[DRE-maint] Bug#642035: FTBFS: ERROR: Test "ruby1.8" failed. Exiting.

[Laurent Fousse]

Package: ruby-bio
Version: 1.4.1-2
Severity: serious
Justification: fails to build from source

Hello,

Two tests failed, causing the package to FTBFS:

    
      1) Failure:
    test_esearch_retmax_retstart(Bio::FuncTestPubmedClassMethod) [./test/functional/bio/io/test_pubmed.rb:61]:
    The failure may be caused by changes of NCBI PubMed.
    <["21920989",
     "21921034",
     "21921041",
     "21921046",
     "21921327",
     "21921675",
     "21922137",
     "21922275",
     "21922390",
     "21922647"]> expected but was
    <["21903324",
     "21903368",
     "21903579",
     "21903592",
     "21903770",
     "21904072",
     "21904608",
     "21904639",
     "21904657",
     "21904777"]>.

      2) Failure:
    test_randomize_with_hash_equiprobability(Bio::TestSequenceCommon::TestSequenceCommonRandomize)
	[./test/unit/bio/sequence/test_common.rb:286:in `randomize_equiprobability'
	 ./test/unit/bio/sequence/test_common.rb:296:in `test_randomize_with_hash_equiprobability']:
    test of chi2 < 21.666 failed (25.0).
    <21.666> expected to be
    >
    <25.0>.

    3127 tests, 20469 assertions, 2 failures, 0 errors

Full build log attached.

Laurent.
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