[Git][debian-gis-team/netcdf4-python][upstream] New upstream version 1.4.3.1
Bas Couwenberg
gitlab at salsa.debian.org
Thu Mar 7 05:57:05 GMT 2019
Bas Couwenberg pushed to branch upstream at Debian GIS Project / netcdf4-python
Commits:
7f55ea43 by Bas Couwenberg at 2019-03-07T05:41:16Z
New upstream version 1.4.3.1
- - - - -
6 changed files:
- Changelog
- PKG-INFO
- README.md
- examples/mpi_example.py
- netCDF4/_netCDF4.pyx
- setup.py
Changes:
=====================================
Changelog
=====================================
@@ -1,3 +1,8 @@
+ version 1.4.3.1 (tag v1.4.3.1 rel)
+===================================
+ * fix bug in implementation of NETCDF4_CLASSIC support for parallel IO
+ in v1.4.3 release.
+
version 1.4.3 (tag v1.4.3rel)
=============================
* make set_always_mask work in MFDataset.
=====================================
PKG-INFO
=====================================
@@ -1,6 +1,6 @@
Metadata-Version: 1.1
Name: netCDF4
-Version: 1.4.3
+Version: 1.4.3.1
Author: Jeff Whitaker
Author-email: jeffrey s whitaker at noaa gov
Home-page: https://github.com/Unidata/netcdf4-python
=====================================
README.md
=====================================
@@ -4,10 +4,14 @@
[](https://travis-ci.org/Unidata/netcdf4-python)
[](https://ci.appveyor.com/project/jswhit/netcdf4-python/branch/master)
[](http://python.org/pypi/netCDF4)
+[](https://anaconda.org/conda-forge/netCDF4)
## News
For details on the latest updates, see the [Changelog](https://github.com/Unidata/netcdf4-python/blob/master/Changelog).
+03/07/2019: Version [1.4.3.1](https://pypi.python.org/pypi/netCDF4/1.4.3.1) released.
+Fixes bug in implementation of NETCDF4_CLASSIC parallel IO support in 1.4.3.
+
03/05/2019: Version [1.4.3](https://pypi.python.org/pypi/netCDF4/1.4.3) released. Issues with netcdf-c 4.6.2 fixed (including broken parallel IO). `set_ncstring_attrs()` method added, memoryview buffer now returned when an in-memory Dataset is closed.
10/26/2018: Version [1.4.2](https://pypi.python.org/pypi/netCDF4/1.4.2) released. Minor bugfixes, added `Variable.get_dims()` method and `master_file` kwarg for `MFDataset.__init__`.
=====================================
examples/mpi_example.py
=====================================
@@ -8,7 +8,7 @@ nc = Dataset('parallel_test.nc', 'w', parallel=True, comm=MPI.COMM_WORLD,
# below should work also - MPI_COMM_WORLD and MPI_INFO_NULL will be used.
#nc = Dataset('parallel_test.nc', 'w', parallel=True)
d = nc.createDimension('dim',4)
-v = nc.createVariable('var', np.int, 'dim')
+v = nc.createVariable('var', np.int32, 'dim')
v[rank] = rank
# switch to collective mode, rewrite the data.
v.set_collective(True)
=====================================
netCDF4/_netCDF4.pyx
=====================================
@@ -1185,7 +1185,7 @@ except ImportError:
# python3: zip is already python2's itertools.izip
pass
-__version__ = "1.4.3"
+__version__ = "1.4.3.1"
# Initialize numpy
import posixpath
@@ -2083,6 +2083,7 @@ strings.
cdef size_t initialsize
cdef char *path
cdef char namstring[NC_MAX_NAME+1]
+ cdef int cmode
IF HAS_NC_PAR:
cdef MPI_Comm mpicomm
cdef MPI_Info mpiinfo
@@ -2121,6 +2122,9 @@ strings.
mpiinfo = info.ob_mpi
else:
mpiinfo = MPI_INFO_NULL
+ cmode = NC_MPIIO | NC_NETCDF4
+ if format == 'NETCDF4_CLASSIC':
+ cmode = cmode | NC_CLASSIC_MODEL
self._inmemory = False
if mode == 'w':
@@ -2141,7 +2145,7 @@ strings.
if clobber:
if parallel:
IF HAS_NC_PAR:
- ierr = nc_create_par(path, NC_CLOBBER | NC_MPIIO | NC_NETCDF4, \
+ ierr = nc_create_par(path, NC_CLOBBER | cmode, \
mpicomm, mpiinfo, &grpid)
ELSE:
pass
@@ -2156,7 +2160,7 @@ strings.
else:
if parallel:
IF HAS_NC_PAR:
- ierr = nc_create_par(path, NC_NOCLOBBER | NC_MPIIO | NC_NETCDF4, \
+ ierr = nc_create_par(path, NC_NOCLOBBER | cmode, \
mpicomm, mpiinfo, &grpid)
ELSE:
pass
@@ -2228,7 +2232,7 @@ strings.
if parallel:
# NC_SHARE ignored
IF HAS_NC_PAR:
- ierr = nc_create_par(path, NC_CLOBBER | NC_MPIIO | NC_NETCDF4, \
+ ierr = nc_create_par(path, NC_CLOBBER | cmode, \
mpicomm, mpiinfo, &grpid)
ELSE:
pass
@@ -2243,7 +2247,7 @@ strings.
if parallel:
# NC_SHARE ignored
IF HAS_NC_PAR:
- ierr = nc_create_par(path, NC_NOCLOBBER | NC_MPIIO | NC_NETCDF4, \
+ ierr = nc_create_par(path, NC_NOCLOBBER | cmode, \
mpicomm, mpiinfo, &grpid)
ELSE:
pass
=====================================
setup.py
=====================================
@@ -570,7 +570,7 @@ else:
setup(name="netCDF4",
cmdclass=cmdclass,
- version="1.4.3",
+ version="1.4.3.1",
long_description="netCDF version 4 has many features not found in earlier versions of the library, such as hierarchical groups, zlib compression, multiple unlimited dimensions, and new data types. It is implemented on top of HDF5. This module implements most of the new features, and can read and write netCDF files compatible with older versions of the library. The API is modelled after Scientific.IO.NetCDF, and should be familiar to users of that module.\n\nThis project is hosted on a `GitHub repository <https://github.com/Unidata/netcdf4-python>`_ where you may access the most up-to-date source.",
author="Jeff Whitaker",
author_email="jeffrey.s.whitaker at noaa.gov",
View it on GitLab: https://salsa.debian.org/debian-gis-team/netcdf4-python/commit/7f55ea43b0602ac1f43c895b181355a8203adebb
--
View it on GitLab: https://salsa.debian.org/debian-gis-team/netcdf4-python/commit/7f55ea43b0602ac1f43c895b181355a8203adebb
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