[libmtj-java] branch master updated (0eb9f6f -> b7b2fc7)
Andreas Tille
tille at debian.org
Fri May 20 19:10:12 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch master
in repository libmtj-java.
from 0eb9f6f Add maven artifacts file from http://search.maven.org/#search|ga|1|mtj
new 738a57c Revert to old state of 0.9.14+dfsg-2
adds 34e6be0 Imported Upstream version 0.9.14+dfsg
new b7b2fc7 Merge tag 'upstream/0.9.14+dfsg'
The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.check-diff.sh | 7 -
.formatting.xml | 8 -
.gitignore | 10 -
.settings.xml | 12 -
.travis.yml | 27 -
LICENSE | 165 ---
README.md | 113 ---
build.xml | 19 +
debian/changelog | 17 -
debian/control | 26 +-
debian/copyright | 5 +
debian/get-orig-source | 37 +
debian/libmtj-java.poms | 28 -
debian/libmtj-java.substvars | 8 -
debian/maven.cleanIgnoreRules | 1 -
debian/maven.ignoreRules | 2 -
debian/maven.publishedRules | 1 -
debian/maven.rules | 3 -
debian/mtj-maven-1.0.4.pom | 241 -----
.../patches/0002-use_netlib_java_debian_lib.patch | 382 -------
debian/patches/series | 2 +-
debian/patches/use_debian_jar_files.patch | 21 +
debian/rules | 11 +-
debian/watch | 5 +-
lib/nblibraries.properties | 7 +
manifest.mf | 3 +
nbproject/build-impl.xml | 1066 ++++++++++++++++++++
nbproject/genfiles.properties | 8 +
nbproject/private/config.properties | 0
nbproject/private/private.properties | 9 +
nbproject/private/private.xml | 4 +
nbproject/project.properties | 66 ++
nbproject/project.xml | 19 +
pom.xml | 241 -----
.../java/no/uib/cipr/matrix/DenseVectorSub.java | 47 -
src/main/java/no/uib/cipr/matrix/JobSVD.java | 63 --
.../java/no/uib/cipr/matrix/PermutationMatrix.java | 123 ---
src/main/java/no/uib/cipr/matrix/QRP.java | 239 -----
.../java/no/uib/cipr/matrix/sparse/ArpackSym.java | 166 ---
.../uib/cipr/matrix/sparse/LinkedSparseMatrix.java | 470 ---------
.../no/uib/cipr/matrix/AbstractBandMatrix.java | 0
.../no/uib/cipr/matrix/AbstractDenseMatrix.java | 38 +-
.../no/uib/cipr/matrix/AbstractMatrix.java | 41 +-
.../no/uib/cipr/matrix/AbstractPackMatrix.java | 0
.../no/uib/cipr/matrix/AbstractSymmBandMatrix.java | 11 +-
.../uib/cipr/matrix/AbstractSymmDenseMatrix.java | 49 +-
.../no/uib/cipr/matrix/AbstractSymmPackMatrix.java | 10 +-
.../uib/cipr/matrix/AbstractTriangBandMatrix.java | 18 +-
.../uib/cipr/matrix/AbstractTriangDenseMatrix.java | 40 +-
.../uib/cipr/matrix/AbstractTriangPackMatrix.java | 20 +-
.../no/uib/cipr/matrix/AbstractVector.java | 16 +-
.../java => }/no/uib/cipr/matrix/BandCholesky.java | 30 +-
src/{main/java => }/no/uib/cipr/matrix/BandLU.java | 11 +-
.../java => }/no/uib/cipr/matrix/BandMatrix.java | 20 +-
.../no/uib/cipr/matrix/DenseCholesky.java | 6 +-
.../java => }/no/uib/cipr/matrix/DenseLU.java | 35 +-
.../java => }/no/uib/cipr/matrix/DenseMatrix.java | 85 +-
.../java => }/no/uib/cipr/matrix/DenseVector.java | 10 +-
src/{main/java => }/no/uib/cipr/matrix/Diag.java | 25 +-
src/{main/java => }/no/uib/cipr/matrix/EVD.java | 19 +-
.../no/uib/cipr/matrix/GivensRotation.java | 0
src/{main/java => }/no/uib/cipr/matrix/JobEig.java | 27 +-
.../java => }/no/uib/cipr/matrix/JobEigRange.java | 39 +-
src/no/uib/cipr/matrix/JobSVD.java | 62 ++
src/{main/java => }/no/uib/cipr/matrix/LQ.java | 18 +-
.../no/uib/cipr/matrix/LowerSPDBandMatrix.java | 4 +-
.../no/uib/cipr/matrix/LowerSPDDenseMatrix.java | 0
.../no/uib/cipr/matrix/LowerSPDPackMatrix.java | 0
.../no/uib/cipr/matrix/LowerSymmBandMatrix.java | 9 +-
.../no/uib/cipr/matrix/LowerSymmDenseMatrix.java | 1 +
.../no/uib/cipr/matrix/LowerSymmPackMatrix.java | 1 +
.../no/uib/cipr/matrix/LowerTriangBandMatrix.java | 12 +-
.../no/uib/cipr/matrix/LowerTriangDenseMatrix.java | 24 +-
.../no/uib/cipr/matrix/LowerTriangPackMatrix.java | 1 +
