[libmtj-java] 03/04: Merge tag 'upstream/1.0.4'

Andreas Tille tille at debian.org
Thu Jan 28 14:00:45 UTC 2016


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tille pushed a commit to branch master
in repository libmtj-java.

commit b64e7befccbab79ed2083e30685c1d5f8a6e4086
Merge: 998b31f 0ea9099
Author: Andreas Tille <tille at debian.org>
Date:   Thu Jan 28 14:59:09 2016 +0100

    Merge tag 'upstream/1.0.4'
    
    Upstream version 1.0.4

 .check-diff.sh                                     |   7 +
 .formatting.xml                                    |   8 +
 .gitignore                                         |   4 +
 .settings.xml                                      |  12 +
 .travis.yml                                        |  27 +
 LICENSE                                            | 165 +++++
 README.md                                          |  60 +-
 build.xml                                          |  19 -
 pom.xml                                            | 134 +++-
 .../no/uib/cipr/matrix/AbstractDenseMatrix.java    |  47 +-
 .../java/no/uib/cipr/matrix/AbstractMatrix.java    |  40 +-
 .../no/uib/cipr/matrix/AbstractSymmBandMatrix.java |   7 +-
 .../uib/cipr/matrix/AbstractSymmDenseMatrix.java   |  45 +-
 .../no/uib/cipr/matrix/AbstractSymmPackMatrix.java |   6 +-
 .../uib/cipr/matrix/AbstractTriangBandMatrix.java  |  14 +-
 .../uib/cipr/matrix/AbstractTriangDenseMatrix.java |  36 +-
 .../uib/cipr/matrix/AbstractTriangPackMatrix.java  |  14 +-
 .../java/no/uib/cipr/matrix/AbstractVector.java    |  16 +-
 src/main/java/no/uib/cipr/matrix/BandCholesky.java |  28 +-
 src/main/java/no/uib/cipr/matrix/BandLU.java       |   9 +-
 src/main/java/no/uib/cipr/matrix/BandMatrix.java   |  16 +-
 .../java/no/uib/cipr/matrix/DenseCholesky.java     |   4 +-
 src/main/java/no/uib/cipr/matrix/DenseLU.java      |  22 +-
 src/main/java/no/uib/cipr/matrix/DenseMatrix.java  |  81 ++-
 src/main/java/no/uib/cipr/matrix/DenseVector.java  |  10 +-
 .../java/no/uib/cipr/matrix/DenseVectorSub.java    |  62 +-
 src/main/java/no/uib/cipr/matrix/Diag.java         |  25 +-
 src/main/java/no/uib/cipr/matrix/EVD.java          |  17 +-
 src/main/java/no/uib/cipr/matrix/JobEig.java       |  27 +-
 src/main/java/no/uib/cipr/matrix/JobEigRange.java  |  39 +-
 src/main/java/no/uib/cipr/matrix/JobSVD.java       |  65 +-
 src/main/java/no/uib/cipr/matrix/LQ.java           |  16 +-
 .../no/uib/cipr/matrix/LowerSPDBandMatrix.java     |   4 +-
 .../no/uib/cipr/matrix/LowerSymmBandMatrix.java    |   9 +-
 .../no/uib/cipr/matrix/LowerSymmDenseMatrix.java   |   1 -
 .../no/uib/cipr/matrix/LowerSymmPackMatrix.java    |   1 -
 .../no/uib/cipr/matrix/LowerTriangBandMatrix.java  |  12 +-
 .../no/uib/cipr/matrix/LowerTriangDenseMatrix.java |  29 +-
 .../no/uib/cipr/matrix/LowerTriangPackMatrix.java  |   1 -
 src/main/java/no/uib/cipr/matrix/Matrices.java     |  87 ++-
 src/main/java/no/uib/cipr/matrix/Matrix.java       | 178 ++---
 src/main/java/no/uib/cipr/matrix/PackCholesky.java |  14 +-
 .../java/no/uib/cipr/matrix/PermutationMatrix.java | 194 +++---
 src/main/java/no/uib/cipr/matrix/QL.java           |  16 +-
 src/main/java/no/uib/cipr/matrix/QR.java           |  16 +-
 src/main/java/no/uib/cipr/matrix/QRP.java          | 387 ++++++-----
 src/main/java/no/uib/cipr/matrix/RQ.java           |  14 +-
 .../java/no/uib/cipr/matrix/SPDTridiagMatrix.java  |   4 +-
 src/main/java/no/uib/cipr/matrix/SVD.java          |  23 +-
 src/main/java/no/uib/cipr/matrix/Side.java         |  25 +-
 src/main/java/no/uib/cipr/matrix/SymmBandEVD.java  |  13 +-
 src/main/java/no/uib/cipr/matrix/SymmDenseEVD.java |  18 +-
 src/main/java/no/uib/cipr/matrix/SymmEVD.java      |   1 -
 src/main/java/no/uib/cipr/matrix/SymmPackEVD.java  |  10 +-
 .../java/no/uib/cipr/matrix/SymmTridiagEVD.java    |  17 +-
