[commons-math] branch master updated (54f2939 -> 0a35651)
Markus Koschany
apo at moszumanska.debian.org
Fri Aug 26 14:33:48 UTC 2016
This is an automated email from the git hooks/post-receive script.
apo pushed a change to branch master
in repository commons-math.
from 54f2939 Upload to unstable
new 7d1f80a Imported Upstream version 2.2
new 5264bf9 Declare compliance with Debian Policy 3.9.8.
new 272f3e1 Vcs-fields: Use https.
new f167afe Switch from cdbs to dh sequencer.
new 5995618 Add disable-testSampling-test.patch.
new 0a35651 Update changelog
The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
LICENSE.txt | 376 ++
NOTICE.txt | 56 +
RELEASE-NOTES.txt | 157 +
build.xml | 358 ++
checkstyle.xml | 178 +
debian/changelog | 12 +
debian/control | 8 +-
debian/patches/disable-testSampling-test.patch | 32 +
debian/patches/series | 1 +
debian/rules | 6 +-
findbugs-exclude-filter.xml | 254 +
license-header.txt | 16 +
pom.xml | 364 ++
src/main/assembly/bin.xml | 52 +
src/main/assembly/src.xml | 39 +
.../math/ArgumentOutsideDomainException.java | 44 +
.../apache/commons/math/ConvergenceException.java | 99 +
.../apache/commons/math/ConvergingAlgorithm.java | 141 +
.../commons/math/ConvergingAlgorithmImpl.java | 155 +
.../commons/math/DimensionMismatchException.java | 67 +
.../math/DuplicateSampleAbscissaException.java | 51 +
src/main/java/org/apache/commons/math/Field.java | 51 +
.../java/org/apache/commons/math/FieldElement.java | 60 +
.../commons/math/FunctionEvaluationException.java | 211 +
.../commons/math/MathConfigurationException.java | 94 +
.../org/apache/commons/math/MathException.java | 217 +
.../apache/commons/math/MathRuntimeException.java | 717 +++
.../math/MaxEvaluationsExceededException.java | 84 +
.../math/MaxIterationsExceededException.java | 84 +
.../commons/math/analysis/BinaryFunction.java | 120 +
.../math/analysis/BivariateRealFunction.java | 40 +
.../commons/math/analysis/ComposableFunction.java | 506 ++
.../DifferentiableMultivariateRealFunction.java | 51 +
...ifferentiableMultivariateVectorialFunction.java | 36 +
.../DifferentiableUnivariateMatrixFunction.java | 35 +
.../DifferentiableUnivariateRealFunction.java | 34 +
.../DifferentiableUnivariateVectorialFunction.java | 35 +
.../math/analysis/MultivariateMatrixFunction.java | 40 +
.../math/analysis/MultivariateRealFunction.java | 39 +
.../analysis/MultivariateVectorialFunction.java | 39 +
.../math/analysis/TrivariateRealFunction.java | 40 +
.../math/analysis/UnivariateMatrixFunction.java | 37 +
.../math/analysis/UnivariateRealFunction.java | 36 +
.../math/analysis/UnivariateVectorialFunction.java | 37 +
.../integration/LegendreGaussIntegrator.java | 236 +
.../analysis/integration/RombergIntegrator.java | 121 +
.../analysis/integration/SimpsonIntegrator.java | 112 +
.../analysis/integration/TrapezoidIntegrator.java | 142 +
.../integration/UnivariateRealIntegrator.java | 106 +
.../integration/UnivariateRealIntegratorImpl.java | 183 +
.../commons/math/analysis/integration/package.html | 22 +
.../BicubicSplineInterpolatingFunction.java | 558 +++
.../interpolation/BicubicSplineInterpolator.java | 145 +
.../BivariateRealGridInterpolator.java | 44 +
.../DividedDifferenceInterpolator.java | 117 +
.../analysis/interpolation/LinearInterpolator.java | 75 +
.../analysis/interpolation/LoessInterpolator.java | 463 ++
.../MicrosphereInterpolatingFunction.java | 244 +
.../interpolation/MicrosphereInterpolator.java | 118 +
.../MultivariateRealInterpolator.java | 46 +
.../interpolation/NevilleInterpolator.java | 54 +
.../SmoothingBicubicSplineInterpolator.java | 178 +
...oothingPolynomialBicubicSplineInterpolator.java | 143 +
.../analysis/interpolation/SplineInterpolator.java | 127 +
.../TricubicSplineInterpolatingFunction.java | 483 ++
.../interpolation/TricubicSplineInterpolator.java | 198 +
.../TrivariateRealGridInterpolator.java | 49 +
.../interpolation/UnivariateRealInterpolator.java | 39 +
.../math/analysis/interpolation/package.html | 22 +
.../org/apache/commons/math/analysis/package.html | 33 +
.../analysis/polynomials/PolynomialFunction.java | 350 ++
.../PolynomialFunctionLagrangeForm.java | 305 ++
.../polynomials/PolynomialFunctionNewtonForm.java | 221 +
.../polynomials/PolynomialSplineFunction.java | 224 +
.../analysis/polynomials/PolynomialsUtils.java | 281 ++
.../commons/math/analysis/polynomials/package.html | 23 +
.../math/analysis/solvers/BisectionSolver.java | 133 +
.../commons/math/analysis/solvers/BrentSolver.java | 399 ++
.../math/analysis/solvers/LaguerreSolver.java | 434 ++
.../math/analysis/solvers/MullerSolver.java | 415 ++
.../math/analysis/solvers/NewtonSolver.java | 183 +
.../math/analysis/solvers/RiddersSolver.java | 247 +
.../math/analysis/solvers/SecantSolver.java | 230 +
.../analysis/solvers/UnivariateRealSolver.java | 165 +
.../solvers/UnivariateRealSolverFactory.java | 90 +
.../solvers/UnivariateRealSolverFactoryImpl.java | 64 +
.../analysis/solvers/UnivariateRealSolverImpl.java | 304 ++
.../solvers/UnivariateRealSolverUtils.java | 240 +
.../commons/math/analysis/solvers/package.html | 22 +
.../org/apache/commons/math/complex/Complex.java | 1007 ++++
.../apache/commons/math/complex/ComplexField.java | 78 +
.../apache/commons/math/complex/ComplexFormat.java | 383 ++
.../apache/commons/math/complex/ComplexUtils.java | 72 +
.../org/apache/commons/math/complex/package.html | 23 +
src/main/java/org/apache/commons/math/dfp/Dfp.java | 2399 ++++++++++
.../java/org/apache/commons/math/dfp/DfpDec.java | 369 ++
.../java/org/apache/commons/math/dfp/DfpField.java | 750 +++
.../java/org/apache/commons/math/dfp/DfpMath.java | 969 ++++
.../java/org/apache/commons/math/dfp/package.html | 88 +
.../AbstractContinuousDistribution.java | 231 +
.../math/distribution/AbstractDistribution.java | 69 +
.../distribution/AbstractIntegerDistribution.java | 319 ++
.../math/distribution/BetaDistribution.java | 65 +
.../math/distribution/BetaDistributionImpl.java | 284 ++
.../math/distribution/BinomialDistribution.java | 60 +
.../distribution/BinomialDistributionImpl.java | 279 ++
.../math/distribution/CauchyDistribution.java | 63 +
.../math/distribution/CauchyDistributionImpl.java | 320 ++
.../math/distribution/ChiSquaredDistribution.java | 53 +
.../distribution/ChiSquaredDistributionImpl.java | 324 ++
.../math/distribution/ContinuousDistribution.java | 43 +
.../math/distribution/DiscreteDistribution.java | 35 +
.../commons/math/distribution/Distribution.java | 56 +
.../math/distribution/ExponentialDistribution.java | 53 +
.../distribution/ExponentialDistributionImpl.java | 319 ++
.../commons/math/distribution/FDistribution.java | 60 +
.../math/distribution/FDistributionImpl.java | 360 ++
.../math/distribution/GammaDistribution.java | 67 +
.../math/distribution/GammaDistributionImpl.java | 355 ++
.../commons/math/distribution/HasDensity.java | 45 +
.../distribution/HypergeometricDistribution.java | 76 +
.../HypergeometricDistributionImpl.java | 421 ++
.../math/distribution/IntegerDistribution.java | 84 +
.../math/distribution/NormalDistribution.java | 65 +
.../math/distribution/NormalDistributionImpl.java | 349 ++
.../math/distribution/PascalDistribution.java | 73 +
.../math/distribution/PascalDistributionImpl.java | 276 ++
.../math/distribution/PoissonDistribution.java | 64 +
.../math/distribution/PoissonDistributionImpl.java | 343 ++
.../math/distribution/SaddlePointExpansion.java | 201 +
.../commons/math/distribution/TDistribution.java | 46 +