.../java => }/no/uib/cipr/matrix/Matrices.java | 83 +-
src/{main/java => }/no/uib/cipr/matrix/Matrix.java | 178 ++--
.../java => }/no/uib/cipr/matrix/MatrixEntry.java | 0
.../no/uib/cipr/matrix/MatrixNotSPDException.java | 0
.../uib/cipr/matrix/MatrixSingularException.java | 0
.../no/uib/cipr/matrix/NotConvergedException.java | 0
.../no/uib/cipr/matrix/OrthogonalComputer.java | 0
.../java => }/no/uib/cipr/matrix/PackCholesky.java | 16 +-
src/{main/java => }/no/uib/cipr/matrix/QL.java | 18 +-
src/{main/java => }/no/uib/cipr/matrix/QR.java | 18 +-
src/no/uib/cipr/matrix/QRP.java | 224 ++++
src/{main/java => }/no/uib/cipr/matrix/RQ.java | 16 +-
.../no/uib/cipr/matrix/SPDTridiagMatrix.java | 6 +-
src/{main/java => }/no/uib/cipr/matrix/SVD.java | 25 +-
src/{main/java => }/no/uib/cipr/matrix/Side.java | 25 +-
.../java => }/no/uib/cipr/matrix/SymmBandEVD.java | 15 +-
.../java => }/no/uib/cipr/matrix/SymmDenseEVD.java | 20 +-
.../java => }/no/uib/cipr/matrix/SymmEVD.java | 1 +
.../java => }/no/uib/cipr/matrix/SymmPackEVD.java | 12 +-
.../no/uib/cipr/matrix/SymmTridiagEVD.java | 19 +-
.../no/uib/cipr/matrix/SymmTridiagMatrix.java | 6 +-
.../java => }/no/uib/cipr/matrix/Transpose.java | 25 +-
.../no/uib/cipr/matrix/TridiagMatrix.java | 11 +-
.../uib/cipr/matrix/UnitLowerTriangBandMatrix.java | 5 +-
.../cipr/matrix/UnitLowerTriangDenseMatrix.java | 11 +-
.../uib/cipr/matrix/UnitLowerTriangPackMatrix.java | 1 +
.../uib/cipr/matrix/UnitUpperTriangBandMatrix.java | 5 +-
.../cipr/matrix/UnitUpperTriangDenseMatrix.java | 11 +-
.../uib/cipr/matrix/UnitUpperTriangPackMatrix.java | 1 +
src/{main/java => }/no/uib/cipr/matrix/UpLo.java | 19 +-
.../no/uib/cipr/matrix/UpperSPDBandMatrix.java | 4 +-
.../no/uib/cipr/matrix/UpperSPDDenseMatrix.java | 0
.../no/uib/cipr/matrix/UpperSPDPackMatrix.java | 0
.../no/uib/cipr/matrix/UpperSymmBandMatrix.java | 5 +-
.../no/uib/cipr/matrix/UpperSymmDenseMatrix.java | 1 +
.../no/uib/cipr/matrix/UpperSymmPackMatrix.java | 1 +
.../no/uib/cipr/matrix/UpperTriangBandMatrix.java | 9 +-
.../no/uib/cipr/matrix/UpperTriangDenseMatrix.java | 8 +-
.../no/uib/cipr/matrix/UpperTriangPackMatrix.java | 1 +
src/{main/java => }/no/uib/cipr/matrix/Vector.java | 15 +-
.../java => }/no/uib/cipr/matrix/VectorEntry.java | 0
.../distributed/BlockDiagonalPreconditioner.java | 85 ++
.../distributed/CollectiveCommunications.java | 317 ++++++
.../uib/cipr/matrix/distributed/Communicator.java | 580 +++++++++++
.../uib/cipr/matrix/distributed/DistColMatrix.java | 246 +++++
src/no/uib/cipr/matrix/distributed/DistMatrix.java | 355 +++++++
.../uib/cipr/matrix/distributed/DistRowMatrix.java | 245 +++++
src/no/uib/cipr/matrix/distributed/DistVector.java | 339 +++++++
src/no/uib/cipr/matrix/distributed/Reduction.java | 137 +++
src/no/uib/cipr/matrix/distributed/Reductions.java | 554 ++++++++++
.../cipr/matrix/distributed}/SuperIterator.java | 17 +-
.../matrix/distributed/TwoLevelPreconditioner.java | 292 ++++++
.../uib/cipr/matrix/distributed/VectorScatter.java | 247 +++++
src/no/uib/cipr/matrix/distributed/package.html | 16 +
.../no/uib/cipr/matrix/io/MatrixInfo.java | 4 +-
.../no/uib/cipr/matrix/io/MatrixSize.java | 0
.../no/uib/cipr/matrix/io/MatrixVectorReader.java | 2 +-
.../no/uib/cipr/matrix/io/MatrixVectorWriter.java | 72 +-
.../no/uib/cipr/matrix/io/VectorInfo.java | 4 +-
.../no/uib/cipr/matrix/io/VectorSize.java | 0
.../java => }/no/uib/cipr/matrix/io/package.html | 0
.../java => }/no/uib/cipr/matrix/overview.html | 2 +-
.../java => }/no/uib/cipr/matrix/package.html | 0
.../java => }/no/uib/cipr/matrix/sparse/AMG.java | 8 +-
.../matrix/sparse/AbstractIterationMonitor.java | 0
.../matrix/sparse/AbstractIterativeSolver.java | 0