 .../java/no/uib/cipr/matrix/SymmTridiagMatrix.java |   4 +-
 src/main/java/no/uib/cipr/matrix/Transpose.java    |  25 +-
 .../java/no/uib/cipr/matrix/TridiagMatrix.java     |   9 +-
 .../uib/cipr/matrix/UnitLowerTriangBandMatrix.java |   5 +-
 .../cipr/matrix/UnitLowerTriangDenseMatrix.java    |  11 +-
 .../uib/cipr/matrix/UnitLowerTriangPackMatrix.java |   1 -
 .../uib/cipr/matrix/UnitUpperTriangBandMatrix.java |   5 +-
 .../cipr/matrix/UnitUpperTriangDenseMatrix.java    |  11 +-
 .../uib/cipr/matrix/UnitUpperTriangPackMatrix.java |   1 -
 src/main/java/no/uib/cipr/matrix/UpLo.java         |  19 +-
 .../no/uib/cipr/matrix/UpperSPDBandMatrix.java     |   4 +-
 .../no/uib/cipr/matrix/UpperSymmBandMatrix.java    |   5 +-
 .../no/uib/cipr/matrix/UpperSymmDenseMatrix.java   |   1 -
 .../no/uib/cipr/matrix/UpperSymmPackMatrix.java    |   1 -
 .../no/uib/cipr/matrix/UpperTriangBandMatrix.java  |   9 +-
 .../no/uib/cipr/matrix/UpperTriangDenseMatrix.java |  15 +-
 .../no/uib/cipr/matrix/UpperTriangPackMatrix.java  |   1 -
 src/main/java/no/uib/cipr/matrix/Vector.java       |  15 +-
 .../java/no/uib/cipr/matrix/io/MatrixInfo.java     |   4 +-
 .../no/uib/cipr/matrix/io/MatrixVectorReader.java  |   1 -
 .../no/uib/cipr/matrix/io/MatrixVectorWriter.java  |  39 +-
 .../java/no/uib/cipr/matrix/io/VectorInfo.java     |   4 +-
 src/main/java/no/uib/cipr/matrix/overview.html     |   2 +-
 src/main/java/no/uib/cipr/matrix/sparse/AMG.java   |   8 +-
 .../java/no/uib/cipr/matrix/sparse/ArpackSym.java  | 266 +++----
 .../java/no/uib/cipr/matrix/sparse/Arrays.java     |   4 +-
 .../java/no/uib/cipr/matrix/sparse/BiCGstab.java   |   6 +-
 .../java/no/uib/cipr/matrix/sparse/Chebyshev.java  |  47 +-
 .../no/uib/cipr/matrix/sparse/CompRowMatrix.java   |  72 +-
 src/main/java/no/uib/cipr/matrix/sparse/ILUT.java  |   4 +-
 .../no/uib/cipr/matrix/sparse/ISparseVector.java   |  16 +-
 .../no/uib/cipr/matrix/sparse/IterativeSolver.java |   4 +-
 .../uib/cipr/matrix/sparse/LinkedSparseMatrix.java | 765 +++++++++++----------
 .../no/uib/cipr/matrix/sparse/SparseVector.java    |  67 +-
 .../no/uib/cipr/matrix/sparse/SuperIterator.java   |   5 +-
 .../cipr/matrix/sparse/LinkedSparseMatrixPerf.R    |   6 +-
 .../java/no/uib/cipr/matrix/DenseCholeskyTest.java |   2 +-
 src/test/java/no/uib/cipr/matrix/DenseLUTest.java  | 175 +++--
 .../java/no/uib/cipr/matrix/DenseMatrixTest.java   |  55 +-
 .../no/uib/cipr/matrix/DenseVectorSubTest.java     |  22 +-
 .../no/uib/cipr/matrix/MatrixTestAbstract.java     |  73 +-
 .../no/uib/cipr/matrix/PermutationMatrixTest.java  |  93 +--
 src/test/java/no/uib/cipr/matrix/QRPTest.java      | 274 ++++----
 .../java/no/uib/cipr/matrix/SingularvalueTest.java |   5 +-
 .../matrix/StructImmutableMatrixTestAbstract.java  |   4 +-
 .../no/uib/cipr/matrix/SymmBandEigenvalueTest.java |   4 +
 .../cipr/matrix/SymmetricMatrixTestAbstract.java   |   4 +-
 .../uib/cipr/matrix/TriangMatrixTestAbstract.java  |   4 +-
 .../matrix/UnitLowerTriangDenseMatrixTest.java     |  34 +-
 .../cipr/matrix/UnitTriangMatrixTestAbstract.java  |   4 +-
 .../matrix/UnitUpperTriangDenseMatrixTest.java     |   4 +-
 src/test/java/no/uib/cipr/matrix/Utilities.java    |  18 +-
 .../no/uib/cipr/matrix/io/MatrixVectorIoTest.java  |  83 ++-
 .../no/uib/cipr/matrix/sparse/ArpackSymTest.java   |  98 +--
 .../java/no/uib/cipr/matrix/sparse/ILUTTest.java   |  28 +-
 .../cipr/matrix/sparse/LinkedSparseMatrixTest.java | 363 +++++-----
 .../sparse/SPDIterativeSolverTestAbstract.java     |   4 +-
 .../SparseStructImmutableMatrixTestAbstract.java   |   5 +-
 .../uib/cipr/matrix/sparse/SparseVectorTest.java   | 160 +++--
 .../test/resources/logging.properties              |   0
 115 files changed, 2867 insertions(+), 2267 deletions(-)

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