 html/RM/H5P/H5Pget_virtual_printf_gap.htm          |    38 +-
 html/RM/H5P/H5Pget_virtual_srcspace.htm            |    38 +-
 html/RM/H5P/H5Pget_virtual_view.htm                |    38 +-
 html/RM/H5P/H5Pget_virtual_vspace.htm              |    38 +-
 html/RM/H5P/H5Pset_efile_prefix.htm                |   191 +
 html/RM/H5P/H5Pset_layout.htm                      |     4 +-
 html/RM/H5P/H5Pset_virtual.htm                     |    38 +-
 html/RM/H5P/H5Pset_virtual_printf_gap.htm          |    38 +-
 html/RM/H5P/H5Pset_virtual_view.htm                |    38 +-
 html/RM/H5S/H5Sget_regular_hyperslab.htm           |    44 +-
 html/RM/H5S/H5Sis_regular_hyperslab.htm            |    44 +-
 html/RM/H5T/H5Tget_member_name.htm                 |    16 +-
 html/RM/RM_H5P.html                                |   124 +-
 html/RM/RM_H5S.html                                |    23 +-
 html/RM/Tools.html                                 |    24 +-
 html/RM/Tools/h5clear.htm                          |     4 +-
 html/RM/Tools/h5format_convert.htm                 |    54 +-
 html/ed_libs/Footer-THGonly.htm                    |     2 +-
 html/ed_libs/Footer-THGonly2.htm                   |     2 +-
 html/ed_libs/Footer-THGonly3.htm                   |     2 +-
 html/ed_libs/Footer.htm                            |     2 +-
 html/ed_libs/Footer2.htm                           |     2 +-
 html/ed_libs/Footer3.htm                           |     2 +-
 html/index.html                                    |     6 +-
 java/examples/datasets/CMakeLists.txt              |    13 +-
 java/examples/datatypes/CMakeLists.txt             |    11 +-
 java/examples/groups/CMakeLists.txt                |    19 +-
 java/examples/intro/CMakeLists.txt                 |    11 +-
 java/src/hdf/hdf5lib/CMakeLists.txt                |     2 +-
 java/src/jni/Makefile.in                           |     6 +-
 java/test/junit.sh.in                              |    17 +-
 m4/aclocal_fc.m4                                   |   105 +-
 release_docs/RELEASE.txt                           |   106 +-
 src/H5Dint.c                                       |    72 +-
 src/H5public.h                                     |     4 +-
 src/Makefile.in                                    |     6 +-
 test/CMakeLists.txt                                |   286 +-
 test/CMakeTests.cmake                              |   621 +-
 test/atomic_reader.c                               |    24 +-
 test/atomic_writer.c                               |    28 +-
 test/cache.c                                       |     2 -
 test/cache_api.c                                   |     2 -
 test/cache_common.h                                |   127 +-
 test/dsets.c                                       |     7 +-
 test/gen_plist.c                                   |    16 +-
 test/h5test.c                                      |     3 +-
 test/swmr_common.h                                 |    24 +-
 test/test_usecases.sh.in                           |     1 +
 test/ttsafe_cancel.c                               |     4 +-
 test/twriteorder.c                                 |    75 +-
 test/use.h                                         |     6 -
 test/use_append_chunk.c                            |    23 +-
 test/use_append_mchunks.c                          |    23 +-
 test/use_common.c                                  |    37 +-
 test/use_disable_mdc_flushes.c                     |    19 +
 test/vds.c                                         |    13 +
 testpar/t_shapesame.c                              |     2 +-
 testpar/t_span_tree.c                              |     2 +-
 testpar/testphdf5.c                                |     2 +-
 tools/CMakeLists.txt                               |     3 +
 tools/h5copy/CMakeTests.cmake                      |     2 +-
 tools/h5diff/CMakeTests.cmake                      |    31 +-
 tools/h5diff/testfiles/h5diff_v1.txt               |     2 +-
 tools/h5diff/testfiles/h5diff_v3.txt               |     2 +-
 tools/h5diff/testh5diff.sh.in                      |    11 +-
 tools/h5dump/CMakeTests.cmake                      |     5 +-
 tools/h5dump/CMakeTestsPBITS.cmake                 |     6 +-
 tools/h5dump/CMakeTestsVDS.cmake                   |    10 +-
 tools/h5dump/CMakeTestsXML.cmake                   |     4 +-
 tools/h5dump/testh5dump.sh.in                      |     2 +
 tools/{h5dump => h5format_convert}/CMakeLists.txt  |    54 +-
 tools/h5format_convert/CMakeTests.cmake            |   463 +