.../no/uib/cipr/matrix/sparse/Arrays.java | 19 +-
.../java => }/no/uib/cipr/matrix/sparse/BiCG.java | 0
.../no/uib/cipr/matrix/sparse/BiCGstab.java | 8 +-
.../java => }/no/uib/cipr/matrix/sparse/CG.java | 0
.../java => }/no/uib/cipr/matrix/sparse/CGS.java | 0
.../no/uib/cipr/matrix/sparse/Chebyshev.java | 47 +-
.../no/uib/cipr/matrix/sparse/CompColMatrix.java | 0
.../no/uib/cipr/matrix/sparse/CompDiagMatrix.java | 0
.../no/uib/cipr/matrix/sparse/CompRowMatrix.java | 74 +-
.../matrix/sparse/DefaultIterationMonitor.java | 0
.../cipr/matrix/sparse/DiagonalPreconditioner.java | 0
.../uib/cipr/matrix/sparse/FlexCompColMatrix.java | 0
.../uib/cipr/matrix/sparse/FlexCompRowMatrix.java | 0
.../java => }/no/uib/cipr/matrix/sparse/GMRES.java | 0
.../java => }/no/uib/cipr/matrix/sparse/ICC.java | 0
.../java => }/no/uib/cipr/matrix/sparse/ILU.java | 0
.../java => }/no/uib/cipr/matrix/sparse/ILUT.java | 4 +-
.../java => }/no/uib/cipr/matrix/sparse/IR.java | 0
.../no/uib/cipr/matrix/sparse/ISparseVector.java | 16 +-
.../uib/cipr/matrix/sparse/IterationMonitor.java | 0
.../uib/cipr/matrix/sparse/IterationReporter.java | 0
.../no/uib/cipr/matrix/sparse/IterativeSolver.java | 4 +-
.../IterativeSolverNotConvergedException.java | 0
.../cipr/matrix/sparse/MatrixIterationMonitor.java | 0
.../cipr/matrix/sparse/NoIterationReporter.java | 0
.../matrix/sparse/OutputIterationReporter.java | 0
.../no/uib/cipr/matrix/sparse/Preconditioner.java | 0
.../java => }/no/uib/cipr/matrix/sparse/QMR.java | 0
.../java => }/no/uib/cipr/matrix/sparse/SSOR.java | 0
.../no/uib/cipr/matrix/sparse/SparseVector.java | 67 +-
.../no/uib/cipr/matrix/sparse/SuperIterator.java | 5 +-
.../cipr/matrix/sparse/UnitLowerCompRowMatrix.java | 0
.../uib/cipr/matrix/sparse/UpperCompRowMatrix.java | 0
.../no/uib/cipr/matrix/sparse/package.html | 0
.../cipr/matrix/sparse/LinkedSparseMatrixPerf.R | 111 --
src/test/java/no/uib/cipr/matrix/DenseLUTest.java | 117 ---
.../no/uib/cipr/matrix/DenseVectorSubTest.java | 23 -
.../no/uib/cipr/matrix/PermutationMatrixTest.java | 65 --
src/test/java/no/uib/cipr/matrix/QRPTest.java | 193 ----
.../matrix/UnitLowerTriangDenseMatrixTest.java | 55 -
.../no/uib/cipr/matrix/io/MatrixVectorIoTest.java | 87 --
.../no/uib/cipr/matrix/sparse/ArpackSymTest.java | 84 --
.../java/no/uib/cipr/matrix/sparse/ILUTTest.java | 72 --
.../cipr/matrix/sparse/LinkedSparseMatrixTest.java | 217 ----
.../uib/cipr/matrix/sparse/SparseVectorTest.java | 164 ---
src/test/resources/logging.properties | 12 -
.../no/uib/cipr/matrix/BandCholeskyTest.java | 0
.../no/uib/cipr/matrix/BandLUTest.java | 0
.../no/uib/cipr/matrix/BandMatrixTest.java | 0
.../no/uib/cipr/matrix/DenseCholeskyTest.java | 2 +-
tests/no/uib/cipr/matrix/DenseLUTest.java | 168 +++
.../no/uib/cipr/matrix/DenseMatrixTest.java | 52 +-
.../no/uib/cipr/matrix/DenseVectorTest.java | 0
.../java => tests}/no/uib/cipr/matrix/LQTest.java | 0
.../no/uib/cipr/matrix/LowerSPDBandMatrixTest.java | 0
.../uib/cipr/matrix/LowerSPDDenseMatrixTest.java | 0
.../no/uib/cipr/matrix/LowerSPDPackMatrixTest.java | 0
.../uib/cipr/matrix/LowerSymmBandMatrixTest.java | 0
.../uib/cipr/matrix/LowerSymmDenseMatrixTest.java | 0
.../uib/cipr/matrix/LowerSymmPackMatrixTest.java | 0
.../uib/cipr/matrix/LowerTriangBandMatrixTest.java | 0
.../cipr/matrix/LowerTriangDenseMatrixTest.java | 0
.../uib/cipr/matrix/LowerTriangPackMatrixTest.java | 0
.../no/uib/cipr/matrix/MatrixTestAbstract.java | 67 +-
.../no/uib/cipr/matrix/OrthogonalTestAbstract.java | 0
.../no/uib/cipr/matrix/PackCholeskyTest.java | 0
.../java => tests}/no/uib/cipr/matrix/QLTest.java | 0
tests/no/uib/cipr/matrix/QRPTest.java | 181 ++++
.../java => tests}/no/uib/cipr/matrix/QRTest.java | 0
