[Git][debian-gis-team/pykdtree][upstream] New upstream version 1.3.11+ds

Antonio Valentino (@antonio.valentino) gitlab at salsa.debian.org
Sat Feb 17 07:39:14 GMT 2024



Antonio Valentino pushed to branch upstream at Debian GIS Project / pykdtree


Commits:
f723cac3 by Antonio Valentino at 2024-02-17T07:25:36+00:00
New upstream version 1.3.11+ds
- - - - -


5 changed files:

- .github/dependabot.yml
- .github/workflows/deploy-wheels.yml
- CHANGELOG.md
- pykdtree/__init__.py
- setup.py


Changes:

=====================================
.github/dependabot.yml
=====================================
@@ -8,4 +8,4 @@ updates:
   - package-ecosystem: "github-actions" # See documentation for possible values
     directory: "/" # Location of package manifests
     schedule:
-      interval: "weekly"
+      interval: "monthly"


=====================================
.github/workflows/deploy-wheels.yml
=====================================
@@ -21,7 +21,7 @@ jobs:
           python -m build -s
 
       - name: Upload sdist to build artifacts
-        uses: actions/upload-artifact at v3
+        uses: actions/upload-artifact at v4
         with:
           name: sdist
           path: dist/*.tar.gz
@@ -35,12 +35,16 @@ jobs:
         include:
           - os: windows-2019
             cibw_archs: "AMD64 ARM64"
+            artifact_name: "win"
           - os: macos-11
             cibw_archs: "x86_64 arm64"
+            artifact_name: "mac"
           - os: "ubuntu-20.04"
             cibw_archs: "aarch64"
+            artifact_name: "ubuntu-aarch"
           - os: "ubuntu-20.04"
             cibw_archs: "x86_64"
+            artifact_name: "ubuntu-x86_64"
 
     steps:
       - uses: actions/checkout at v4
@@ -54,18 +58,21 @@ jobs:
           platforms: all
 
       - name: Build wheels
-        uses: pypa/cibuildwheel at v2.16.2
+        uses: pypa/cibuildwheel at v2.16.5
         env:
           CIBW_SKIP: "cp36-* cp37-* cp38-* pp* *i686 *-musllinux_aarch64"
           CIBW_ARCHS: "${{ matrix.cibw_archs }}"
           CIBW_TEST_COMMAND: "pytest -v --pyargs pykdtree"
           CIBW_TEST_REQUIRES: "pytest"
           CIBW_TEST_SKIP: "*_arm64 *_universal2:arm64"
+          # below only for building against unstable numpy
+          CIBW_BUILD_FRONTEND: "pip; args: --no-build-isolation"
+          CIBW_BEFORE_BUILD: "pip install --pre --extra-index-url https://pypi.anaconda.org/scientific-python-nightly-wheels/simple numpy cython setuptools versioneer"
 
       - name: Upload wheel(s) as build artifacts
-        uses: actions/upload-artifact at v3
+        uses: actions/upload-artifact at v4
         with:
-          name: wheels
+          name: wheels-${{ matrix.artifact_name }}
           path: ./wheelhouse/*.whl
 
   upload_pypi:
@@ -73,20 +80,35 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Download sdist artifact
-        uses: actions/download-artifact at v3
+        uses: actions/download-artifact at v4
         with:
           name: sdist
           path: dist
-      - name: Download wheels artifact
-        uses: actions/download-artifact at v3
+      - name: Download wheels artifact - win
+        uses: actions/download-artifact at v4
         with:
-          name: wheels
+          name: wheels-win
+          path: dist
+      - name: Download wheels artifact - mac
+        uses: actions/download-artifact at v4
+        with:
+          name: wheels-mac
+          path: dist
+      - name: Download wheels artifact - ubuntu aarch
+        uses: actions/download-artifact at v4
+        with:
+          name: wheels-ubuntu-aarch
+          path: dist
+      - name: Download wheels artifact - ubuntu x86_64
+        uses: actions/download-artifact at v4
+        with:
+          name: wheels-ubuntu-x86_64
           path: dist
       - name: Publish package to PyPI
         if: github.event.action == 'published'
-        uses: pypa/gh-action-pypi-publish at v1.8.10
+        uses: pypa/gh-action-pypi-publish at v1.8.11
         with:
           user: ${{ secrets.pypi_username }}
           password: ${{ secrets.pypi_password }}
-          skip_existing: true
+          skip-existing: true
 