.../math/distribution/TDistributionImpl.java | 303 ++
.../math/distribution/WeibullDistribution.java | 66 +
.../math/distribution/WeibullDistributionImpl.java | 378 ++
.../math/distribution/ZipfDistribution.java | 71 +
.../math/distribution/ZipfDistributionImpl.java | 286 ++
.../apache/commons/math/distribution/package.html | 20 +
.../commons/math/estimation/AbstractEstimator.java | 318 ++
.../math/estimation/EstimatedParameter.java | 126 +
.../math/estimation/EstimationException.java | 61 +
.../commons/math/estimation/EstimationProblem.java | 68 +
.../apache/commons/math/estimation/Estimator.java | 90 +
.../math/estimation/GaussNewtonEstimator.java | 231 +
.../estimation/LevenbergMarquardtEstimator.java | 897 ++++
.../math/estimation/SimpleEstimationProblem.java | 111 +
.../math/estimation/WeightedMeasurement.java | 172 +
.../apache/commons/math/estimation/package.html | 25 +
.../math/exception/ConvergenceException.java | 61 +
.../math/exception/DimensionMismatchException.java | 53 +
.../exception/MathIllegalArgumentException.java | 112 +
.../math/exception/MathIllegalNumberException.java | 74 +
.../math/exception/MathIllegalStateException.java | 140 +
.../commons/math/exception/MathInternalError.java | 50 +
.../commons/math/exception/MathThrowable.java | 62 +
.../MathUnsupportedOperationException.java | 106 +
.../commons/math/exception/NoDataException.java | 47 +
.../exception/NonMonotonousSequenceException.java | 123 +
.../math/exception/NotPositiveException.java | 50 +
.../exception/NotStrictlyPositiveException.java | 50 +
.../math/exception/NullArgumentException.java | 50 +
.../math/exception/NumberIsTooLargeException.java | 89 +
.../math/exception/NumberIsTooSmallException.java | 90 +
.../math/exception/OutOfRangeException.java | 63 +
.../commons/math/exception/ZeroException.java | 48 +
.../org/apache/commons/math/exception/package.html | 23 +
.../commons/math/exception/util/ArgUtils.java | 58 +
.../math/exception/util/DummyLocalizable.java | 58 +
.../commons/math/exception/util/Localizable.java | 43 +
.../math/exception/util/LocalizedFormats.java | 345 ++
.../math/exception/util/MessageFactory.java | 78 +
.../commons/math/exception/util/package.html | 22 +
.../commons/math/fraction/AbstractFormat.java | 210 +
.../apache/commons/math/fraction/BigFraction.java | 1129 +++++
.../commons/math/fraction/BigFractionField.java | 78 +
.../commons/math/fraction/BigFractionFormat.java | 291 ++
.../org/apache/commons/math/fraction/Fraction.java | 655 +++
.../math/fraction/FractionConversionException.java | 56 +
.../commons/math/fraction/FractionField.java | 78 +
.../commons/math/fraction/FractionFormat.java | 274 ++
.../math/fraction/ProperBigFractionFormat.java | 239 +
.../math/fraction/ProperFractionFormat.java | 232 +
.../org/apache/commons/math/fraction/package.html | 22 +
.../math/genetics/AbstractListChromosome.java | 104 +
.../commons/math/genetics/BinaryChromosome.java | 92 +
.../commons/math/genetics/BinaryMutation.java | 52 +
.../apache/commons/math/genetics/Chromosome.java | 111 +
.../commons/math/genetics/ChromosomePair.java | 69 +
.../commons/math/genetics/CrossoverPolicy.java | 35 +
.../math/genetics/ElitisticListPopulation.java | 110 +
.../org/apache/commons/math/genetics/Fitness.java | 35 +
.../math/genetics/FixedGenerationCount.java | 70 +
.../commons/math/genetics/GeneticAlgorithm.java | 228 +
.../genetics/InvalidRepresentationException.java | 63 +
.../commons/math/genetics/ListPopulation.java | 155 +
.../commons/math/genetics/MutationPolicy.java | 33 +
.../commons/math/genetics/OnePointCrossover.java | 117 +
.../math/genetics/PermutationChromosome.java | 44 +
.../apache/commons/math/genetics/Population.java | 55 +
.../apache/commons/math/genetics/RandomKey.java | 290 ++
.../commons/math/genetics/RandomKeyMutation.java | 57 +
.../commons/math/genetics/SelectionPolicy.java | 32 +
.../commons/math/genetics/StoppingCondition.java | 35 +
.../commons/math/genetics/TournamentSelection.java | 114 +
.../org/apache/commons/math/genetics/package.html | 24 +
.../geometry/CardanEulerSingularityException.java | 45 +
.../math/geometry/NotARotationMatrixException.java | 60 +
.../org/apache/commons/math/geometry/Rotation.java | 1072 +++++
.../commons/math/geometry/RotationOrder.java | 175 +
.../org/apache/commons/math/geometry/Vector3D.java | 534 +++
.../commons/math/geometry/Vector3DFormat.java | 343 ++
.../org/apache/commons/math/geometry/package.html | 24 +
.../commons/math/linear/AbstractFieldMatrix.java | 1139 +++++
.../commons/math/linear/AbstractRealMatrix.java | 1071 +++++
.../commons/math/linear/AbstractRealVector.java | 932 ++++
.../org/apache/commons/math/linear/AnyMatrix.java | 48 +
.../commons/math/linear/Array2DRowFieldMatrix.java | 613 +++
.../commons/math/linear/Array2DRowRealMatrix.java | 621 +++
.../commons/math/linear/ArrayFieldVector.java | 869 ++++
.../commons/math/linear/ArrayRealVector.java | 1228 +++++
.../commons/math/linear/BiDiagonalTransformer.java | 381 ++
.../org/apache/commons/math/linear/BigMatrix.java | 331 ++
.../apache/commons/math/linear/BigMatrixImpl.java | 1505 ++++++
.../commons/math/linear/BlockFieldMatrix.java | 1670 +++++++
.../commons/math/linear/BlockRealMatrix.java | 1690 +++++++
.../commons/math/linear/CholeskyDecomposition.java | 71 +
.../math/linear/CholeskyDecompositionImpl.java | 356 ++
.../commons/math/linear/DecompositionSolver.java | 84 +
.../linear/DefaultFieldMatrixChangingVisitor.java | 62 +
.../DefaultFieldMatrixPreservingVisitor.java | 62 +
.../linear/DefaultRealMatrixChangingVisitor.java | 49 +
.../linear/DefaultRealMatrixPreservingVisitor.java | 49 +
.../commons/math/linear/EigenDecomposition.java | 137 +
.../math/linear/EigenDecompositionImpl.java | 619 +++
.../math/linear/FieldDecompositionSolver.java | 86 +
.../commons/math/linear/FieldLUDecomposition.java | 94 +
.../math/linear/FieldLUDecompositionImpl.java | 434 ++
.../apache/commons/math/linear/FieldMatrix.java | 798 +++
.../math/linear/FieldMatrixChangingVisitor.java | 63 +
.../math/linear/FieldMatrixPreservingVisitor.java | 62 +
.../apache/commons/math/linear/FieldVector.java | 358 ++
.../math/linear/InvalidMatrixException.java | 67 +
.../commons/math/linear/LUDecomposition.java | 92 +
.../commons/math/linear/LUDecompositionImpl.java | 423 ++
.../commons/math/linear/MatrixIndexException.java | 55 +
.../apache/commons/math/linear/MatrixUtils.java | 957 ++++
.../math/linear/MatrixVisitorException.java | 52 +
.../math/linear/NonSquareMatrixException.java | 42 +
.../linear/NotPositiveDefiniteMatrixException.java | 43 +
.../math/linear/NotSymmetricMatrixException.java | 43 +
.../commons/math/linear/OpenMapRealMatrix.java | 292 ++
.../commons/math/linear/OpenMapRealVector.java | 915 ++++
.../commons/math/linear/QRDecomposition.java | 77 +
.../commons/math/linear/QRDecompositionImpl.java | 453 ++
.../org/apache/commons/math/linear/RealMatrix.java | 871 ++++
.../math/linear/RealMatrixChangingVisitor.java | 62 +
.../apache/commons/math/linear/RealMatrixImpl.java | 629 +++
.../math/linear/RealMatrixPreservingVisitor.java | 61 +
.../org/apache/commons/math/linear/RealVector.java | 1005 ++++
.../commons/math/linear/RealVectorFormat.java | 341 ++
.../math/linear/SingularMatrixException.java | 40 +
.../math/linear/SingularValueDecomposition.java | 147 +
.../linear/SingularValueDecompositionImpl.java | 379 ++
.../commons/math/linear/SparseFieldMatrix.java | 190 +
.../commons/math/linear/SparseFieldVector.java | 657 +++