.../java => tests}/no/uib/cipr/matrix/RQTest.java | 0
.../no/uib/cipr/matrix/SPDTridiagMatrixTest.java | 0
.../no/uib/cipr/matrix/SingularvalueTest.java | 5 +-
.../no/uib/cipr/matrix/SquareDenseMatrixTest.java | 0
.../matrix/StructImmutableMatrixTestAbstract.java | 4 +-
.../no/uib/cipr/matrix/SymmBandEigenvalueTest.java | 4 -
.../uib/cipr/matrix/SymmDenseEigenvalueTest.java | 0
.../cipr/matrix/SymmEigenvalueTestAbstract.java | 0
.../no/uib/cipr/matrix/SymmPackEigenvalueTest.java | 0
.../uib/cipr/matrix/SymmTridiagEigenvalueTest.java | 0
.../no/uib/cipr/matrix/SymmTridiagMatrixTest.java | 0
.../cipr/matrix/SymmetricMatrixTestAbstract.java | 4 +-
.../uib/cipr/matrix/TriangMatrixTestAbstract.java | 4 +-
.../no/uib/cipr/matrix/TridiagMatrixTest.java | 0
.../cipr/matrix/UnitLowerTriangBandMatrixTest.java | 0
.../matrix/UnitLowerTriangDenseMatrixTest.java | 10 +-
.../cipr/matrix/UnitLowerTriangPackMatrixTest.java | 0
.../cipr/matrix/UnitTriangMatrixTestAbstract.java | 4 +-
.../cipr/matrix/UnitUpperTriangBandMatrixTest.java | 0
.../matrix/UnitUpperTriangDenseMatrixTest.java | 4 +-
.../cipr/matrix/UnitUpperTriangPackMatrixTest.java | 0
.../no/uib/cipr/matrix/UpperSPDBandMatrixTest.java | 0
.../uib/cipr/matrix/UpperSPDDenseMatrixTest.java | 0
.../no/uib/cipr/matrix/UpperSPDPackMatrixTest.java | 0
.../uib/cipr/matrix/UpperSymmBandMatrixTest.java | 0
.../uib/cipr/matrix/UpperSymmDenseMatrixTest.java | 0
.../uib/cipr/matrix/UpperSymmPackMatrixTest.java | 0
.../uib/cipr/matrix/UpperTriangBandMatrixTest.java | 0
.../cipr/matrix/UpperTriangDenseMatrixTest.java | 0
.../uib/cipr/matrix/UpperTriangPackMatrixTest.java | 0
.../no/uib/cipr/matrix/Utilities.java | 18 +-
.../no/uib/cipr/matrix/VectorTestAbstract.java | 0
.../cipr/matrix/distributed/CollectiveTest.java | 276 +++++
.../distributed/DistIterativeSolverTest.java | 543 ++++++++++
.../cipr/matrix/distributed/PointToPointTest.java | 161 +++
.../uib/cipr/matrix/sparse/BiCGDiagonalTest.java | 0
.../no/uib/cipr/matrix/sparse/BiCGILUTest.java | 0
.../no/uib/cipr/matrix/sparse/BiCGTest.java | 0
.../cipr/matrix/sparse/BiCGstabDiagonalTest.java | 0
.../uib/cipr/matrix/sparse/BiCGstabILUTTest.java | 0
.../no/uib/cipr/matrix/sparse/BiCGstabILUTest.java | 0
.../no/uib/cipr/matrix/sparse/BiCGstabTest.java | 0
.../no/uib/cipr/matrix/sparse/CGAMGTest.java | 0
.../no/uib/cipr/matrix/sparse/CGDiagonalTest.java | 0
.../no/uib/cipr/matrix/sparse/CGICCTest.java | 0
.../no/uib/cipr/matrix/sparse/CGSDiagonalTest.java | 0
.../no/uib/cipr/matrix/sparse/CGSILUTTest.java | 0
.../no/uib/cipr/matrix/sparse/CGSILUTest.java | 0
.../no/uib/cipr/matrix/sparse/CGSSORTest.java | 0
.../no/uib/cipr/matrix/sparse/CGSTest.java | 0
.../no/uib/cipr/matrix/sparse/CGTest.java | 0
.../uib/cipr/matrix/sparse/ChebyshevAMGTest.java | 0
.../cipr/matrix/sparse/ChebyshevDiagonalTest.java | 0
.../uib/cipr/matrix/sparse/ChebyshevICCTest.java | 0
.../uib/cipr/matrix/sparse/ChebyshevSSORTest.java | 0
.../no/uib/cipr/matrix/sparse/ChebyshevTest.java | 0
.../uib/cipr/matrix/sparse/CompColMatrixTest.java | 0
.../uib/cipr/matrix/sparse/CompDiagMatrixTest.java | 0
.../uib/cipr/matrix/sparse/CompRowMatrixTest.java | 0
.../cipr/matrix/sparse/FlexCompColMatrixTest.java | 0
.../cipr/matrix/sparse/FlexCompRowMatrixTest.java | 0
.../uib/cipr/matrix/sparse/GMRESDiagonalTest.java | 0
.../no/uib/cipr/matrix/sparse/GMRESILUTTest.java | 0
.../no/uib/cipr/matrix/sparse/GMRESILUTest.java | 0
.../no/uib/cipr/matrix/sparse/GMRESTest.java | 0
.../no/uib/cipr/matrix/sparse/ICCTest.java | 0
.../no/uib/cipr/matrix/sparse/ILUTTest.java | 11 +-
.../no/uib/cipr/matrix/sparse/ILUTest.java | 0
.../IncompleteFactorizationTestAbstract.java | 0
