Bug#1004893: gmt: running gmt results in Segfault
Daniel Lakeland
dlakelan at street-artists.org
Thu Feb 3 05:27:26 GMT 2022
Package: gmt
Version: 6.3.0+dfsg-2+b1
Severity: grave
Justification: renders package unusable
X-Debbugs-Cc: dlakelan at street-artists.org
Dear Maintainer,
*** Reporter, please consider answering these questions, where appropriate ***
Running gmt in any way induces a segfault:
dlakelan at tintin:~$ gmt
GMT - The Generic Mapping Tools, Version 6.3.0 [64-bit] [12 cores]
(c) 1991-2021 The GMT Team (https://www.generic-mapping-tools.org/team.html).
Supported in part by the US National Science Foundation (http://www.nsf.gov/)
and volunteers from around the world.
GMT is distributed under the GNU LGPL License (http://www.gnu.org/licenses/lgpl.html).
Dependencies: netCDF, GDAL, PCRE, FFTW, LAPACK, ZLIB, Ghostscript, GraphicsMagick, FFmpeg.
usage: gmt [options]
gmt <module name> [<module-options>]
options:
--help List descriptions of available GMT modules.
--new-script[=L] Write GMT modern mode script template to standard output.
Optionally specify bash|csh|batch [Default is current shell].
--new-glue=name Write C code for external supplements to glue them to GMT.
--show-bindir Show directory with GMT executables.
--show-citation Show the most recent citation for GMT.
--show-classic Show all classic module names.
--show-classic-core Show all classic module names (core only).
--show-cores Show number of available cores.
--show-datadir Show directory/ies with user data.
--show-dataserver Show URL of the remote GMT data server.
--show-doi Show the DOI for the current release.
--show-library Show path of the shared GMT library.
--show-modules Show all modern module names.
--show-modules-core Show all modern module names (core only).
--show-plugindir Show directory for plug-ins.
--show-sharedir Show directory for shared GMT resources.
--show-userdir Show full path of user's ~/.gmt dir
--version Print GMT version number.
if <module-options> is '=' we call exit (0) if module exist and non-zero otherwise.
ERROR: Caught signal number 11 (Segmentation fault) at
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x25)[0x7fb5ddb17965]
[0x563890c50de9]
Stack backtrace:
/lib/x86_64-linux-gnu/libgmt.so.6(sig_handler_unix+0xf4)[0x7fb5ddd85344]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c910)[0x7fb5ddac9910]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x25)[0x7fb5ddb17965]
/lib/x86_64-linux-gnu/libproj.so.22(_ZN5osgeo4proj6common13UnitOfMeasureD1Ev+0x6f)[0x7fb5d973c97f]
/lib/x86_64-linux-gnu/libc.so.6(__cxa_finalize+0xc6)[0x7fb5ddacc556]
/lib/x86_64-linux-gnu/libproj.so.19(+0xb8083)[0x7fb5d5b73083]
Segmentation fault
*** End of the template - remove these template lines ***
-- System Information:
Debian Release: bullseye/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 5.10.0-5-amd64 (SMP w/12 CPU threads)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages gmt depends on:
ii gmt-common 6.3.0+dfsg-2
ii libc6 2.33-5
ii libgmt6 6.3.0+dfsg-2+b1
ii libnetcdf19 1:4.8.1-1
Versions of packages gmt recommends:
ii gmt-dcw 2.1.0-1
ii gmt-gshhg-high [gmt-gshhg-data] 2.3.7-5
gmt suggests no packages.
-- no debconf information
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