.../commons/math/linear/SparseRealMatrix.java | 29 +
.../commons/math/linear/SparseRealVector.java | 27 +
.../math/linear/TriDiagonalTransformer.java | 270 ++
.../org/apache/commons/math/linear/package.html | 20 +
.../commons/math/ode/AbstractIntegrator.java | 440 ++
.../commons/math/ode/ContinuousOutputModel.java | 379 ++
.../commons/math/ode/DerivativeException.java | 62 +
.../ExtendedFirstOrderDifferentialEquations.java | 66 +
.../commons/math/ode/FirstOrderConverter.java | 119 +
.../math/ode/FirstOrderDifferentialEquations.java | 66 +
.../commons/math/ode/FirstOrderIntegrator.java | 61 +
.../commons/math/ode/IntegratorException.java | 64 +
.../commons/math/ode/MultistepIntegrator.java | 412 ++
.../org/apache/commons/math/ode/ODEIntegrator.java | 138 +
.../math/ode/SecondOrderDifferentialEquations.java | 69 +
.../commons/math/ode/SecondOrderIntegrator.java | 60 +
.../math/ode/events/CombinedEventsManager.java | 249 +
.../commons/math/ode/events/EventException.java | 63 +
.../commons/math/ode/events/EventHandler.java | 183 +
.../apache/commons/math/ode/events/EventState.java | 431 ++
.../apache/commons/math/ode/events/package.html | 96 +
.../ode/jacobians/EventHandlerWithJacobians.java | 226 +
.../FirstOrderIntegratorWithJacobians.java | 899 ++++
.../math/ode/jacobians/ODEWithJacobians.java | 54 +
.../math/ode/jacobians/ParameterizedODE.java | 48 +
.../ode/jacobians/StepHandlerWithJacobians.java | 97 +
.../jacobians/StepInterpolatorWithJacobians.java | 188 +
.../apache/commons/math/ode/jacobians/package.html | 28 +
.../ode/nonstiff/AdamsBashforthIntegrator.java | 317 ++
.../commons/math/ode/nonstiff/AdamsIntegrator.java | 131 +
.../math/ode/nonstiff/AdamsMoultonIntegrator.java | 414 ++
.../ode/nonstiff/AdamsNordsieckTransformer.java | 312 ++
.../ode/nonstiff/AdaptiveStepsizeIntegrator.java | 349 ++
.../nonstiff/ClassicalRungeKuttaIntegrator.java | 75 +
.../ClassicalRungeKuttaStepInterpolator.java | 110 +
.../ode/nonstiff/DormandPrince54Integrator.java | 158 +
.../nonstiff/DormandPrince54StepInterpolator.java | 214 +
.../ode/nonstiff/DormandPrince853Integrator.java | 283 ++
.../nonstiff/DormandPrince853StepInterpolator.java | 480 ++
.../ode/nonstiff/EmbeddedRungeKuttaIntegrator.java | 379 ++
.../commons/math/ode/nonstiff/EulerIntegrator.java | 72 +
.../math/ode/nonstiff/EulerStepInterpolator.java | 91 +
.../commons/math/ode/nonstiff/GillIntegrator.java | 74 +
.../math/ode/nonstiff/GillStepInterpolator.java | 125 +
.../ode/nonstiff/GraggBulirschStoerIntegrator.java | 963 ++++
.../GraggBulirschStoerStepInterpolator.java | 401 ++
.../math/ode/nonstiff/HighamHall54Integrator.java | 132 +
.../ode/nonstiff/HighamHall54StepInterpolator.java | 103 +
.../math/ode/nonstiff/MidpointIntegrator.java | 68 +
.../ode/nonstiff/MidpointStepInterpolator.java | 100 +
.../math/ode/nonstiff/RungeKuttaIntegrator.java | 197 +
.../ode/nonstiff/RungeKuttaStepInterpolator.java | 183 +
.../math/ode/nonstiff/ThreeEighthesIntegrator.java | 72 +
.../nonstiff/ThreeEighthesStepInterpolator.java | 116 +
.../apache/commons/math/ode/nonstiff/package.html | 25 +
.../java/org/apache/commons/math/ode/package.html | 167 +
.../ode/sampling/AbstractStepInterpolator.java | 519 ++
.../math/ode/sampling/DummyStepHandler.java | 101 +
.../math/ode/sampling/DummyStepInterpolator.java | 150 +
.../math/ode/sampling/FixedStepHandler.java | 62 +
.../ode/sampling/NordsieckStepInterpolator.java | 291 ++
.../commons/math/ode/sampling/StepHandler.java | 78 +
.../math/ode/sampling/StepInterpolator.java | 132 +
.../commons/math/ode/sampling/StepNormalizer.java | 161 +
.../apache/commons/math/ode/sampling/package.html | 60 +
.../DifferentiableMultivariateRealOptimizer.java | 112 +
...fferentiableMultivariateVectorialOptimizer.java | 114 +
.../apache/commons/math/optimization/GoalType.java | 35 +
.../math/optimization/LeastSquaresConverter.java | 193 +
...artDifferentiableMultivariateRealOptimizer.java | 228 +
...fferentiableMultivariateVectorialOptimizer.java | 238 +
.../MultiStartMultivariateRealOptimizer.java | 216 +
.../MultiStartUnivariateRealOptimizer.java | 318 ++
.../optimization/MultivariateRealOptimizer.java | 101 +
.../math/optimization/OptimizationException.java | 68 +
.../math/optimization/RealConvergenceChecker.java | 55 +
.../math/optimization/RealPointValuePair.java | 88 +
.../math/optimization/SimpleRealPointChecker.java | 87 +
.../optimization/SimpleScalarValueChecker.java | 81 +
.../optimization/SimpleVectorialPointChecker.java | 90 +
.../optimization/SimpleVectorialValueChecker.java | 90 +
.../math/optimization/UnivariateRealOptimizer.java | 116 +
.../optimization/VectorialConvergenceChecker.java | 55 +
.../math/optimization/VectorialPointValuePair.java | 100 +
.../optimization/direct/DirectSearchOptimizer.java | 418 ++
.../math/optimization/direct/MultiDirectional.java | 144 +
.../math/optimization/direct/NelderMead.java | 181 +
.../math/optimization/direct/PowellOptimizer.java | 298 ++
.../commons/math/optimization/direct/package.html | 24 +
.../math/optimization/fitting/CurveFitter.java | 197 +
.../fitting/GaussianDerivativeFunction.java | 104 +
.../math/optimization/fitting/GaussianFitter.java | 117 +
.../optimization/fitting/GaussianFunction.java | 159 +
.../fitting/GaussianParametersGuesser.java | 271 ++
.../fitting/HarmonicCoefficientsGuesser.java | 300 ++
.../math/optimization/fitting/HarmonicFitter.java | 133 +
.../optimization/fitting/HarmonicFunction.java | 80 +
.../fitting/ParametricGaussianFunction.java | 165 +
.../fitting/ParametricRealFunction.java | 50 +
.../optimization/fitting/PolynomialFitter.java | 108 +
.../fitting/WeightedObservedPoint.java | 75 +
.../commons/math/optimization/fitting/package.html | 30 +
.../general/AbstractLeastSquaresOptimizer.java | 374 ++
.../AbstractScalarDifferentiableOptimizer.java | 207 +
.../general/ConjugateGradientFormula.java | 49 +
.../optimization/general/GaussNewtonOptimizer.java | 135 +
.../general/LevenbergMarquardtOptimizer.java | 888 ++++
.../NonLinearConjugateGradientOptimizer.java | 294 ++
.../math/optimization/general/Preconditioner.java | 52 +
.../commons/math/optimization/general/package.html | 22 +
.../linear/AbstractLinearOptimizer.java | 130 +
.../math/optimization/linear/LinearConstraint.java | 233 +
.../linear/LinearObjectiveFunction.java | 147 +
.../math/optimization/linear/LinearOptimizer.java | 89 +
.../linear/NoFeasibleSolutionException.java | 41 +
.../math/optimization/linear/Relationship.java | 67 +
.../math/optimization/linear/SimplexSolver.java | 185 +
.../math/optimization/linear/SimplexTableau.java | 589 +++
.../linear/UnboundedSolutionException.java | 41 +
.../commons/math/optimization/linear/package.html | 22 +
.../apache/commons/math/optimization/package.html | 72 +
.../AbstractUnivariateRealOptimizer.java | 275 ++
.../optimization/univariate/BracketFinder.java | 295 ++
.../optimization/univariate/BrentOptimizer.java | 227 +
.../math/optimization/univariate/package.html | 22 +
src/main/java/org/apache/commons/math/package.html | 20 +
.../math/random/AbstractRandomGenerator.java | 272 ++
.../apache/commons/math/random/AbstractWell.java | 186 +
.../commons/math/random/BitsStreamGenerator.java | 153 +
.../random/CorrelatedRandomVectorGenerator.java | 304 ++
.../commons/math/random/EmpiricalDistribution.java | 133 +
.../math/random/EmpiricalDistributionImpl.java | 479 ++
.../math/random/GaussianRandomGenerator.java | 47 +
.../commons/math/random/JDKRandomGenerator.java | 50 +
