Bug#903041: h5clear is missing in hdf5-tools
Johannes Hjorth
hjorth at kth.se
Thu Jul 5 15:23:26 BST 2018
Package: hdf5-tools
Version: 1.10.0-patch1+
h5debug and also h5py refers to a utility program h5clear, but it is missing in hdf5-tools.
For example, I have a hdf5 file which I am unable to open. Both h5debug and h5py package suggests to use the h5clear utility, but it is not available.
h5debug network_connect_voxel_log-347-worklog.hdf5
HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 140011363650432:
#000: ../../../src/H5F.c line 579 in H5Fopen(): unable to open file
major: File accessibilty
minor: Unable to open file
#001: ../../../src/H5Fint.c line 1297 in H5F_open(): file is already open for write (may use <h5clear file> to clear file consistency flags)
major: File accessibilty
minor: Unable to open file
cannot open file
Linux 4.16.0-1-amd64 #1 SMP Debian 4.16.5-1 (2018-04-29) x86_64 GNU/Linux
?
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