[Python-modules-commits] [python-numpy] 09/12: merge patched into master
Sandro Tosi
morph at moszumanska.debian.org
Mon May 30 21:14:05 UTC 2016
This is an automated email from the git hooks/post-receive script.
morph pushed a commit to branch master
in repository python-numpy.
commit 371c729d981ce6c3769eeb2b7fc503f091e0e867
Merge: 6aa5061 3d9e219
Author: Sandro Tosi <morph at debian.org>
Date: Mon May 30 21:38:51 2016 +0100
merge patched into master
PKG-INFO | 2 +-
debian/.git-dpm | 6 +--
.../0005-Dont-fail-if-we-cant-import-mingw32.patch | 2 +-
...erts-on-ppc-with-broken-malloc-only-longd.patch | 2 +-
debian/patches/03_force_f2py_version.patch | 2 +-
.../10_use_local_python.org_object.inv_sphinx.diff | 2 +-
debian/patches/adapt_swig_docs_to_debian.patch | 2 +-
debian/patches/python3-soabi.patch | 2 +-
doc/release/1.11.1-notes.rst | 28 +++++++++++++
doc/source/release.rst | 1 +
numpy/core/src/multiarray/arraytypes.c.src | 7 ++++
numpy/core/src/multiarray/item_selection.c | 13 +++---
numpy/core/src/multiarray/mapping.c | 8 +++-
numpy/core/src/private/npy_config.h | 4 +-
numpy/core/tests/test_indexing.py | 14 +++++++
numpy/core/tests/test_multiarray.py | 9 +++++
numpy/distutils/fcompiler/intel.py | 4 +-
numpy/distutils/intelccompiler.py | 4 +-
numpy/distutils/npy_pkg_config.py | 10 ++---
numpy/distutils/system_info.py | 12 +++++-
numpy/distutils/tests/test_system_info.py | 36 ++++++++++++++---
numpy/lib/arraypad.py | 2 +-
numpy/lib/function_base.py | 19 +++++++--
numpy/lib/tests/test_arraypad.py | 13 ++++++
numpy/lib/tests/test_function_base.py | 18 ++++++++-
numpy/linalg/linalg.py | 4 +-
numpy/linalg/tests/test_regression.py | 46 ++++++++++++++++++++++
numpy/ma/core.py | 28 +++++++++----
numpy/ma/extras.py | 10 +++--
numpy/ma/tests/test_core.py | 17 ++++++++
numpy/ma/tests/test_extras.py | 13 ++++++
numpy/testing/utils.py | 8 +++-
numpy/version.py | 8 ++--
setup.py | 4 +-
site.cfg.example | 1 +
tools/swig/pyfragments.swg | 21 ++++++----
36 files changed, 311 insertions(+), 71 deletions(-)
diff --cc debian/.git-dpm
index eab47f6,0000000..202b7b4
mode 100644,000000..100644
--- a/debian/.git-dpm
+++ b/debian/.git-dpm
@@@ -1,11 -1,0 +1,11 @@@
+# see git-dpm(1) from git-dpm package
- c676a666c915a00d43b85c438fe9cd8f9bd31782
- c676a666c915a00d43b85c438fe9cd8f9bd31782
- 75d207b85a26d557d79cb3aab0b1d8cbb18c8f1e
++3d9e219574f45700e073728dcc0cb1be4afe3b37
++3d9e219574f45700e073728dcc0cb1be4afe3b37
++85990035f6289894f5812100e0aef3b91c354281
+85990035f6289894f5812100e0aef3b91c354281
+python-numpy_1.11.1~rc1.orig.tar.gz
+191a9aad0cfcf3539c9ee2a20f6fc1203a17c21e
+4172093
+debianTag="debian/%e%v"
+patchedTag="patched/%e%v"
+upstreamTag="upstream/%e%u"
diff --cc debian/patches/0005-Dont-fail-if-we-cant-import-mingw32.patch
index 08d12f7,0000000..61de94b
mode 100644,000000..100644
--- a/debian/patches/0005-Dont-fail-if-we-cant-import-mingw32.patch
+++ b/debian/patches/0005-Dont-fail-if-we-cant-import-mingw32.patch
@@@ -1,29 -1,0 +1,29 @@@
- From b8d77609b794aea3c7c33dd40c139a61ba4737fe Mon Sep 17 00:00:00 2001
++From 6cef64b9d478716b385b868a752b64bcad9b732a Mon Sep 17 00:00:00 2001
+From: Sandro Tosi <morph at debian.org>
+Date: Sun, 10 Jan 2016 22:16:03 +0000
+Subject: Dont fail if we cant import mingw32
+
+This is required for the Debian version helper, which reads core.setup_common and
+executes it, without using all the Python import machinery. This way we will
+skip the requirement to have the whole numpy module working while we only care
+(at this point) for the API/ABI versions.