.../commons/math/random/MersenneTwister.java | 259 +
.../math/random/NormalizedRandomGenerator.java | 38 +
.../apache/commons/math/random/RandomAdaptor.java | 198 +
.../org/apache/commons/math/random/RandomData.java | 272 ++
.../apache/commons/math/random/RandomDataImpl.java | 966 ++++
.../commons/math/random/RandomGenerator.java | 148 +
.../commons/math/random/RandomVectorGenerator.java | 35 +
.../random/UncorrelatedRandomVectorGenerator.java | 93 +
.../math/random/UniformRandomGenerator.java | 61 +
.../random/UnitSphereRandomVectorGenerator.java | 84 +
.../apache/commons/math/random/ValueServer.java | 385 ++
.../org/apache/commons/math/random/Well1024a.java | 106 +
.../org/apache/commons/math/random/Well19937a.java | 108 +
.../org/apache/commons/math/random/Well19937c.java | 115 +
.../org/apache/commons/math/random/Well44497a.java | 111 +
.../org/apache/commons/math/random/Well44497b.java | 119 +
.../org/apache/commons/math/random/Well512a.java | 107 +
.../org/apache/commons/math/random/package.html | 132 +
.../java/org/apache/commons/math/special/Beta.java | 202 +
.../java/org/apache/commons/math/special/Erf.java | 92 +
.../org/apache/commons/math/special/Gamma.java | 339 ++
.../org/apache/commons/math/special/package.html | 20 +
.../org/apache/commons/math/stat/Frequency.java | 603 +++
.../org/apache/commons/math/stat/StatUtils.java | 663 +++
.../commons/math/stat/clustering/Cluster.java | 74 +
.../commons/math/stat/clustering/Clusterable.java | 46 +
.../stat/clustering/EuclideanIntegerPoint.java | 120 +
.../stat/clustering/KMeansPlusPlusClusterer.java | 333 ++
.../commons/math/stat/clustering/package.html | 20 +
.../commons/math/stat/correlation/Covariance.java | 274 ++
.../math/stat/correlation/PearsonsCorrelation.java | 285 ++
.../stat/correlation/SpearmansCorrelation.java | 172 +
.../commons/math/stat/correlation/package.html | 22 +
.../AbstractStorelessUnivariateStatistic.java | 183 +
.../descriptive/AbstractUnivariateStatistic.java | 232 +
.../descriptive/AggregateSummaryStatistics.java | 416 ++
.../stat/descriptive/DescriptiveStatistics.java | 721 +++
.../descriptive/MultivariateSummaryStatistics.java | 637 +++
.../StatisticalMultivariateSummary.java | 120 +
.../math/stat/descriptive/StatisticalSummary.java | 65 +
.../stat/descriptive/StatisticalSummaryValues.java | 186 +
.../descriptive/StorelessUnivariateStatistic.java | 86 +
.../math/stat/descriptive/SummaryStatistics.java | 717 +++
.../SynchronizedDescriptiveStatistics.java | 172 +
.../SynchronizedMultivariateSummaryStatistics.java | 299 ++
.../descriptive/SynchronizedSummaryStatistics.java | 333 ++
.../math/stat/descriptive/UnivariateStatistic.java | 53 +
.../math/stat/descriptive/WeightedEvaluation.java | 49 +
.../math/stat/descriptive/moment/FirstMoment.java | 160 +
.../math/stat/descriptive/moment/FourthMoment.java | 142 +
.../stat/descriptive/moment/GeometricMean.java | 205 +
.../math/stat/descriptive/moment/Kurtosis.java | 222 +
.../commons/math/stat/descriptive/moment/Mean.java | 272 ++
.../math/stat/descriptive/moment/SecondMoment.java | 124 +
.../math/stat/descriptive/moment/SemiVariance.java | 379 ++
.../math/stat/descriptive/moment/Skewness.java | 213 +
.../stat/descriptive/moment/StandardDeviation.java | 271 ++
.../math/stat/descriptive/moment/ThirdMoment.java | 139 +
.../math/stat/descriptive/moment/Variance.java | 610 +++
.../descriptive/moment/VectorialCovariance.java | 152 +
.../stat/descriptive/moment/VectorialMean.java | 103 +
.../math/stat/descriptive/moment/package.html | 20 +
.../commons/math/stat/descriptive/package.html | 41 +
.../commons/math/stat/descriptive/rank/Max.java | 163 +
.../commons/math/stat/descriptive/rank/Median.java | 55 +
.../commons/math/stat/descriptive/rank/Min.java | 163 +
.../math/stat/descriptive/rank/Percentile.java | 497 ++
.../math/stat/descriptive/rank/package.html | 20 +
.../math/stat/descriptive/summary/Product.java | 224 +
.../commons/math/stat/descriptive/summary/Sum.java | 220 +
.../math/stat/descriptive/summary/SumOfLogs.java | 165 +
.../stat/descriptive/summary/SumOfSquares.java | 154 +
.../math/stat/descriptive/summary/package.html | 20 +
.../commons/math/stat/inference/ChiSquareTest.java | 222 +
.../math/stat/inference/ChiSquareTestImpl.java | 424 ++
.../commons/math/stat/inference/OneWayAnova.java | 103 +
.../math/stat/inference/OneWayAnovaImpl.java | 210 +
.../apache/commons/math/stat/inference/TTest.java | 771 +++
.../commons/math/stat/inference/TTestImpl.java | 1069 +++++
.../commons/math/stat/inference/TestUtils.java | 436 ++
.../UnknownDistributionChiSquareTest.java | 144 +
.../commons/math/stat/inference/package.html | 23 +
.../java/org/apache/commons/math/stat/package.html | 20 +
.../commons/math/stat/ranking/NaNStrategy.java | 49 +
.../commons/math/stat/ranking/NaturalRanking.java | 464 ++
.../math/stat/ranking/RankingAlgorithm.java | 41 +
.../commons/math/stat/ranking/TiesStrategy.java | 55 +
.../apache/commons/math/stat/ranking/package.html | 22 +
.../AbstractMultipleLinearRegression.java | 366 ++
.../regression/GLSMultipleLinearRegression.java | 136 +
.../stat/regression/MultipleLinearRegression.java | 70 +
.../regression/OLSMultipleLinearRegression.java | 233 +
.../math/stat/regression/SimpleRegression.java | 639 +++
.../commons/math/stat/regression/package.html | 22 +
.../math/transform/FastCosineTransformer.java | 262 +
.../math/transform/FastFourierTransformer.java | 912 ++++
.../math/transform/FastHadamardTransformer.java | 252 +
.../math/transform/FastSineTransformer.java | 252 +
.../commons/math/transform/RealTransformer.java | 80 +
.../org/apache/commons/math/transform/package.html | 22 +
.../java/org/apache/commons/math/util/BigReal.java | 292 ++
.../org/apache/commons/math/util/BigRealField.java | 78 +
.../apache/commons/math/util/CompositeFormat.java | 220 +
.../commons/math/util/ContinuedFraction.java | 208 +
.../commons/math/util/DefaultTransformer.java | 80 +
.../org/apache/commons/math/util/DoubleArray.java | 104 +
.../org/apache/commons/math/util/FastMath.java | 4047 ++++++++++++++++
.../org/apache/commons/math/util/MathUtils.java | 2265 +++++++++
.../commons/math/util/MultidimensionalCounter.java | 316 ++
.../commons/math/util/NumberTransformer.java | 39 +
.../commons/math/util/OpenIntToDoubleHashMap.java | 600 +++
.../commons/math/util/OpenIntToFieldHashMap.java | 620 +++
.../commons/math/util/ResizableDoubleArray.java | 936 ++++
.../apache/commons/math/util/TransformerMap.java | 189 +
.../java/org/apache/commons/math/util/package.html | 20 +
.../localization/LocalizedFormats_fr.properties | 274 ++
src/main/resources/templates/math-release-notes.vm | 121 +
src/site/resources/images/math.gif | Bin 0 -> 15169 bytes
src/site/resources/style/project.css | 1 +
.../userguide/TrajectoryDeterminationProblem.java | 187 +
.../userguide/estimation-class-diagram.png | Bin 0 -> 20220 bytes
.../userguide/estimation-sequence-diagram.png | Bin 0 -> 36021 bytes
src/site/site.xml | 71 +
src/site/xdoc/changes.xml | 1312 +++++
src/site/xdoc/developers.xml | 311 ++
src/site/xdoc/download_math.xml | 138 +
src/site/xdoc/index.xml | 86 +
src/site/xdoc/issue-tracking.xml | 102 +
src/site/xdoc/mail-lists.xml | 202 +
src/site/xdoc/proposal.xml | 132 +
src/site/xdoc/userguide/analysis.xml | 413 ++
src/site/xdoc/userguide/complex.xml | 150 +
src/site/xdoc/userguide/distribution.xml | 95 +
src/site/xdoc/userguide/fraction.xml | 110 +
src/site/xdoc/userguide/genetics.xml | 135 +
src/site/xdoc/userguide/geometry.xml | 141 +
