[zoo-project] 01/03: Add patch to not link libitkv3p_lsqr, not available in ITK 4.10.

[Bas Couwenberg]

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sebastic pushed a commit to branch master
in repository zoo-project.

commit cdb5a08b8d0a4f470590fa24f5697528a4956528
Author: Bas Couwenberg <sebastic at xs4all.nl>
Date:   Sat Jan 21 11:27:15 2017 +0100

    Add patch to not link libitkv3p_lsqr, not available in ITK 4.10.
---
 debian/patches/insighttoolkit-4.10.patch | 18 ++++++++++++++++++
 debian/patches/series                    |  1 +
 2 files changed, 19 insertions(+)

diff --git a/debian/patches/insighttoolkit-4.10.patch b/debian/patches/insighttoolkit-4.10.patch
new file mode 100644
index 0000000..56ff3d5
--- /dev/null
+++ b/debian/patches/insighttoolkit-4.10.patch
@@ -0,0 +1,18 @@
+Description: Don't link libitkv3p_lsqr, not available in ITK 4.10.
+Author: Bas Couwenberg <sebastic at debian.org>
+
+--- a/zoo-project/zoo-kernel/configure.ac
++++ b/zoo-project/zoo-kernel/configure.ac
+@@ -816,10 +816,10 @@ else
+ 	if test -a "${OTBPATH}/include/OTB-${OTBVERS}" ; then 
+ 		OTB_RPATH="$OTBPATH/include/OTB-${OTBVERS}/"
+ 		OTB_CPPFLAGS="-I${OTB_RPATH}ApplicationEngine -I$OTB_RPATH/Common -I$ITKPATH/include/ITK-$ITKVERS -I$OTB_RPATH/Utilities/ITK -I$OTB_RPATH/ -I$OTB_RPATH/IO -I$OTB_RPATH/UtilitiesAdapters/OssimAdapters -I$OTB_RPATH/UtilitiesAdapters/CurlAdapters -I$OTB_RPATH/Utilities/BGL -I$OTB_RPATH/UtilitiesAdapters/ITKPendingPatches -I$OTB_RPATH/Utilities/otbconfigfile $GDAL_CFLAGS"
+-		OTB_LDFLAGS="-L/usr/lib/x86_64-linux-gnu/ -lOTBImageIO-$OTBVERS -lOTBCommon-$OTBVERS -lOTBApplicationEngine-$OTBVERS -L$ITKPATH/lib -lITKBiasCorrection-$ITKVERS -lITKCommon-$ITKVERS -lITKIOImageBase-$ITKVERS -lITKKLMRegionGrowing-$ITKVERS -lITKLabelMap-$ITKVERS -lITKMesh-$ITKVERS -lITKMetaIO-$ITKVERS -lITKOptimizers-$ITKVERS -lITKPath-$ITKVERS -lITKPolynomials-$ITKVERS -lITKQuadEdgeMesh-$ITKVERS -lITKSpatialObjects-$ITKVERS -lITKStatistics-$ITKVERS -lITKVNLInstantiation-$ITKVERS -lITK [...]
++		OTB_LDFLAGS="-L/usr/lib/x86_64-linux-gnu/ -lOTBImageIO-$OTBVERS -lOTBCommon-$OTBVERS -lOTBApplicationEngine-$OTBVERS -L$ITKPATH/lib -lITKBiasCorrection-$ITKVERS -lITKCommon-$ITKVERS -lITKIOImageBase-$ITKVERS -lITKKLMRegionGrowing-$ITKVERS -lITKLabelMap-$ITKVERS -lITKMesh-$ITKVERS -lITKMetaIO-$ITKVERS -lITKOptimizers-$ITKVERS -lITKPath-$ITKVERS -lITKPolynomials-$ITKVERS -lITKQuadEdgeMesh-$ITKVERS -lITKSpatialObjects-$ITKVERS -lITKStatistics-$ITKVERS -lITKVNLInstantiation-$ITKVERS -lITK [...]
+ 	else
+ 		OTB_CPPFLAGS="-I$OTBPATH/include/otb/ApplicationEngine -I$OTBPATH/include/otb/Common -I$ITKPATH/include/ITK-$ITKVERS -I$OTBPATH/include/otb/Utilities/ITK -I$OTBPATH/include/otb/ -I$OTBPATH/include/otb/IO -I$OTBPATH/include/otb/UtilitiesAdapters/OssimAdapters -I$OTBPATH/include/otb/UtilitiesAdapters/CurlAdapters -I$OTBPATH/include/otb/Utilities/BGL -I$OTBPATH/include/otb/UtilitiesAdapters/ITKPendingPatches -I$OTBPATH/include/otb/Utilities/otbconfigfile $GDAL_CFLAGS"
+-		OTB_LDFLAGS="-L$OTBPATH/lib/otb -lOTBIO -lOTBCommon -lOTBApplicationEngine -L$ITKPATH/lib -lITKBiasCorrection-$ITKVERS -lITKCommon-$ITKVERS -lITKIOImageBase-$ITKVERS -lITKKLMRegionGrowing-$ITKVERS -lITKLabelMap-$ITKVERS -lITKMesh-$ITKVERS -lITKMetaIO-$ITKVERS -lITKOptimizers-$ITKVERS -lITKPath-$ITKVERS -lITKPolynomials-$ITKVERS -lITKQuadEdgeMesh-$ITKVERS -lITKSpatialObjects-$ITKVERS -lITKStatistics-$ITKVERS -lITKVNLInstantiation-$ITKVERS -lITKWatersheds-$ITKVERS -litkNetlibSlatec-$ITK [...]
++		OTB_LDFLAGS="-L$OTBPATH/lib/otb -lOTBIO -lOTBCommon -lOTBApplicationEngine -L$ITKPATH/lib -lITKBiasCorrection-$ITKVERS -lITKCommon-$ITKVERS -lITKIOImageBase-$ITKVERS -lITKKLMRegionGrowing-$ITKVERS -lITKLabelMap-$ITKVERS -lITKMesh-$ITKVERS -lITKMetaIO-$ITKVERS -lITKOptimizers-$ITKVERS -lITKPath-$ITKVERS -lITKPolynomials-$ITKVERS -lITKQuadEdgeMesh-$ITKVERS -lITKSpatialObjects-$ITKVERS -lITKStatistics-$ITKVERS -lITKVNLInstantiation-$ITKVERS -lITKWatersheds-$ITKVERS -litkNetlibSlatec-$ITK [...]
+ 
+ 	fi
+ 	OTB_FILE="otbZooWatcher.o service_internal_otb.o"
diff --git a/debian/patches/series b/debian/patches/series
index b6b7131..f2c2036 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,3 +1,4 @@
 hardening-buildflags.patch
 zoo-version.patch
 0001-Fix-issue-when-building-with-OTB-version-upper-or-eq.patch
+insighttoolkit-4.10.patch

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