[DRE-maint] Please help to upgrade ruby-bio

[Andreas Tille]

Hi,

I've commited an update of the latest upstream version to Git[1] but the
runtime tests end up in an error which is beyond my (non-existing) Ruby
knowledge:

...
===============================================================================
...............................................................................
........................................................E
===============================================================================
Error: test_na_seqstat(Bio::TestShellPluginSeq): ArgumentError: incomplete format specifier; use %% (double %) instead
/build/ruby-bio-1.5.1/lib/bio/shell/plugin/seq.rb:85:in `format'
/build/ruby-bio-1.5.1/lib/bio/shell/plugin/seq.rb:85:in `block in seqstat'
/build/ruby-bio-1.5.1/lib/bio/shell/plugin/seq.rb:84:in `each'
/build/ruby-bio-1.5.1/lib/bio/shell/plugin/seq.rb:84:in `seqstat'
/build/ruby-bio-1.5.1/test/unit/bio/shell/plugin/test_seq.rb:118:in `test_na_seqstat'
     115:           $str << obj.to_s
     116:         end
     117:       end
  => 118:       seqstat(naseq)
     119:       undef puts
     120:       alias puts puts_orig
     121:       assert_equal(output, $str)
===============================================================================
...


Feel free to simply upload if you found a fix to make this build.

Kind regards

      Andreas.


[1] https://salsa.debian.org/ruby-team/ruby-bio

-- 
http://fam-tille.de