[Python-modules-commits] [python-scipy] 01/02: New upstream version 0.18.1
Sebastian Humenda
moomoc-guest at moszumanska.debian.org
Sat Sep 24 17:01:34 UTC 2016
This is an automated email from the git hooks/post-receive script.
moomoc-guest pushed a commit to branch master
in repository python-scipy.
commit c03f609a8b81e76426e35153cda78c8e6f3bf647
Author: Sebastian Humenda <shumenda at gmx.de>
Date: Sat Sep 24 19:00:03 2016 +0200
New upstream version 0.18.1
---
.coveragerc | 3 +
.gitattributes | 55 +
.gitignore | 220 +
.gitmodules | 6 +
.travis.yml | 179 +
PKG-INFO | 48 -
README.rst | 92 +
benchmarks/README.rst | 75 +
benchmarks/asv.conf.json | 69 +
benchmarks/benchmarks/__init__.py | 5 +
benchmarks/benchmarks/cluster.py | 21 +
benchmarks/benchmarks/common.py | 99 +
benchmarks/benchmarks/fftpack_basic.py | 112 +
benchmarks/benchmarks/fftpack_pseudo_diffs.py | 102 +
.../benchmarks/go_benchmark_functions/__init__.py | 73 +
.../go_benchmark_functions/go_benchmark.py | 211 +
.../go_benchmark_functions/go_funcs_A.py | 281 +
.../go_benchmark_functions/go_funcs_B.py | 761 +
.../go_benchmark_functions/go_funcs_C.py | 592 +
.../go_benchmark_functions/go_funcs_D.py | 582 +
.../go_benchmark_functions/go_funcs_E.py | 306 +
.../go_benchmark_functions/go_funcs_F.py | 46 +
.../go_benchmark_functions/go_funcs_G.py | 224 +
.../go_benchmark_functions/go_funcs_H.py | 378 +
.../go_benchmark_functions/go_funcs_I.py | 43 +
.../go_benchmark_functions/go_funcs_J.py | 111 +
.../go_benchmark_functions/go_funcs_K.py | 151 +
.../go_benchmark_functions/go_funcs_L.py | 319 +
.../go_benchmark_functions/go_funcs_M.py | 724 +
.../go_benchmark_functions/go_funcs_N.py | 151 +
.../go_benchmark_functions/go_funcs_O.py | 64 +
.../go_benchmark_functions/go_funcs_P.py | 728 +
.../go_benchmark_functions/go_funcs_Q.py | 130 +
.../go_benchmark_functions/go_funcs_R.py | 410 +
.../go_benchmark_functions/go_funcs_S.py | 1369 +
.../go_benchmark_functions/go_funcs_T.py | 393 +
.../go_benchmark_functions/go_funcs_U.py | 168 +
.../go_benchmark_functions/go_funcs_V.py | 87 +
.../go_benchmark_functions/go_funcs_W.py | 325 +
.../go_benchmark_functions/go_funcs_X.py | 243 +
.../go_benchmark_functions/go_funcs_Y.py | 86 +
.../go_benchmark_functions/go_funcs_Z.py | 228 +
.../go_benchmark_functions/go_funcs_univariate.py | 730 +
benchmarks/benchmarks/integrate.py | 63 +
benchmarks/benchmarks/interpolate.py | 225 +
benchmarks/benchmarks/io_matlab.py | 120 +
benchmarks/benchmarks/linalg.py | 155 +
benchmarks/benchmarks/linalg_solve_toeplitz.py | 46 +
benchmarks/benchmarks/linalg_sqrtm.py | 37 +
benchmarks/benchmarks/lsq_problems.py | 490 +
benchmarks/benchmarks/optimize.py | 468 +
benchmarks/benchmarks/optimize_zeros.py | 29 +
benchmarks/benchmarks/signal.py | 143 +
benchmarks/benchmarks/signal_filtering.py | 47 +
benchmarks/benchmarks/sparse.py | 339 +
benchmarks/benchmarks/sparse_csgraph.py | 33 +
benchmarks/benchmarks/sparse_linalg_expm.py | 86 +
benchmarks/benchmarks/sparse_linalg_lobpcg.py | 108 +
benchmarks/benchmarks/sparse_linalg_onenormest.py | 55 +
benchmarks/benchmarks/sparse_linalg_solve.py | 83 +
benchmarks/benchmarks/spatial.py | 129 +
benchmarks/benchmarks/special.py | 66 +
benchmarks/benchmarks/stats.py | 96 +
benchmarks/benchmarks/test_functions.py | 307 +
.../benchmarks/test_go_benchmark_functions.py | 45 +
benchmarks/run.py | 132 +
circle.yml | 16 +
codecov.yml | 9 +
cythonize.dat | 30 -
doc/release/0.18.1-notes.rst | 48 +
doc/scipy-sphinx-theme/.gitignore | 14 -
doc/scipy-sphinx-theme/Makefile | 55 -
doc/scipy-sphinx-theme/README.rst | 49 -