src/site/xdoc/userguide/index.xml | 147 +
src/site/xdoc/userguide/linear.xml | 205 +
src/site/xdoc/userguide/ode.xml | 440 ++
src/site/xdoc/userguide/optimization.xml | 271 ++
src/site/xdoc/userguide/overview.xml | 163 +
src/site/xdoc/userguide/random.xml | 538 +++
src/site/xdoc/userguide/special.xml | 70 +
src/site/xdoc/userguide/stat.xml | 1061 ++++
src/site/xdoc/userguide/transform.xml | 46 +
src/site/xdoc/userguide/utilities.xml | 195 +
src/site/xdoc/userguide/xdoc.xsl | 68 +
src/test/R/ChiSquareDistributionTestCases.R | 97 +
src/test/R/FDistributionTestCases.R | 92 +
src/test/R/GammaDistributionTestCases.R | 92 +
src/test/R/README.txt | 168 +
src/test/R/TDistributionTestCases.R | 100 +
src/test/R/TTestCases | 106 +
src/test/R/WeibullDistributionTestCases.R | 92 +
src/test/R/anovaTestCases | 72 +
src/test/R/binomialTestCases | 127 +
src/test/R/cauchyTestCases.R | 97 +
src/test/R/chiSquareTestCases | 101 +
src/test/R/correlationTestCases | 225 +
src/test/R/covarianceTestCases | 146 +
src/test/R/descriptiveTestCases | 83 +
src/test/R/exponentialTestCases | 103 +
src/test/R/hypergeometricTestCases | 136 +
src/test/R/multipleOLSRegressionTestCases | 309 ++
src/test/R/normalTestCases | 111 +
src/test/R/pascalTestCases | 135 +
src/test/R/poissonTestCases | 116 +
src/test/R/regressionTestCases | 159 +
src/test/R/testAll | 67 +
src/test/R/testFunctions | 86 +
.../math/ArgumentOutsideDomainExceptionTest.java | 40 +
.../commons/math/ConvergenceExceptionTest.java | 76 +
.../math/DuplicateSampleAbscissaExceptionTest.java | 38 +
.../math/FunctionEvaluationExceptionTest.java | 140 +
.../math/MathConfigurationExceptionTest.java | 75 +
.../org/apache/commons/math/MathExceptionTest.java | 142 +
.../math/MaxIterationsExceededExceptionTest.java | 53 +
.../org/apache/commons/math/RetryTestCase.java | 56 +
.../java/org/apache/commons/math/TestUtils.java | 516 ++
.../commons/math/analysis/BinaryFunctionTest.java | 77 +
.../math/analysis/ComposableFunctionTest.java | 147 +
.../commons/math/analysis/Expm1Function.java | 39 +
.../commons/math/analysis/MonitoredFunction.java | 48 +
.../commons/math/analysis/QuinticFunction.java | 40 +
.../apache/commons/math/analysis/SinFunction.java | 50 +
.../apache/commons/math/analysis/SincFunction.java | 50 +
.../commons/math/analysis/SumSincFunction.java | 84 +
.../integration/LegendreGaussIntegratorTest.java | 114 +
.../integration/RombergIntegratorTest.java | 114 +
.../integration/SimpsonIntegratorTest.java | 113 +
.../integration/TrapezoidIntegratorTest.java | 113 +
.../BicubicSplineInterpolatingFunctionTest.java | 448 ++
.../BicubicSplineInterpolatorTest.java | 170 +
.../DividedDifferenceInterpolatorTest.java | 143 +
.../interpolation/LinearInterpolatorTest.java | 148 +
.../interpolation/LoessInterpolatorTest.java | 255 +
.../interpolation/MicrosphereInterpolatorTest.java | 133 +
.../interpolation/NevilleInterpolatorTest.java | 144 +
.../SmoothingBicubicSplineInterpolatorTest.java | 179 +
...ingPolynomialBicubicSplineInterpolatorTest.java | 180 +
.../interpolation/SplineInterpolatorTest.java | 221 +
.../TricubicSplineInterpolatingFunctionTest.java | 546 +++
.../TricubicSplineInterpolatorTest.java | 212 +
.../PolynomialFunctionLagrangeFormTest.java | 150 +
.../PolynomialFunctionNewtonFormTest.java | 149 +
.../polynomials/PolynomialFunctionTest.java | 271 ++
.../polynomials/PolynomialSplineFunctionTest.java | 148 +
.../analysis/polynomials/PolynomialsUtilsTest.java | 218 +
.../math/analysis/solvers/BisectionSolverTest.java | 194 +
.../math/analysis/solvers/BrentSolverTest.java | 389 ++
.../math/analysis/solvers/LaguerreSolverTest.java | 199 +
.../math/analysis/solvers/MullerSolverTest.java | 271 ++
.../math/analysis/solvers/NewtonSolverTest.java | 109 +
.../math/analysis/solvers/RiddersSolverTest.java | 160 +
.../UnivariateRealSolverFactoryImplTest.java | 75 +
.../solvers/UnivariateRealSolverUtilsTest.java | 141 +
.../commons/math/complex/ComplexFieldTest.java | 44 +
.../math/complex/ComplexFormatAbstractTest.java | 362 ++
.../commons/math/complex/ComplexFormatTest.java | 33 +
.../apache/commons/math/complex/ComplexTest.java | 996 ++++
.../commons/math/complex/ComplexUtilsTest.java | 104 +
.../math/complex/FrenchComplexFormatTest.java | 34 +
.../org/apache/commons/math/dfp/Decimal10.java | 99 +
.../org/apache/commons/math/dfp/DfpDecTest.java | 565 +++
.../org/apache/commons/math/dfp/DfpMathTest.java | 587 +++
.../java/org/apache/commons/math/dfp/DfpTest.java | 1507 ++++++
.../math/distribution/BetaDistributionTest.java | 303 ++
.../distribution/BinomialDistributionTest.java | 130 +
.../math/distribution/CauchyDistributionTest.java | 129 +
.../distribution/ChiSquareDistributionTest.java | 148 +
.../ContinuousDistributionAbstractTest.java | 371 ++
.../distribution/ExponentialDistributionTest.java | 137 +
.../math/distribution/FDistributionTest.java | 150 +
.../math/distribution/GammaDistributionTest.java | 169 +
.../HypergeometricDistributionTest.java | 229 +
.../IntegerDistributionAbstractTest.java | 415 ++
.../math/distribution/NormalDistributionTest.java | 222 +
.../math/distribution/PascalDistributionTest.java | 136 +
.../math/distribution/PoissonDistributionTest.java | 231 +
.../math/distribution/TDistributionTest.java | 135 +
.../math/distribution/WeibullDistributionTest.java | 144 +
.../math/distribution/ZipfDistributionTest.java | 89 +
.../math/estimation/EstimatedParameterTest.java | 74 +
.../math/estimation/GaussNewtonEstimatorTest.java | 724 +++
.../LevenbergMarquardtEstimatorTest.java | 832 ++++
.../commons/math/estimation/MinpackTest.java | 1538 ++++++
.../math/estimation/WeightedMeasurementTest.java | 128 +
.../exception/DimensionMismatchExceptionTest.java | 34 +
.../NonMonotonousSequenceExceptionTest.java | 47 +
.../math/exception/NotPositiveExceptionTest.java | 35 +
.../NotStrictlyPositiveExceptionTest.java | 35 +
.../exception/NumberIsTooLargeExceptionTest.java | 35 +
.../exception/NumberIsTooSmallExceptionTest.java | 35 +
.../math/exception/OutOfRangeExceptionTest.java | 35 +
.../commons/math/exception/util/ArgUtilsTest.java | 76 +
.../math/exception/util/MessageFactoryTest.java | 57 +
.../math/fraction/BigFractionFieldTest.java | 44 +
.../math/fraction/BigFractionFormatTest.java | 323 ++
.../commons/math/fraction/BigFractionTest.java | 577 +++
.../commons/math/fraction/FractionFieldTest.java | 44 +
.../commons/math/fraction/FractionFormatTest.java | 303 ++
.../apache/commons/math/fraction/FractionTest.java | 583 +++
.../math/genetics/BinaryChromosomeTest.java | 67 +
.../commons/math/genetics/BinaryMutationTest.java | 44 +
.../commons/math/genetics/ChromosomeTest.java | 111 +
.../math/genetics/DummyBinaryChromosome.java | 44 +
.../commons/math/genetics/DummyRandomKey.java | 44 +
.../math/genetics/ElitisticListPopulationTest.java | 53 +
.../commons/math/genetics/FitnessCachingTest.java | 94 +
.../math/genetics/FixedGenerationCountTest.java | 63 +
.../math/genetics/GeneticAlgorithmTestBinary.java | 122 +
.../genetics/GeneticAlgorithmTestPermutations.java | 132 +
.../commons/math/genetics/ListPopulationTest.java | 61 +
.../math/genetics/OnePointCrossoverTest.java | 59 +
.../math/genetics/RandomKeyMutationTest.java | 44 +
.../commons/math/genetics/RandomKeyTest.java | 164 +
.../math/genetics/TournamentSelectionTest.java | 56 +
.../math/geometry/FrenchVector3DFormatTest.java | 34 +
.../commons/math/geometry/RotationOrderTest.java | 62 +
.../apache/commons/math/geometry/RotationTest.java | 488 ++
