Bug#1093338: libbio-eutilities-perl: FTBFS: Failed 8/20 test programs. 0/174 subtests failed.

Étienne Mollier emollier at debian.org
Tue Jan 21 18:49:11 GMT 2025


Control: tags -1 + confirmed
Control: forwarded -1 https://github.com/bioperl/Bio-EUtilities/issues/16

Greetings,

This looks to be the relevant part of the build log:
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_acheck.t ............ 
> 1..128
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 127/128 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_lcheck.t ............ 
> 1..62
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 61/62 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_llinks.t ............ 
> 1..84
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 83/84 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_ncheck.t ............ 
> 1..58
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 57/58 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_neighbor.t .......... 
> 1..61
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 60/61 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_neighbor_history.t .. 
> 1..63
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 62/63 subtests 
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_scores.t ............ 
> 1..56
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 55/56 subtests 

I had a look during today's LHF session but didn't really made
sense how to address the issue.  I had at least informed
upstream.  What bugs me is that neither the affected package nor
its direct dependencies have substancially changed recently.

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier <emollier at debian.org>
 : :' :  pgp: 8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
 `. `'   sent from /dev/pts/2, please excuse my verbosity
   `-    on air: Ozric Tentacles - Magick Valley
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 833 bytes
Desc: not available
URL: <http://alioth-lists.debian.net/pipermail/pkg-perl-maintainers/attachments/20250121/eee32455/attachment.sig>


More information about the pkg-perl-maintainers mailing list