+---
+ numpy/core/setup_common.py | 5 ++++-
+ 1 file changed, 4 insertions(+), 1 deletion(-)
+
+diff --git a/numpy/core/setup_common.py b/numpy/core/setup_common.py
+index ba7521e..764ad03 100644
+--- a/numpy/core/setup_common.py
++++ b/numpy/core/setup_common.py
+@@ -6,7 +6,10 @@ import warnings
+ import copy
+ import binascii
+
+-from numpy.distutils.misc_util import mingw32
++try:
++ from numpy.distutils.misc_util import mingw32
++except:
++ mingw32 = lambda *args, **kwargs: None
+
+
+ #-------------------
diff --cc debian/patches/0006-disable-asserts-on-ppc-with-broken-malloc-only-longd.patch
index 89b6fa3,0000000..321d4be
mode 100644,000000..100644
--- a/debian/patches/0006-disable-asserts-on-ppc-with-broken-malloc-only-longd.patch
+++ b/debian/patches/0006-disable-asserts-on-ppc-with-broken-malloc-only-longd.patch
@@@ -1,29 -1,0 +1,29 @@@
- From c676a666c915a00d43b85c438fe9cd8f9bd31782 Mon Sep 17 00:00:00 2001
++From 3d9e219574f45700e073728dcc0cb1be4afe3b37 Mon Sep 17 00:00:00 2001
+From: Sandro Tosi <morph at debian.org>
+Date: Mon, 11 Jan 2016 23:51:23 +0000
+Subject: disable asserts on ppc with broken malloc only longdouble affected
+ will still work with softfaults
+
+Author: Julian Taylor <jtaylor.debian at googlemail.com>
+---
+ numpy/core/src/multiarray/lowlevel_strided_loops.c.src | 7 +++++++
+ 1 file changed, 7 insertions(+)
+
+diff --git a/numpy/core/src/multiarray/lowlevel_strided_loops.c.src b/numpy/core/src/multiarray/lowlevel_strided_loops.c.src
+index 0fe63c1..34e7a74 100644
+--- a/numpy/core/src/multiarray/lowlevel_strided_loops.c.src
++++ b/numpy/core/src/multiarray/lowlevel_strided_loops.c.src
+@@ -7,6 +7,13 @@
+ *
+ * See LICENSE.txt for the license.