.../matrix/sparse/IterativeSolverTestAbstract.java | 0
.../no/uib/cipr/matrix/sparse/QMRDiagonalTest.java | 0
.../no/uib/cipr/matrix/sparse/QMRILUTTest.java | 0
.../no/uib/cipr/matrix/sparse/QMRILUTest.java | 0
.../no/uib/cipr/matrix/sparse/QMRTest.java | 0
.../sparse/SPDIterativeSolverTestAbstract.java | 4 +-
.../matrix/sparse/SparseMatrixTestAbstract.java | 0
.../SparseStructImmutableMatrixTestAbstract.java | 5 +-
.../uib/cipr/matrix/sparse/SparseVectorTest.java | 100 ++
287 files changed, 7189 insertions(+), 4583 deletions(-)
delete mode 100755 .check-diff.sh
delete mode 100644 .formatting.xml
delete mode 100644 .gitignore
delete mode 100644 .settings.xml
delete mode 100644 .travis.yml
delete mode 100644 LICENSE
delete mode 100644 README.md
create mode 100644 build.xml
create mode 100755 debian/get-orig-source
delete mode 100644 debian/libmtj-java.poms
delete mode 100644 debian/libmtj-java.substvars
delete mode 100644 debian/maven.cleanIgnoreRules
delete mode 100644 debian/maven.ignoreRules
delete mode 100644 debian/maven.publishedRules
delete mode 100644 debian/maven.rules
delete mode 100644 debian/mtj-maven-1.0.4.pom
delete mode 100644 debian/patches/0002-use_netlib_java_debian_lib.patch
create mode 100644 debian/patches/use_debian_jar_files.patch
create mode 100644 lib/nblibraries.properties
create mode 100644 manifest.mf
create mode 100644 nbproject/build-impl.xml
create mode 100644 nbproject/genfiles.properties
create mode 100644 nbproject/private/config.properties
create mode 100644 nbproject/private/private.properties
create mode 100644 nbproject/private/private.xml
create mode 100644 nbproject/project.properties
create mode 100644 nbproject/project.xml
delete mode 100644 pom.xml
delete mode 100644 src/main/java/no/uib/cipr/matrix/DenseVectorSub.java
delete mode 100644 src/main/java/no/uib/cipr/matrix/JobSVD.java
delete mode 100644 src/main/java/no/uib/cipr/matrix/PermutationMatrix.java
delete mode 100644 src/main/java/no/uib/cipr/matrix/QRP.java
delete mode 100644 src/main/java/no/uib/cipr/matrix/sparse/ArpackSym.java
delete mode 100644 src/main/java/no/uib/cipr/matrix/sparse/LinkedSparseMatrix.java
rename src/{main/java => }/no/uib/cipr/matrix/AbstractBandMatrix.java (100%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractDenseMatrix.java (72%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractMatrix.java (97%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractPackMatrix.java (100%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractSymmBandMatrix.java (96%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractSymmDenseMatrix.java (87%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractSymmPackMatrix.java (96%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractTriangBandMatrix.java (91%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractTriangDenseMatrix.java (89%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractTriangPackMatrix.java (93%)
rename src/{main/java => }/no/uib/cipr/matrix/AbstractVector.java (96%)
rename src/{main/java => }/no/uib/cipr/matrix/BandCholesky.java (91%)
rename src/{main/java => }/no/uib/cipr/matrix/BandLU.java (96%)
rename src/{main/java => }/no/uib/cipr/matrix/BandMatrix.java (95%)
rename src/{main/java => }/no/uib/cipr/matrix/DenseCholesky.java (97%)
rename src/{main/java => }/no/uib/cipr/matrix/DenseLU.java (87%)
rename src/{main/java => }/no/uib/cipr/matrix/DenseMatrix.java (85%)
rename src/{main/java => }/no/uib/cipr/matrix/DenseVector.java (98%)
rename src/{main/java => }/no/uib/cipr/matrix/Diag.java (73%)
rename src/{main/java => }/no/uib/cipr/matrix/EVD.java (90%)
rename src/{main/java => }/no/uib/cipr/matrix/GivensRotation.java (100%)
