[debian-mysql] Bug#859800: jessie -> stretch upgrade with MySQL 5.5

Mon Apr 10 20:11:17 UTC 2017

Paul,

thanks, my E_TOO_MANY_EMAILS hit me again.  Seems like the error can be
safely ignored, and the real issue is the missing rundir.

So, couple more questions:

1. what init system does your NAS have after upgrade?
2. did you reboot the system between removing mysql-server-5.5 and
mariadb-server-10.0 (purging /var/run on tmpfs)?

Cheers,
-- 
Ondřej Surý <ondrej at sury.org>
Knot DNS (https://www.knot-dns.cz/) – a high-performance DNS server
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On Mon, Apr 10, 2017, at 22:05, Paul Gevers wrote:
> Oh, and I assume you take
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=859800 into account.
> That has an update with respect to my first e-mail.
> 
> Paul
> 
> On 04/10/17 22:00, Ondřej Surý wrote:
> > I spoke too soon. I see the aforementioned errors in the log file:
> > 
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Using mutexes to ref
> > count buffer pool pages
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: The InnoDB memory
> > heap is disabled
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Mutexes and rw_locks
> > use GCC atomic builtins
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: GCC builtin
> > __atomic_thread_fence() is used for memory barrier
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Compressed tables use
> > zlib 1.2.8
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Using Linux native
> > AIO
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Using SSE crc32
> > instructions
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Initializing buffer
> > pool, size = 128.0M
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Completed
> > initialization of buffer pool
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Highest supported
> > file format is Barracuda.
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Creating tablespace
> > and datafile system tables.
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Tablespace and
> > datafile system tables created.
> > 2017-04-10 19:48:36 140304128580992 [Warning] InnoDB: Resizing redo log
> > from 2*320 to 2*3072 pages, LSN=1600094
> > 2017-04-10 19:48:36 140304128580992 [Warning] InnoDB: Starting to delete
> > and rewrite log files.
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Setting log file
> > ./ib_logfile101 size to 48 MB
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Setting log file
> > ./ib_logfile1 size to 48 MB
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Renaming log file
> > ./ib_logfile101 to ./ib_logfile0
> > 2017-04-10 19:48:36 140304128580992 [Warning] InnoDB: New log files
> > created, LSN=1600524
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: 128 rollback
> > segment(s) are active.
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB: Waiting for purge to
> > start
> > 2017-04-10 19:48:36 140304128580992 [Note] InnoDB:  Percona XtraDB
> > (http://www.percona.com) 5.6.35-80.0 started; log sequence number
> > 1595685
> > 2017-04-10 19:48:36 140303495309056 [Note] InnoDB: Dumping buffer
> > pool(s) not yet started
> > 2017-04-10 19:48:36 140304075331328 [ERROR] Incorrect definition of
> > table mysql.proc: expected column 'sql_mode' at position 14 to have type
> > set('REAL_AS_FLOAT','PIPES_AS_CONCAT','ANSI_QUOTES','IGNORE_SPACE','IGNORE_BAD_TABLE_OPTIONS','ONLY_FULL_GROUP_BY','NO_UNSIGNED_SUBTRACTION','NO_DIR_IN_CREATE','POSTGRESQL','ORACLE','MSSQL','DB2','MAXDB','NO_KEY_OPTIONS','NO_TABLE_OPTIONS','NO_FIELD_OPTIONS','MYSQL323','MYSQL40','ANSI','NO_AUTO_VALUE_ON_ZERO','NO_BACKSLASH_ESCAPES','STRICT_TRANS_TABLES','STRICT_ALL_TABLES','NO_ZERO_IN_DATE','NO_ZERO_DATE','INVA
> > 2017-04-10 19:48:36 140304075331328 [ERROR] Incorrect definition of
> > table mysql.event: expected column 'sql_mode' at position 14 to have
> > type
> > set('REAL_AS_FLOAT','PIPES_AS_CONCAT','ANSI_QUOTES','IGNORE_SPACE','IGNORE_BAD_TABLE_OPTIONS','ONLY_FULL_GROUP_BY','NO_UNSIGNED_SUBTRACTION','NO_DIR_IN_CREATE','POSTGRESQL','ORACLE','MSSQL','DB2','MAXDB','NO_KEY_OPTIONS','NO_TABLE_OPTIONS','NO_FIELD_OPTIONS','MYSQL323','MYSQL40','ANSI','NO_AUTO_VALUE_ON_ZERO','NO_BACKSLASH_ESCAPES','STRICT_TRANS_TABLES','STRICT_ALL_TABLES','NO_ZERO_IN_DATE','NO_ZERO_DATE','INVALID_DATES','ERROR_FOR_DIVISION_BY_ZERO','TRADITIONAL','NO_AUTO_CREATE_USER','HIGH_NOT_PRECEDENCE','NO_ENGINE_SUBSTITUTION','PAD_CHAR_TO_FULL_LENGTH'),
> > found type
> > set('REAL_AS_FLOAT','PIPES_AS_CONCAT','ANSI_QUOTES','IGNORE_SPACE','NOT_USED','ONLY_FULL_GROUP_BY','NO_UNSIGNED_SUBTRACTION','NO_DIR_IN_CREATE','POSTGRESQL','ORACLE','MSSQL','DB2','MAXDB','NO_KEY_OPTIONS','NO_TABLE_OPTIONS','NO_FIELD_OPTIONS','MYSQL323','MYSQL40','ANSI','NO_AUTO_VALUE_ON_ZERO','NO_BACKSLASH_ESCAPES','STRICT_TRANS_TABLES','STRICT_A
> > ERROR: 1136  Column count doesn't match value count at row 1
> > 2017-04-10 19:48:36 140304128580992 [ERROR] Aborting
> > 
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Using mutexes to ref
> > count buffer pool pages
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: The InnoDB memory
> > heap is disabled
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Mutexes and rw_locks
> > use GCC atomic builtins
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: GCC builtin
> > __atomic_thread_fence() is used for memory barrier
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Compressed tables use
> > zlib 1.2.8
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Using Linux native
> > AIO
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Using SSE crc32
> > instructions
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Initializing buffer
> > pool, size = 128.0M
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Completed
> > initialization of buffer pool
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Highest supported
> > file format is Barracuda.
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: 128 rollback
> > segment(s) are active.
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB: Waiting for purge to
> > start
> > 2017-04-10 19:48:39 140567571205504 [Note] InnoDB:  Percona XtraDB
> > (http://www.percona.com) 5.6.35-80.0 started; log sequence number
> > 1616614
> > 2017-04-10 19:48:39 140566939551488 [Note] InnoDB: Dumping buffer
> > pool(s) not yet started
> > 2017-04-10 19:48:39 140567571205504 [Note] Plugin 'FEEDBACK' is
> > disabled.
> > 
> > But my mysqld process starts after that, unlike yours.
> > 
> > Cheers,
> > 
> 
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