=====================================
CHANGELOG.md
=====================================
@@ -1,3 +1,21 @@
+## Version 1.3.11 (2024/02/15)
+
+### Issues Closed
+
+* [Issue 106](https://github.com/storpipfugl/pykdtree/issues/106) - Gotchas when installing on MacOS ([PR 107](https://github.com/storpipfugl/pykdtree/pull/107) by [@djhoese](https://github.com/djhoese))
+
+In this release 1 issue was closed.
+
+### Pull Requests Merged
+
+#### Features added
+
+* [PR 109](https://github.com/storpipfugl/pykdtree/pull/109) - Build wheels with numpy 2
+* [PR 107](https://github.com/storpipfugl/pykdtree/pull/107) - Add OpenMP warning when extension fails to import ([106](https://github.com/storpipfugl/pykdtree/issues/106))
+
+In this release 2 pull requests were closed.
+
+
 ## Version 1.3.10 (2023/11/29)
 
 ### Pull Requests Merged


=====================================
pykdtree/__init__.py
=====================================
@@ -0,0 +1,13 @@
+"""Simple wrapper around importing pykdtree for OpenMP use or not."""
+
+try:
+    from . import kdtree
+except ImportError as err:
+    raise ImportError(
+        "Pykdtree failed to import its C extension. This usually means it "
+        "was built with OpenMP (C-level parallelization library) support but "
+        "could not find it on your system. To enable better performance "
+        "OpenMP must be installed (ex. ``brew install omp`` on Mac with "
+        "HomeBrew). Otherwise, try installing Pykdtree from source (ex. "
+        "``pip install --no-binary pykdtree --force-install pykdtree``)."
+    ) from err


=====================================
setup.py
=====================================
@@ -20,8 +20,9 @@ import sys
 import re
 
 import numpy as np
-from Cython.Build import cythonize
-from setuptools import setup, Extension
+from Cython.Build import build_ext
+from Cython.Distutils import Extension
+from setuptools import setup
 from setuptools.command.build_ext import build_ext
 
 
@@ -189,16 +190,18 @@ extensions = [
     Extension('pykdtree.kdtree', sources=['pykdtree/kdtree.pyx', 'pykdtree/_kdtree_core.c'],
               include_dirs=[np.get_include()],
               define_macros=[("NPY_NO_DEPRECATED_API", "NPY_1_7_API_VERSION")],
-              compiler_directions={"language_level": "3"},
+              cython_directives={"language_level": "3"},
               ),
 ]
 
+
 setup(
     name='pykdtree',
-    version='1.3.10',
+    version='1.3.11',
     url="https://github.com/storpipfugl/pykdtree",
     description='Fast kd-tree implementation with OpenMP-enabled queries',
     long_description=readme,
+    long_description_content_type="text/x-rst",
     author='Esben S. Nielsen',
     author_email='storpipfugl at gmail.com',
     packages=['pykdtree'],
@@ -206,7 +209,7 @@ setup(
     install_requires=['numpy'],
     tests_require=['pytest'],
     zip_safe=False,
-    ext_modules=cythonize(extensions),
+    ext_modules=extensions,
     cmdclass={'build_ext': build_ext_subclass},
     classifiers=[
       'Development Status :: 5 - Production/Stable',



View it on GitLab: https://salsa.debian.org/debian-gis-team/pykdtree/-/commit/f723cac39de52a363fc9d5cffc4b16d88a019350

-- 
View it on GitLab: https://salsa.debian.org/debian-gis-team/pykdtree/-/commit/f723cac39de52a363fc9d5cffc4b16d88a019350
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