.../math/geometry/Vector3DFormatAbstractTest.java | 361 ++
.../commons/math/geometry/Vector3DFormatTest.java | 34 +
.../apache/commons/math/geometry/Vector3DTest.java | 226 +
.../math/linear/AbstractRealVectorTest.java | 244 +
.../math/linear/Array2DRowRealMatrixTest.java | 1008 ++++
.../commons/math/linear/ArrayFieldVectorTest.java | 632 +++
.../commons/math/linear/ArrayRealVectorTest.java | 1310 +++++
.../math/linear/BiDiagonalTransformerTest.java | 204 +
.../commons/math/linear/BigMatrixImplTest.java | 836 ++++
.../commons/math/linear/BlockFieldMatrixTest.java | 1288 +++++
.../commons/math/linear/BlockRealMatrixTest.java | 1204 +++++
.../math/linear/CholeskyDecompositionImplTest.java | 150 +
.../commons/math/linear/CholeskySolverTest.java | 119 +
.../math/linear/EigenDecompositionImplTest.java | 533 +++
.../commons/math/linear/EigenSolverTest.java | 158 +
.../math/linear/FieldLUDecompositionImplTest.java | 297 ++
.../commons/math/linear/FieldMatrixImplTest.java | 1005 ++++
.../math/linear/FrenchRealVectorFormatTest.java | 34 +
.../math/linear/InvalidMatrixExceptionTest.java | 32 +
.../math/linear/LUDecompositionImplTest.java | 288 ++
.../apache/commons/math/linear/LUSolverTest.java | 179 +
.../math/linear/MatrixIndexExceptionTest.java | 38 +
.../commons/math/linear/MatrixUtilsTest.java | 404 ++
.../math/linear/QRDecompositionImplTest.java | 256 +
.../apache/commons/math/linear/QRSolverTest.java | 213 +
.../commons/math/linear/RealMatrixImplTest.java | 1008 ++++
.../math/linear/RealVectorFormatAbstractTest.java | 387 ++
.../commons/math/linear/RealVectorFormatTest.java | 34 +
.../linear/SingularValueDecompositionImplTest.java | 250 +
.../math/linear/SingularValueSolverTest.java | 147 +
.../commons/math/linear/SparseFieldMatrixTest.java | 684 +++
.../commons/math/linear/SparseFieldVectorTest.java | 216 +
.../commons/math/linear/SparseRealMatrixTest.java | 671 +++
.../commons/math/linear/SparseRealVectorTest.java | 1194 +++++
.../math/linear/TriDiagonalTransformerTest.java | 175 +
.../math/ode/ContinuousOutputModelTest.java | 197 +
.../commons/math/ode/FirstOrderConverterTest.java | 113 +
.../org/apache/commons/math/ode/TestProblem1.java | 91 +
.../org/apache/commons/math/ode/TestProblem2.java | 93 +
.../org/apache/commons/math/ode/TestProblem3.java | 132 +
.../org/apache/commons/math/ode/TestProblem4.java | 159 +
.../org/apache/commons/math/ode/TestProblem5.java | 44 +
.../org/apache/commons/math/ode/TestProblem6.java | 93 +
.../commons/math/ode/TestProblemAbstract.java | 191 +
.../commons/math/ode/TestProblemFactory.java | 50 +
.../commons/math/ode/TestProblemHandler.java | 157 +
.../commons/math/ode/events/EventStateTest.java | 76 +
.../FirstOrderIntegratorWithJacobiansTest.java | 437 ++
.../ode/nonstiff/AdamsBashforthIntegratorTest.java | 157 +
.../ode/nonstiff/AdamsMoultonIntegratorTest.java | 157 +
.../ClassicalRungeKuttaIntegratorTest.java | 308 ++
.../ClassicalRungeKuttaStepInterpolatorTest.java | 94 +
.../nonstiff/DormandPrince54IntegratorTest.java | 363 ++
.../DormandPrince54StepInterpolatorTest.java | 152 +
.../nonstiff/DormandPrince853IntegratorTest.java | 428 ++
.../DormandPrince853StepInterpolatorTest.java | 152 +
.../math/ode/nonstiff/EulerIntegratorTest.java | 188 +
.../ode/nonstiff/EulerStepInterpolatorTest.java | 182 +
.../math/ode/nonstiff/GillIntegratorTest.java | 243 +
.../ode/nonstiff/GillStepInterpolatorTest.java | 95 +
.../nonstiff/GraggBulirschStoerIntegratorTest.java | 365 ++
.../GraggBulirschStoerStepInterpolatorTest.java | 154 +
.../ode/nonstiff/HighamHall54IntegratorTest.java | 355 ++
.../nonstiff/HighamHall54StepInterpolatorTest.java | 152 +
.../math/ode/nonstiff/MidpointIntegratorTest.java | 188 +
.../ode/nonstiff/MidpointStepInterpolatorTest.java | 95 +
.../commons/math/ode/nonstiff/StepProblem.java | 64 +
.../ode/nonstiff/ThreeEighthesIntegratorTest.java | 238 +
.../ThreeEighthesStepInterpolatorTest.java | 94 +
.../ode/sampling/DummyStepInterpolatorTest.java | 144 +
.../sampling/NordsieckStepInterpolatorTest.java | 92 +
.../ode/sampling/StepInterpolatorTestUtils.java | 90 +
.../math/ode/sampling/StepNormalizerTest.java | 119 +
...ifferentiableMultivariateRealOptimizerTest.java | 159 +
...entiableMultivariateVectorialOptimizerTest.java | 192 +
.../MultiStartMultivariateRealOptimizerTest.java | 81 +
.../MultiStartUnivariateRealOptimizerTest.java | 102 +
.../optimization/direct/MultiDirectionalTest.java | 245 +
.../math/optimization/direct/NelderMeadTest.java | 334 ++
.../optimization/direct/PowellOptimizerTest.java | 163 +
.../math/optimization/fitting/CurveFitterTest.java | 156 +
.../optimization/fitting/GaussianFitterTest.java | 321 ++
.../optimization/fitting/HarmonicFitterTest.java | 133 +
.../fitting/ParametricGaussianFunctionTest.java | 158 +
.../optimization/fitting/PolynomialFitterTest.java | 135 +
.../general/GaussNewtonOptimizerTest.java | 572 +++
.../general/LevenbergMarquardtOptimizerTest.java | 663 +++
.../math/optimization/general/MinpackTest.java | 1531 ++++++
.../NonLinearConjugateGradientOptimizerTest.java | 492 ++
.../optimization/linear/SimplexSolverTest.java | 458 ++
.../optimization/linear/SimplexTableauTest.java | 111 +
.../optimization/univariate/BracketFinderTest.java | 70 +
.../univariate/BrentOptimizerTest.java | 146 +
.../math/random/AbstractRandomGeneratorTest.java | 144 +
.../CorrelatedRandomVectorGeneratorTest.java | 148 +
.../math/random/EmpiricalDistributionTest.java | 259 +
.../math/random/GaussianRandomGeneratorTest.java | 43 +
.../commons/math/random/MersenneTwisterTest.java | 424 ++
.../commons/math/random/RandomAdaptorTest.java | 104 +
.../apache/commons/math/random/RandomDataTest.java | 990 ++++
.../commons/math/random/TestRandomGenerator.java | 42 +
.../UncorrelatedRandomVectorGeneratorTest.java | 84 +
.../math/random/UniformRandomGeneratorTest.java | 43 +
.../commons/math/random/ValueServerTest.java | 199 +
.../apache/commons/math/random/Well1024aTest.java | 200 +
.../apache/commons/math/random/Well19937aTest.java | 110 +
.../apache/commons/math/random/Well19937cTest.java | 110 +
.../apache/commons/math/random/Well44497aTest.java | 110 +
.../apache/commons/math/random/Well44497bTest.java | 110 +
.../apache/commons/math/random/Well512aTest.java | 71 +
.../org/apache/commons/math/special/BetaTest.java | 119 +
.../org/apache/commons/math/special/ErfTest.java | 190 +
.../org/apache/commons/math/special/GammaTest.java | 151 +
.../commons/math/stat/CertifiedDataTest.java | 154 +
.../apache/commons/math/stat/FrequencyTest.java | 287 ++
.../apache/commons/math/stat/StatUtilsTest.java | 468 ++
.../stat/clustering/EuclideanIntegerPointTest.java | 65 +
.../clustering/KMeansPlusPlusClustererTest.java | 169 +
.../math/stat/correlation/CovarianceTest.java | 236 +
.../stat/correlation/PearsonsCorrelationTest.java | 308 ++
.../correlation/SpearmansRankCorrelationTest.java | 130 +
.../math/stat/data/CertifiedDataAbstractTest.java | 156 +
.../org/apache/commons/math/stat/data/LewTest.java | 29 +
.../apache/commons/math/stat/data/LotteryTest.java | 29 +
.../AbstractUnivariateStatisticTest.java | 102 +
.../AggregateSummaryStatisticsTest.java | 290 ++
.../descriptive/DescriptiveStatisticsTest.java | 296 ++
.../math/stat/descriptive/InteractionTest.java | 88 +
.../math/stat/descriptive/ListUnivariateImpl.java | 213 +
.../stat/descriptive/ListUnivariateImplTest.java | 157 +
.../descriptive/MixedListUnivariateImplTest.java | 202 +