+ */
++#if defined(__powerpc__) & !defined(__powerpc64__)
++#ifndef NDEBUG
++// disable asserts malloc broken
++// https://sourceware.org/bugzilla/show_bug.cgi?id=6527
++#define NDEBUG
++#endif
++#endif
+
+ #define PY_SSIZE_T_CLEAN
+ #include "Python.h"
diff --cc debian/patches/03_force_f2py_version.patch
index 0bd957f,0000000..c2f2308
mode 100644,000000..100644
--- a/debian/patches/03_force_f2py_version.patch
+++ b/debian/patches/03_force_f2py_version.patch
@@@ -1,23 -1,0 +1,23 @@@
- From 486358c607772ce424933df7455eafb2f0af9f35 Mon Sep 17 00:00:00 2001
++From ca84616f275ec932cb03d5f3b31133d3ebb92f28 Mon Sep 17 00:00:00 2001
+From: SVN-Git Migration <python-modules-team at lists.alioth.debian.org>
+Date: Sun, 11 Oct 2015 10:12:15 -0700
+Subject: force generation f2py postfixed with interpreter version
+
+Patch-Name: 03_force_f2py_version.patch
+---
+ numpy/f2py/setup.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/numpy/f2py/setup.py b/numpy/f2py/setup.py
+index 3204129..0ca45ec 100644
+--- a/numpy/f2py/setup.py
++++ b/numpy/f2py/setup.py
+@@ -55,7 +55,7 @@ def configuration(parent_package='', top_path=None):
+ config.make_svn_version_py()
+
+ def generate_f2py_py(build_dir):
+- f2py_exe = 'f2py' + os.path.basename(sys.executable)[6:]
++ f2py_exe = 'f2py'+sys.version[:3]
+ if f2py_exe[-4:] == '.exe':
+ f2py_exe = f2py_exe[:-4] + '.py'
+ if 'bdist_wininst' in sys.argv and f2py_exe[-3:] != '.py':
diff --cc debian/patches/10_use_local_python.org_object.inv_sphinx.diff
index 4c3801d,0000000..d5264e7
mode 100644,000000..100644
--- a/debian/patches/10_use_local_python.org_object.inv_sphinx.diff
+++ b/debian/patches/10_use_local_python.org_object.inv_sphinx.diff
@@@ -1,24 -1,0 +1,24 @@@
- From 97545fcb603aaeef342f77cf90d3b446ae6ef953 Mon Sep 17 00:00:00 2001
++From e4168f61fa843ce6657fa0e3c9c8d7b8f6c3d544 Mon Sep 17 00:00:00 2001
+From: SVN-Git Migration <python-modules-team at lists.alioth.debian.org>
+Date: Sun, 11 Oct 2015 10:12:16 -0700
+Subject: Use a local copy of object.inv from doc.python.org, instead of
+ downloading it each time from the internet
+
+Patch-Name: 10_use_local_python.org_object.inv_sphinx.diff
+---
+ doc/source/conf.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/doc/source/conf.py b/doc/source/conf.py
+index 3324982..6ddeafe 100644
+--- a/doc/source/conf.py
++++ b/doc/source/conf.py
+@@ -199,7 +199,7 @@ texinfo_documents = [
+ # -----------------------------------------------------------------------------
+ # Intersphinx configuration
+ # -----------------------------------------------------------------------------
+-intersphinx_mapping = {'http://docs.python.org/dev': None}
++intersphinx_mapping = {'http://docs.python.org/dev': '../../debian/python.org_objects.inv'}
+
+
+ # -----------------------------------------------------------------------------
diff --cc debian/patches/adapt_swig_docs_to_debian.patch
index 27a6f8a,0000000..b04e0bf
mode 100644,000000..100644
--- a/debian/patches/adapt_swig_docs_to_debian.patch
+++ b/debian/patches/adapt_swig_docs_to_debian.patch
@@@ -1,45 -1,0 +1,45 @@@
- From fdd730ce66cbad8163f57b8fc8c7ab647143d84e Mon Sep 17 00:00:00 2001
++From 8da9e2f881cf92099d254f47b0cb6e871959438d Mon Sep 17 00:00:00 2001
+From: Sandro Tosi <morph at debian.org>
+Date: Sun, 11 Oct 2015 10:12:18 -0700
+Subject: Adapt SWIG documentation to Debian
+
+ Location of `swig` directory in Debian is specific to our distro, so the
+ documentation needs adaptation.
+Origin: vendor
+Forwarded: not-needed
+Last-Update: 2015-02-08
+Patch-Name: adapt_swig_docs_to_debian.patch
+---
+ doc/source/reference/swig.interface-file.rst | 4 ++--
+ doc/source/reference/swig.testing.rst | 3 ++-
+ 2 files changed, 4 insertions(+), 3 deletions(-)
+
+diff --git a/doc/source/reference/swig.interface-file.rst b/doc/source/reference/swig.interface-file.rst
+index e5d369d..61db829 100644
+--- a/doc/source/reference/swig.interface-file.rst
++++ b/doc/source/reference/swig.interface-file.rst
+@@ -166,8 +166,8 @@ assignments in lines 19 and 20.
