Bug#1093338: libbio-eutilities-perl: FTBFS: Failed 8/20 test programs. 0/174 subtests failed.
Étienne Mollier
emollier at debian.org
Tue Jan 21 18:49:11 GMT 2025
Control: tags -1 + confirmed
Control: forwarded -1 https://github.com/bioperl/Bio-EUtilities/issues/16
Greetings,
This looks to be the relevant part of the build log:
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_acheck.t ............
> 1..128
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 127/128 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_lcheck.t ............
> 1..62
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 61/62 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_llinks.t ............
> 1..84
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 83/84 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_ncheck.t ............
> 1..58
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 57/58 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_neighbor.t ..........
> 1..61
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 60/61 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_neighbor_history.t ..
> 1..63
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 62/63 subtests
> choice/seq contains no opening bracket [Ln: 26, Col: 33]
> XML::Simple called at /<<PKGBUILDDIR>>/blib/lib/Bio/Tools/EUtilities.pm line 144.
> # Looks like your test exited with 255 just after 1.
> t/elink_scores.t ............
> 1..56
> ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link'
> Dubious, test returned 255 (wstat 65280, 0xff00)
> Failed 55/56 subtests
I had a look during today's LHF session but didn't really made
sense how to address the issue. I had at least informed
upstream. What bugs me is that neither the affected package nor
its direct dependencies have substancially changed recently.
Have a nice day, :)
--
.''`. Étienne Mollier <emollier at debian.org>
: :' : pgp: 8f91 b227 c7d6 f2b1 948c 8236 793c f67e 8f0d 11da
`. `' sent from /dev/pts/2, please excuse my verbosity
`- on air: Ozric Tentacles - Magick Valley
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