 tools/h5format_convert/h5format_convert.c          |    50 +-
 tools/h5format_convert/testfiles/h5fc_d_file.ddl   |    10 +-
 tools/h5format_convert/testfiles/h5fc_dname.ddl    |    10 +-
 tools/h5format_convert/testfiles/h5fc_ext1_f.ddl   |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext1_i.ddl   |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext1_s.ddl   |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext2_if.ddl  |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext2_is.ddl  |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext2_sf.ddl  |     2 +-
 tools/h5format_convert/testfiles/h5fc_ext3_isf.ddl |     2 +-
 tools/h5format_convert/testfiles/h5fc_help.ddl     |    10 +-
 tools/h5format_convert/testfiles/h5fc_nooption.ddl |    10 +-
 tools/h5format_convert/testfiles/h5fc_v_all.ddl    |     2 +-
 tools/h5format_convert/testfiles/h5fc_v_bt1.ddl    |     2 +-
 tools/h5format_convert/testfiles/h5fc_v_n_1d.ddl   |     2 +-
 tools/h5format_convert/testfiles/h5fc_v_n_all.ddl  |     2 +-
 .../testfiles/h5fc_v_ndata_bt1.ddl                 |     2 +-
 .../testfiles/h5fc_v_non_chunked.ddl               |     2 +-
 .../h5format_convert/testfiles/old_h5fc_ext1_f.ddl |     2 +-
 .../h5format_convert/testfiles/old_h5fc_ext1_i.ddl |     2 +-
 .../h5format_convert/testfiles/old_h5fc_ext1_s.ddl |     2 +-
 .../testfiles/old_h5fc_ext2_if.ddl                 |     2 +-
 .../testfiles/old_h5fc_ext2_is.ddl                 |     2 +-
 .../testfiles/old_h5fc_ext2_sf.ddl                 |     2 +-
 .../testfiles/old_h5fc_ext3_isf.ddl                |     2 +-
 tools/h5format_convert/testh5fc.sh.in              |    95 +-
 tools/h5import/h5importtestutil.sh.in              |    44 +-
 tools/h5ls/CMakeTests.cmake                        |     9 +-
 tools/h5ls/CMakeTestsVDS.cmake                     |     2 +-
 tools/h5repack/CMakeTests.cmake                    |   127 +-
 tools/h5repack/h5repack.sh.in                      |   118 +-
 .../testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl |   112 +
 .../testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl        |    70 +
 .../testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl      |   147 +
 tools/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl  |    58 +
 tools/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl  |    59 +
 tools/h5stat/CMakeTests.cmake                      |     4 +
 tools/h5stat/h5stat_gentest.c                      |     7 +-
 tools/lib/h5diff_attr.c                            |   471 +-
 tools/lib/h5diff_dset.c                            |    41 +-
 tools/misc/CMakeLists.txt                          |    19 +
 tools/misc/CMakeTests.cmake                        |   136 +-
 tools/misc/clear_open_chk.c                        |     2 +
 tools/perform/overhead.c                           |     4 -
 tools/perform/perf.c                               |    18 +-
 tools/perform/pio_engine.c                         |    16 +-
 tools/perform/pio_perf.c                           |     2 +-
 tools/perform/sio_engine.c                         |    18 +-
 207 files changed, 17552 insertions(+), 12404 deletions(-)
 copy hl/tools/{ => gif2h5}/CMakeLists.txt (71%)
 rename hl/tools/{ => gif2h5}/CMakeTests.cmake (81%)
 create mode 100644 hl/tools/h5watch/CMakeLists.txt
 create mode 100644 hl/tools/h5watch/CMakeTests.cmake
 rename html/RM/H5F/{H5Fare_mdc_flushes_disabled.htm => H5Fare_mdc_flushes_disabled_NOT_IMPLEMENTED.htm} (100%)
 rename html/RM/H5F/{H5Fdisable_mdc_flushes.htm => H5Fdisable_mdc_flushes_NOT_IMPLEMENTED.htm} (100%)
 rename html/RM/H5F/{H5Fenable_mdc_flushes.htm => H5Fenable_mdc_flushes_NOT_IMPLEMENTED.htm} (100%)
 rename html/RM/H5F/{H5Fget_mdc_flush_disabled_obj_ids.htm => H5Fget_mdc_flush_disabled_obj_ids_NOT_IMPLEMENTED.htm} (100%)
 create mode 100644 html/RM/H5P/H5Pget_efile_prefix.htm
 create mode 100644 html/RM/H5P/H5Pset_efile_prefix.htm
 copy tools/{h5dump => h5format_convert}/CMakeLists.txt (50%)
 create mode 100644 tools/h5format_convert/CMakeTests.cmake
 create mode 100644 tools/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl
 create mode 100644 tools/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl
 create mode 100644 tools/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl
 create mode 100644 tools/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl
 create mode 100644 tools/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl

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