Bug#903683: libvpf.so: undefined symbols: needs -lm

[Paul Wise]

Package: libogdi3.2
Version: 3.2.1+ds-3
Severity: minor
File: /usr/lib/libvpf.so.3.2
User: debian-qa at lists.debian.org
Usertags: undefined-symbol adequate

libvpf.so needs to link with -lm, see the output of adequate,
symtree and objdump below. I detected this on amd64 but the Debian
build log scanner also detected dpkg-buildpackage complaining about
it on other architectures, see the w3m/getbuildlog output below.

I filed this bug at severity minor since everything currently in Debian
that uses libogdi3.2 (GDAL) seems to also use libm.so.

This bug report brought to you by adequate:

http://bonedaddy.net/pabs3/log/2013/02/23/inadequate-software/
https://piuparts.debian.org/sid/undefined_symbol_inadequate_issue.html
https://piuparts.debian.org/sid/pass/libogdi3.2_3.2.1+ds-3.log

$ adequate libogdi3.2
libogdi3.2: undefined-symbol /usr/lib/libvpf.so.3.2 => sincos
libogdi3.2: undefined-symbol /usr/lib/libvpf.so.3.2 => acos
libogdi3.2: undefined-symbol /usr/lib/libvpf.so.3.2 => cos

$ man adequate | grep -A6  undefined-symbol
       undefined-symbol
           The symbol has not been found in the libraries linked with the
           binary.  Either the binary either needs to be linked with an
           additional shared library, or the dependency on the shared library
           package that provides this symbol is too weak.

           References: Debian Policy §3.5, §8.6, §10.2.

$ lddtree /usr/lib/libvpf.so.3.2
libvpf.so.3.2 => /usr/lib/libvpf.so.3.2 (interpreter => none)
    libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6
        ld-linux-x86-64.so.2 => /lib/x86_64-linux-gnu/ld-linux-x86-64.so.2

$ symtree /usr/lib/libvpf.so.3.2
/usr/lib/libvpf.so.3.2
    libc.so.6 => __stpcpy_chk,strcpy,__printf_chk,exit,readdir,fopen,strncmp,strrchr,closedir,ftell,strncpy,puts,__stack_chk_fail,realloc,abort,memchr,strspn,rewind,strtod,strtol,feof,fgetc,calloc,strlen,tmpfile,memset,fseek,memcmp,__fprintf_chk,memcpy,memcpy,fclose,malloc,strcasecmp,opendir,getenv,stderr,strncasecmp,__fxstat,fileno,fwrite,fread,__memcpy_chk,strchr,iconv,qsort,iconv_open,__ctype_toupper_loc,__strcpy_chk,__ctype_tolower_loc,__cxa_finalize,__sprintf_chk,memmove,access,__strcat_chk,strcmp,free
    WEAK => _ITM_deregisterTMCloneTable,__gmon_start__,_ITM_registerTMCloneTable
    UNRESOLVED => sincos,acos,cos

$ objdump -T /lib/x86_64-linux-gnu/libm.so.6 | grep -E " ($(symtree /usr/lib/libvpf.so.3.2 | sed -n 's/    UNRESOLVED => //p' | tr , '|'))$"
000000000000e910  w   DF .text	0000000000000042  GLIBC_2.2.5 acos
0000000000037470  w  iD  .text	0000000000000047  GLIBC_2.2.5 cos
000000000003cf10  w   DF .text	0000000000004fc2  GLIBC_2.2.5 sincos

$ w3m -dump https://qa.debian.org/bls/packages/o/ogdi-dfsg.html | grep -A2 symbol
  • W shlibs-symbol-not-found (alpha, arm64, armel, armhf, hppa, hurd-i386,
    i386, ia64, kfreebsd-amd64, m68k, mips, mips64el, mipsel, powerpc,
    powerpcspe, ppc64, ppc64el, riscv64, s390x, sh4, sparc64, x32)

$ w3m -dump https://qa.debian.org/bls/bytag/W-shlibs-symbol-not-found.html | grep -A12 description
description

The build logs contains a like like

dpkg-shlibdeps: warning: symbol NAME used by BINARY found in none of the libraries.

Possible reasons:

  • A library not linked with a library needed.
    While this can sometimes make sense in order to allow the using binary to
    decide which of multiple available implementations to use, it means that
    dependency information might be incorrect, optimisations like prelinking
    might fail and stuff like that.

$ chronic getbuildlog ogdi-dfsg last

$ grep 'dpkg-shlibdeps: warning: symbol .* used by .* found in none of the libraries' *.log
ogdi-dfsg_3.2.1+ds-3_alpha.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_alpha.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_alpha.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_alpha.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_arm64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_arm64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_arm64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armel.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armel.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armel.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armel.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armhf.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armhf.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armhf.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_armhf.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hppa.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hppa.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hppa.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hppa.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hurd-i386.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hurd-i386.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hurd-i386.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_hurd-i386.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_i386.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_i386.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_i386.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_i386.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ia64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ia64.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ia64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ia64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_kfreebsd-amd64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_kfreebsd-amd64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_kfreebsd-amd64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_m68k.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_m68k.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_m68k.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_m68k.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips64el.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips64el.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips64el.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips64el.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mipsel.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mipsel.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mipsel.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mipsel.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_mips.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpc.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpc.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpc.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpc.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpcspe.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpcspe.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpcspe.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_powerpcspe.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64el.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64el.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64el.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_ppc64.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_riscv64.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_riscv64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_riscv64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_riscv64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_s390x.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_s390x.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_s390x.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sh4.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sh4.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sh4.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sh4.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sparc64.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sparc64.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sparc64.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_sparc64.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_x32.log:dpkg-shlibdeps: warning: symbol sincos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_x32.log:dpkg-shlibdeps: warning: symbol ceil used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_x32.log:dpkg-shlibdeps: warning: symbol acos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries
ogdi-dfsg_3.2.1+ds-3_x32.log:dpkg-shlibdeps: warning: symbol cos used by debian/libogdi3.2/usr/lib/libvpf.so.3.2 found in none of the libraries

-- System Information:
Debian Release: buster/sid
  APT prefers testing-debug
  APT policy: (900, 'testing-debug'), (900, 'testing'), (800, 'unstable-debug'), (800, 'unstable'), (790, 'buildd-unstable'), (700, 'experimental-debug'), (700, 'experimental'), (690, 'buildd-experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.17.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_AU.utf8, LC_CTYPE=en_AU.utf8 (charmap=UTF-8), LANGUAGE=en_AU.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages libogdi3.2 depends on:
ii  libc6      2.27-4
ii  libexpat1  2.2.5-3
ii  libproj13  5.1.0-1
ii  zlib1g     1:1.2.11.dfsg-1

libogdi3.2 recommends no packages.

Versions of packages libogdi3.2 suggests:
pn  ogdi-bin  <none>

-- no debconf information

-- 
bye,
pabs

https://wiki.debian.org/PaulWise
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