rename src/{main/java => }/no/uib/cipr/matrix/JobEig.java (73%)
rename src/{main/java => }/no/uib/cipr/matrix/JobEigRange.java (63%)
create mode 100644 src/no/uib/cipr/matrix/JobSVD.java
rename src/{main/java => }/no/uib/cipr/matrix/LQ.java (91%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSPDBandMatrix.java (98%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSPDDenseMatrix.java (100%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSPDPackMatrix.java (100%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSymmBandMatrix.java (95%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSymmDenseMatrix.java (99%)
rename src/{main/java => }/no/uib/cipr/matrix/LowerSymmPackMatrix.java (99%)
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delete mode 100644 src/test/resources/logging.properties
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rename {src/test/java => tests}/no/uib/cipr/matrix/BandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/DenseCholeskyTest.java (99%)
create mode 100644 tests/no/uib/cipr/matrix/DenseLUTest.java
rename {src/test/java => tests}/no/uib/cipr/matrix/DenseMatrixTest.java (57%)
rename {src/test/java => tests}/no/uib/cipr/matrix/DenseVectorTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LQTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSPDBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSPDDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSPDPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSymmBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSymmDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerSymmPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerTriangBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerTriangDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/LowerTriangPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/MatrixTestAbstract.java (95%)
rename {src/test/java => tests}/no/uib/cipr/matrix/OrthogonalTestAbstract.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/PackCholeskyTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/QLTest.java (100%)
create mode 100644 tests/no/uib/cipr/matrix/QRPTest.java
rename {src/test/java => tests}/no/uib/cipr/matrix/QRTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/RQTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SPDTridiagMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SingularvalueTest.java (93%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SquareDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/StructImmutableMatrixTestAbstract.java (96%)
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rename {src/test/java => tests}/no/uib/cipr/matrix/SymmDenseEigenvalueTest.java (100%)
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rename {src/test/java => tests}/no/uib/cipr/matrix/SymmPackEigenvalueTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SymmTridiagEigenvalueTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SymmTridiagMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/SymmetricMatrixTestAbstract.java (94%)
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rename {src/test/java => tests}/no/uib/cipr/matrix/TridiagMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitLowerTriangBandMatrixTest.java (100%)
