Bug#1065759: Retitle libbio-samtools-perl: FTBFS on arm{el,hf}: lib/Bio/DB/Sam.xs:324:4: error: implicit declaration of function =?UTF-8?Q?=E2=80=98bam=5Fsort=5Fcore=E2=80=99; ?= did you mean ‘bam_format1_core’? [-Werror=implicit-function-declaration]

[Niko Tyni]

Control: tag -1 patch

On Tue, Mar 12, 2024 at 06:31:20PM +0100, Andreas Tille wrote:
 
> I can confirm that this bug also occures on amd64 thus removing the
> arm-restriction from the title.  Unfortunately I have no idea how to fix
> this (except by possibly suppressing the -Werror=implicit-function-declaration
> option).  Thus tagging 'help'

Looks like bam_view1() and bam_sort_core() don't have prototypes in
any header file in libbam-dev. Copying them from the actual .c files
in samtools-legacy seems to work.

Patch attached, this builds and passes the test suite for me.
-- 
Niko
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