+ Using numpy.i
+ -------------
+
+-The ``numpy.i`` file is currently located in the ``tools/swig``
+-sub-directory under the ``numpy`` installation directory. Typically,
++The ``numpy.i`` file is currently located in the ``swig``
++sub-directory in the ``python-numpy-doc`` package directory. Typically,
+ you will want to copy it to the directory where you are developing
+ your wrappers.
+
+diff --git a/doc/source/reference/swig.testing.rst b/doc/source/reference/swig.testing.rst
+index 13642a5..7c9d152 100644
+--- a/doc/source/reference/swig.testing.rst
++++ b/doc/source/reference/swig.testing.rst
+@@ -11,7 +11,8 @@ for a total of 888 typemaps supported "out of the box". Each of these
+ typemaps, in turn, might require several unit tests in order to verify
+ expected behavior for both proper and improper inputs. Currently,
+ this results in more than 1,000 individual unit tests executed when
+-``make test`` is run in the ``numpy/tools/swig`` subdirectory.
++``make test`` is run in the ``swig`` directory of ``python-numpy-doc``
++package.
+
+ To facilitate this many similar unit tests, some high-level
+ programming techniques are employed, including C and `SWIG`_ macros,
diff --cc debian/patches/python3-soabi.patch
index b65231d,0000000..8d03f73
mode 100644,000000..100644
--- a/debian/patches/python3-soabi.patch
+++ b/debian/patches/python3-soabi.patch
@@@ -1,48 -1,0 +1,48 @@@
- From 89d0a4161276f29cafd7155e735c52c1777692f8 Mon Sep 17 00:00:00 2001
++From 64ce383748416d211147feda84c61fefea2c5c42 Mon Sep 17 00:00:00 2001
+From: Julian Taylor <jtaylor at ubuntu.com>
+Date: Sun, 11 Oct 2015 10:12:17 -0700
+Subject: adapt to python3 multiarch soabi
+
+ python3 soabi contains multiarch but does not export it via SOABI. So hardcode
+ it and disable a test. get_shared_lib_extension can't be properly fixed:
+ doko: we still want this as the default for people building extensions not
+ only for the distribution
+ Nothing in debian uses it to get the python extension.
+Forwarded: not-needed, debian specific
+Patch-Name: python3-soabi.patch
+---
+ numpy/ctypeslib.py | 8 ++++++++
+ numpy/tests/test_ctypeslib.py | 1 +
+ 2 files changed, 9 insertions(+)
+
+diff --git a/numpy/ctypeslib.py b/numpy/ctypeslib.py
+index fa1dcad..d299e18 100644
+--- a/numpy/ctypeslib.py
++++ b/numpy/ctypeslib.py
+@@ -134,6 +134,14 @@ else:
+ so_ext2 = get_shared_lib_extension(is_python_ext=True)
+ if not so_ext2 == so_ext:
+ libname_ext.insert(0, libname + so_ext2)
++ try:
++ import sysconfig
++ so_ext3 = '.%s-%s.so' % (sysconfig.get_config_var('SOABI'),
++ sysconfig.get_config_var('MULTIARCH'))
++ libname_ext.insert(0, libname + so_ext3)
++ except (KeyError, ImportError):
++ pass
++
+ else:
+ libname_ext = [libname]
+
+diff --git a/numpy/tests/test_ctypeslib.py b/numpy/tests/test_ctypeslib.py
+index 5e888eb..9e7fc2d 100644
+--- a/numpy/tests/test_ctypeslib.py
++++ b/numpy/tests/test_ctypeslib.py
+@@ -27,6 +27,7 @@ class TestLoadLibrary(TestCase):
+ " (import error was: %s)" % str(e))
+ print(msg)
+
++ @dec.skipif(True, 'Skipped as per debian/patches/python3-soabi.patch')
+ @dec.skipif(not _HAS_CTYPE,
+ "ctypes not available on this python installation")
+ @dec.knownfailureif(sys.platform ==
--
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