.../MultivariateSummaryStatisticsTest.java | 309 ++
.../descriptive/StatisticalSummaryValuesTest.java | 85 +
.../StorelessUnivariateStatisticAbstractTest.java | 211 +
.../stat/descriptive/SummaryStatisticsTest.java | 299 ++
.../SynchronizedDescriptiveStatisticsTest.java | 32 +
...chronizedMultivariateSummaryStatisticsTest.java | 33 +
.../SynchronizedSummaryStatisticsTest.java | 31 +
.../UnivariateStatisticAbstractTest.java | 181 +
.../stat/descriptive/moment/FirstMomentTest.java | 54 +
.../stat/descriptive/moment/FourthMomentTest.java | 54 +
.../stat/descriptive/moment/GeometricMeanTest.java | 83 +
.../math/stat/descriptive/moment/KurtosisTest.java | 70 +
.../math/stat/descriptive/moment/MeanTest.java | 71 +
.../stat/descriptive/moment/SecondMomentTest.java | 54 +
.../stat/descriptive/moment/SemiVarianceTest.java | 142 +
.../math/stat/descriptive/moment/SkewnessTest.java | 69 +
.../descriptive/moment/StandardDeviationTest.java | 99 +
.../stat/descriptive/moment/ThirdMomentTest.java | 54 +
.../math/stat/descriptive/moment/VarianceTest.java | 120 +
.../moment/VectorialCovarianceTest.java | 101 +
.../stat/descriptive/moment/VectorialMeanTest.java | 95 +
.../math/stat/descriptive/rank/MaxTest.java | 78 +
.../math/stat/descriptive/rank/MedianTest.java | 53 +
.../math/stat/descriptive/rank/MinTest.java | 78 +
.../math/stat/descriptive/rank/PercentileTest.java | 159 +
.../math/stat/descriptive/summary/ProductTest.java | 87 +
.../math/stat/descriptive/summary/SumLogTest.java | 83 +
.../math/stat/descriptive/summary/SumSqTest.java | 69 +
.../math/stat/descriptive/summary/SumTest.java | 77 +
.../math/stat/inference/ChiSquareFactoryTest.java | 37 +
.../math/stat/inference/ChiSquareTestTest.java | 251 +
.../math/stat/inference/OneWayAnovaTest.java | 120 +
.../math/stat/inference/TTestFactoryTest.java | 37 +
.../commons/math/stat/inference/TTestTest.java | 291 ++
.../commons/math/stat/inference/TestUtilsTest.java | 458 ++
.../math/stat/ranking/NaturalRankingTest.java | 204 +
.../GLSMultipleLinearRegressionTest.java | 297 ++
.../MultipleLinearRegressionAbstractTest.java | 136 +
.../OLSMultipleLinearRegressionTest.java | 512 ++
.../math/stat/regression/SimpleRegressionTest.java | 363 ++
.../math/transform/FastCosineTransformerTest.java | 121 +
.../math/transform/FastFourierTransformerTest.java | 174 +
.../transform/FastHadamardTransformerTest.java | 119 +
.../math/transform/FastSineTransformerTest.java | 120 +
.../apache/commons/math/util/BigRealFieldTest.java | 44 +
.../org/apache/commons/math/util/BigRealTest.java | 128 +
.../commons/math/util/ContinuedFractionTest.java | 56 +
.../commons/math/util/DefaultTransformerTest.java | 102 +
.../commons/math/util/DoubleArrayAbstractTest.java | 132 +
.../math/util/FastMathStrictComparisonTest.java | 248 +
.../org/apache/commons/math/util/FastMathTest.java | 1118 +++++
.../commons/math/util/FastMathTestPerformance.java | 377 ++
.../apache/commons/math/util/MathUtilsTest.java | 1640 +++++++
.../math/util/MultidimensionalCounterTest.java | 169 +
.../math/util/OpenIntToDoubleHashMapTest.java | 304 ++
.../commons/math/util/OpenIntToFieldTest.java | 315 ++
.../math/util/ResizableDoubleArrayTest.java | 540 +++
.../org/apache/commons/math/util/TestBean.java | 72 +
.../commons/math/util/TransformerMapTest.java | 114 +
.../org/apache/commons/math/random/emptyFile.txt | 0
.../org/apache/commons/math/random/testData.txt | 1000 ++++
.../org/apache/commons/math/stat/data/Lew.txt | 252 +
.../org/apache/commons/math/stat/data/Lottery.txt | 261 +
.../org/apache/commons/math/stat/data/Mavro.txt | 110 +
.../org/apache/commons/math/stat/data/Michelso.txt | 160 +
.../org/apache/commons/math/stat/data/NumAcc1.txt | 63 +
.../org/apache/commons/math/stat/data/NumAcc2.txt | 1061 ++++
.../org/apache/commons/math/stat/data/NumAcc3.txt | 1061 ++++
.../org/apache/commons/math/stat/data/NumAcc4.txt | 1061 ++++
.../org/apache/commons/math/stat/data/PiDigits.txt | 5060 ++++++++++++++++++++
test-jar.xml | 130 +
880 files changed, 207261 insertions(+), 8 deletions(-)
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create mode 100644 RELEASE-NOTES.txt
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create mode 100644 src/main/java/org/apache/commons/math/analysis/integration/LegendreGaussIntegrator.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/interpolation/BicubicSplineInterpolatingFunction.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/interpolation/LinearInterpolator.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/interpolation/MicrosphereInterpolatingFunction.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/interpolation/SplineInterpolator.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/polynomials/PolynomialFunction.java
create mode 100644 src/main/java/org/apache/commons/math/analysis/polynomials/PolynomialFunctionLagrangeForm.java
create mode 100644 src/main/java/org/apache/commons/math/analysis/polynomials/PolynomialFunctionNewtonForm.java
create mode 100644 src/main/java/org/apache/commons/math/analysis/polynomials/PolynomialSplineFunction.java
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create mode 100644 src/main/java/org/apache/commons/math/analysis/solvers/SecantSolver.java
create mode 100644 src/main/java/org/apache/commons/math/analysis/solvers/UnivariateRealSolver.java
create mode 100644 src/main/java/org/apache/commons/math/analysis/solvers/UnivariateRealSolverFactory.java
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create mode 100644 src/main/java/org/apache/commons/math/dfp/DfpField.java
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create mode 100644 src/main/java/org/apache/commons/math/distribution/BetaDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/BetaDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/BinomialDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/BinomialDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/CauchyDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/CauchyDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/ChiSquaredDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/ChiSquaredDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/ContinuousDistribution.java
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create mode 100644 src/main/java/org/apache/commons/math/distribution/ExponentialDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/ExponentialDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/FDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/FDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/GammaDistribution.java
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create mode 100644 src/main/java/org/apache/commons/math/distribution/HypergeometricDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/HypergeometricDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/IntegerDistribution.java
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create mode 100644 src/main/java/org/apache/commons/math/distribution/NormalDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/PascalDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/PascalDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/PoissonDistribution.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/PoissonDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/SaddlePointExpansion.java
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create mode 100644 src/main/java/org/apache/commons/math/distribution/TDistributionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/distribution/WeibullDistribution.java
