[Git][java-team/openchemlib][master] Update debian/copyright according to the output of licensecheck. Apparently,...

Fri Apr 11 07:54:49 BST 2025


Andrius Merkys pushed to branch master at Debian Java Maintainers / openchemlib


Commits:
3b85e05e by Andrius Merkys at 2025-04-11T09:54:22+03:00
Update debian/copyright according to the output of licensecheck. Apparently, there is at least one instance of non-free license usage.

- - - - -


1 changed file:

- debian/copyright


Changes:

=====================================
debian/copyright
=====================================
@@ -9,9 +9,103 @@ Files-Excluded:
  src/main/java/info
 
 Files: *
-Copyright: 1997-2023, Idorsia Pharmaceuticals Ltd, Hegenheimermattweg 91, CH-4123 Allschwil, Switzerland
+Copyright: 1997-2017, Actelion Pharmaceuticals Ltd.
 License: BSD-3-clause
 
+Files: ./src/main/java/com/actelion/research/calc/regression/ParameterRegressionMethod.java
+ ./src/main/java/com/actelion/research/calc/statistics/median/MedianStatisticFunctions.java
+ ./src/main/java/com/actelion/research/calc/statistics/median/ModelMedianFloat.java
+ ./src/main/java/com/actelion/research/calc/statistics/median/ModelMedianInteger.java
+ ./src/main/java/com/actelion/research/chem/descriptor/DescriptorHandlerFlexophore.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/IMolDistHist.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/MDHIndexTables.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/MolDistHistEncoder.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/PPNode.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/PPNodeViz.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/calculator/IntQueue.java
+ ./src/main/java/com/actelion/research/chem/docking/scoring/idoscore/InteractionTerm.java
+ ./src/main/java/com/actelion/research/chem/prediction/DruglikenessPredictorWithIndex.java
+ ./src/main/java/com/actelion/research/chem/prediction/IncrementTableWithIndex.java
+ ./src/main/java/com/actelion/research/chem/prediction/MolecularPropertyHelper.java
+ ./src/main/java/com/actelion/research/chem/reaction/Classification.java
+ ./src/main/java/com/actelion/research/gui/DefaultCompoundCollectionModel.java
+ ./src/main/java/com/actelion/research/gui/JMultiPanelTitle.java
+ ./src/main/java/com/actelion/research/gui/JProgressPanel.java
+ ./src/main/java/com/actelion/research/util/BinaryEncoder.java
+ ./src/main/java/com/actelion/research/util/ByteArrayArrayComparator.java
+ ./src/main/java/com/actelion/research/util/ScaleLabel.java
+ ./src/main/java/com/actelion/research/util/ScaleLabelCreator.java
+ ./src/main/java/com/actelion/research/util/datamodel/ModelXYIndexHelper.java
+Copyright: 1997-2022, Idorsia Pharmaceuticals Ltd.
+License: BSD-3-clause
+
+Files: ./src/main/java/org/openmolecules/chem/conf/gen/ConformerGenerator.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/RigidFragment.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/RigidFragmentCache.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/RigidFragmentProvider.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/RotatableBond.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSet.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSetEliminationRule.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSetStrategy.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSetStrategyAdaptiveRandom.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSetStrategyLikelySystematic.java
+ ./src/main/java/org/openmolecules/chem/conf/gen/TorsionSetStrategyRandom.java
+ ./src/main/java/org/openmolecules/chem/conf/so/AxialStereoRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/ConformationRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/ConformationSelfOrganizer.java
+ ./src/main/java/org/openmolecules/chem/conf/so/DistanceRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/PlaneRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/SelfOrganizedConformer.java
+ ./src/main/java/org/openmolecules/chem/conf/so/StraightLineRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/TetrahedralStereoRule.java
+ ./src/main/java/org/openmolecules/chem/conf/so/TorsionRule.java
+Copyright: 2013-2020, Thomas Sander, openmolecules.org
+License: BSD-3-clause
+
+Files: ./src/main/java/com/actelion/research/chem/CanonizerUtil.java
+ ./src/main/java/com/actelion/research/chem/DrawingObjectFactory.java
+ ./src/main/java/com/actelion/research/jfx/gui/chem/JFXCanvasDepictor.java
+ ./src/main/java/com/actelion/research/jfx/gui/chem/MoleculeView.java
+ ./src/main/java/com/actelion/research/share/gui/editor/actions/DownBondAction.java
+ ./src/main/java/com/actelion/research/share/gui/editor/actions/UpBondAction.java
+Copyright: 1997-2016
+License: BSD-3-clause
+ FIXME
+
+Files: ./src/main/java/com/actelion/research/chem/descriptor/DescriptorWeightsHelper.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/PPNodeVizMultCoord.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/generator/ExceptionTimeOutConformerGeneration.java
+ ./src/main/java/com/actelion/research/chem/descriptor/flexophore/generator/SubFlexophoreExtractorHelper.java
+Copyright: 2024, Alipheron AG.
+License: non-free
+
+Files: ./src/main/java/com/actelion/research/chem/reaction/RSSSearcher.java
+ ./src/main/java/com/actelion/research/chem/reaction/ReactionIndexer.java
+Copyright: 1997-2014, Actelion Pharmaceuticals Ltd.
+License: UNKNOWN
+ FIXME
+
+Files: ./src/main/java/com/actelion/research/calc/regression/svm/svm.java
+ ./src/main/java/org/machinelearning/svm/libsvm/COPYRIGHT
+Copyright: 2000-2018, Chih-Chung Chang and Chih-Jen Lin
+License: UNKNOWN
+ FIXME
+
+Files: ./src/main/java/com/actelion/research/util/AnimatedGIFWriter.java
+Copyright: 2014-2016, Wen Yu.
+License: EPL-1.0
+ FIXME
+
+Files: ./src/main/java/com/actelion/research/chem/shredder/MoleculeShredder.java
+Copyright: 1997-2001, Actelion Ltd., Inc.
+License: UNKNOWN
+ FIXME
+
+Files: ./src/main/java/com/actelion/research/util/Sketch.java
+Copyright: 2002, Company: Actelion Ltd.
+License: UNKNOWN
+ FIXME
+
 Files: src/main/java/com/actelion/research/chem/io/CDXMLParser.java
  src/main/java/com/actelion/research/chem/io/XmlReader.java
 Copyright: 2003-2005, Miguel, Jmol Development, www.jmol.org



View it on GitLab: https://salsa.debian.org/java-team/openchemlib/-/commit/3b85e05ec719286fd90f2f44cdbcc72e6106ed94

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