copy src/test/java/no/uib/cipr/matrix/UnitLowerTriangPackMatrixTest.java => tests/no/uib/cipr/matrix/UnitLowerTriangDenseMatrixTest.java (79%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitLowerTriangPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitTriangMatrixTestAbstract.java (95%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitUpperTriangBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitUpperTriangDenseMatrixTest.java (92%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UnitUpperTriangPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSPDBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSPDDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSPDPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSymmBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSymmDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperSymmPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperTriangBandMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperTriangDenseMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/UpperTriangPackMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/Utilities.java (97%)
rename {src/test/java => tests}/no/uib/cipr/matrix/VectorTestAbstract.java (100%)
create mode 100644 tests/no/uib/cipr/matrix/distributed/CollectiveTest.java
create mode 100644 tests/no/uib/cipr/matrix/distributed/DistIterativeSolverTest.java
create mode 100644 tests/no/uib/cipr/matrix/distributed/PointToPointTest.java
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGstabDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGstabILUTTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGstabILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/BiCGstabTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGAMGTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGICCTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGSDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGSILUTTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGSILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGSSORTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGSTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CGTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ChebyshevAMGTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ChebyshevDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ChebyshevICCTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ChebyshevSSORTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ChebyshevTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CompColMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CompDiagMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/CompRowMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/FlexCompColMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/FlexCompRowMatrixTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/GMRESDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/GMRESILUTTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/GMRESILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/GMRESTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ICCTest.java (100%)
copy src/test/java/no/uib/cipr/matrix/sparse/ILUTest.java => tests/no/uib/cipr/matrix/sparse/ILUTTest.java (85%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/ILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/IncompleteFactorizationTestAbstract.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/IterativeSolverTestAbstract.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/QMRDiagonalTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/QMRILUTTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/QMRILUTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/QMRTest.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/SPDIterativeSolverTestAbstract.java (93%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/SparseMatrixTestAbstract.java (100%)
rename {src/test/java => tests}/no/uib/cipr/matrix/sparse/SparseStructImmutableMatrixTestAbstract.java (92%)
create mode 100644 tests/no/uib/cipr/matrix/sparse/SparseVectorTest.java
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