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create mode 100644 src/main/java/org/apache/commons/math/estimation/AbstractEstimator.java
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create mode 100644 src/main/java/org/apache/commons/math/estimation/EstimationProblem.java
create mode 100644 src/main/java/org/apache/commons/math/estimation/Estimator.java
create mode 100644 src/main/java/org/apache/commons/math/estimation/GaussNewtonEstimator.java
create mode 100644 src/main/java/org/apache/commons/math/estimation/LevenbergMarquardtEstimator.java
create mode 100644 src/main/java/org/apache/commons/math/estimation/SimpleEstimationProblem.java
create mode 100644 src/main/java/org/apache/commons/math/estimation/WeightedMeasurement.java
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create mode 100644 src/main/java/org/apache/commons/math/exception/DimensionMismatchException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/MathIllegalArgumentException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/MathIllegalNumberException.java
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create mode 100644 src/main/java/org/apache/commons/math/exception/MathUnsupportedOperationException.java
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create mode 100644 src/main/java/org/apache/commons/math/exception/NonMonotonousSequenceException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/NotPositiveException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/NotStrictlyPositiveException.java
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create mode 100644 src/main/java/org/apache/commons/math/exception/NumberIsTooLargeException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/NumberIsTooSmallException.java
create mode 100644 src/main/java/org/apache/commons/math/exception/OutOfRangeException.java
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create mode 100644 src/main/java/org/apache/commons/math/fraction/package.html
create mode 100644 src/main/java/org/apache/commons/math/genetics/AbstractListChromosome.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/BinaryChromosome.java
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create mode 100644 src/main/java/org/apache/commons/math/genetics/Chromosome.java
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create mode 100644 src/main/java/org/apache/commons/math/genetics/CrossoverPolicy.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/ElitisticListPopulation.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/Fitness.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/FixedGenerationCount.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/GeneticAlgorithm.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/InvalidRepresentationException.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/ListPopulation.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/MutationPolicy.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/OnePointCrossover.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/PermutationChromosome.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/Population.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/RandomKey.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/RandomKeyMutation.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/SelectionPolicy.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/StoppingCondition.java
create mode 100644 src/main/java/org/apache/commons/math/genetics/TournamentSelection.java
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create mode 100644 src/main/java/org/apache/commons/math/geometry/NotARotationMatrixException.java
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create mode 100644 src/main/java/org/apache/commons/math/geometry/RotationOrder.java
create mode 100644 src/main/java/org/apache/commons/math/geometry/Vector3D.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/AbstractRealMatrix.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/AnyMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/Array2DRowFieldMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/Array2DRowRealMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/ArrayFieldVector.java
create mode 100644 src/main/java/org/apache/commons/math/linear/ArrayRealVector.java
create mode 100644 src/main/java/org/apache/commons/math/linear/BiDiagonalTransformer.java
create mode 100644 src/main/java/org/apache/commons/math/linear/BigMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/BigMatrixImpl.java
create mode 100644 src/main/java/org/apache/commons/math/linear/BlockFieldMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/BlockRealMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/CholeskyDecomposition.java
create mode 100644 src/main/java/org/apache/commons/math/linear/CholeskyDecompositionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/linear/DecompositionSolver.java
create mode 100644 src/main/java/org/apache/commons/math/linear/DefaultFieldMatrixChangingVisitor.java
create mode 100644 src/main/java/org/apache/commons/math/linear/DefaultFieldMatrixPreservingVisitor.java
create mode 100644 src/main/java/org/apache/commons/math/linear/DefaultRealMatrixChangingVisitor.java
create mode 100644 src/main/java/org/apache/commons/math/linear/DefaultRealMatrixPreservingVisitor.java
create mode 100644 src/main/java/org/apache/commons/math/linear/EigenDecomposition.java
create mode 100644 src/main/java/org/apache/commons/math/linear/EigenDecompositionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldDecompositionSolver.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldLUDecomposition.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldLUDecompositionImpl.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldMatrixChangingVisitor.java
create mode 100644 src/main/java/org/apache/commons/math/linear/FieldMatrixPreservingVisitor.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/LUDecomposition.java
create mode 100644 src/main/java/org/apache/commons/math/linear/LUDecompositionImpl.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/MatrixVisitorException.java
create mode 100644 src/main/java/org/apache/commons/math/linear/NonSquareMatrixException.java
create mode 100644 src/main/java/org/apache/commons/math/linear/NotPositiveDefiniteMatrixException.java
create mode 100644 src/main/java/org/apache/commons/math/linear/NotSymmetricMatrixException.java
create mode 100644 src/main/java/org/apache/commons/math/linear/OpenMapRealMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/OpenMapRealVector.java
create mode 100644 src/main/java/org/apache/commons/math/linear/QRDecomposition.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/RealMatrix.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/RealMatrixPreservingVisitor.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/SingularMatrixException.java
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create mode 100644 src/main/java/org/apache/commons/math/linear/SparseFieldMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/SparseFieldVector.java
create mode 100644 src/main/java/org/apache/commons/math/linear/SparseRealMatrix.java
create mode 100644 src/main/java/org/apache/commons/math/linear/SparseRealVector.java
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