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.../_theme/scipy/static/less/spc-content.less | 57 -
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.../_theme/scipy/static/less/spc-header.less | 25 -
.../_theme/scipy/static/less/spc-rightsidebar.less | 14 -
.../_theme/scipy/static/less/spc-utils.less | 20 -
.../_theme/scipy/static/scipy.css_t | 247 -
doc/scipy-sphinx-theme/_theme/scipy/theme.conf | 11 -
doc/scipy-sphinx-theme/conf.py | 71 -
doc/scipy-sphinx-theme/index.rst | 30 -
doc/scipy-sphinx-theme/test_autodoc.rst | 6 -
doc/scipy-sphinx-theme/test_autodoc_2.rst | 6 -
doc/scipy-sphinx-theme/test_autodoc_3.rst | 7 -
doc/scipy-sphinx-theme/test_autodoc_4.rst | 6 -
doc/scipy-sphinx-theme/test_optimize.rst | 783 -
doc/source/release.0.17.1.rst | 1 +
doc/source/release.0.18.1.rst | 1 +
doc/source/release.rst | 3 +
doc/sphinxext/.gitignore | 8 -
doc/sphinxext/.travis.yml | 15 -
doc/sphinxext/LICENSE.txt | 94 -
doc/sphinxext/MANIFEST.in | 2 -
doc/sphinxext/README.rst | 65 -
doc/sphinxext/numpydoc/__init__.py | 3 -
doc/sphinxext/numpydoc/comment_eater.py | 169 -
doc/sphinxext/numpydoc/compiler_unparse.py | 865 -
doc/sphinxext/numpydoc/docscrape.py | 570 -
doc/sphinxext/numpydoc/docscrape_sphinx.py | 284 -
doc/sphinxext/numpydoc/linkcode.py | 83 -
doc/sphinxext/numpydoc/numpydoc.py | 203 -
doc/sphinxext/numpydoc/phantom_import.py | 167 -
doc/sphinxext/numpydoc/plot_directive.py | 642 -
doc/sphinxext/numpydoc/tests/test_docscrape.py | 907 -
doc/sphinxext/numpydoc/tests/test_linkcode.py | 5 -
.../numpydoc/tests/test_phantom_import.py | 12 -
.../numpydoc/tests/test_plot_directive.py | 11 -
doc/sphinxext/numpydoc/tests/test_traitsdoc.py | 11 -
doc/sphinxext/numpydoc/traitsdoc.py | 143 -
doc/sphinxext/setup.py | 30 -
pavement.py | 743 +
runtests.py | 470 +
scipy/cluster/_hierarchy.c | 32217 -------
scipy/cluster/_vq.c | 10192 ---
scipy/integrate/quadpack.py | 4 +-
scipy/integrate/tests/test_quadpack.py | 17 +-
scipy/interpolate/_cubic.py | 2 +-
scipy/interpolate/_ppoly.c | 34562 --------
scipy/interpolate/interpnd.c | 30754 -------
scipy/interpolate/tests/test_polyint.py | 5 +
scipy/io/matlab/mio5_utils.c | 17636 ----
scipy/io/matlab/mio_utils.c | 6232 --
scipy/io/matlab/streams.c | 8449 --
scipy/linalg/_decomp_update.c | 39954 ---------
scipy/linalg/_decomp_update.pyx | 2503 -
scipy/linalg/_solve_toeplitz.c | 24941 ------
scipy/linalg/basic.py | 2 +-
scipy/linalg/cython_blas.c | 29236 -------
scipy/linalg/cython_lapack.c | 46389 -----------
scipy/linalg/tests/test_basic.py | 6 +-
scipy/ndimage/src/_ni_label.c | 33347 --------
scipy/optimize/_group_columns.c | 21899 -----
scipy/optimize/_lsq/givens_elimination.c | 18429 ----
scipy/signal/_max_len_seq_inner.c | 20918 -----
scipy/signal/_spectral.c | 6655 --
scipy/signal/_upfirdn_apply.c | 24888 ------
scipy/sparse/_csparsetools.c | 37358 ---------
scipy/sparse/_csparsetools.pyx | 935 -
scipy/sparse/compressed.py | 7 +-
scipy/sparse/csgraph/_min_spanning_tree.c | 21904 -----
scipy/sparse/csgraph/_reordering.c | 30012 -------
scipy/sparse/csgraph/_shortest_path.c | 19944 -----
scipy/sparse/csgraph/_tools.c | 11486 ---
scipy/sparse/csgraph/_traversal.c | 13376 ---
scipy/sparse/tests/test_base.py | 18 +-
scipy/spatial/_procrustes.py | 4 +-
scipy/spatial/ckdtree.cxx | 22322 -----
scipy/spatial/ckdtree.h | 62 -
scipy/spatial/ckdtree/src/query.cxx | 5 +-
scipy/spatial/qhull.c | 45605 ----------
scipy/spatial/tests/test_kdtree.py | 26 +-
scipy/special/_comb.c | 2950 -
scipy/special/_ellip_harm_2.c | 9794 ---
scipy/special/_ellip_harm_2.h | 31 -
scipy/special/_loggamma.pxd | 3 +-
scipy/special/_ufuncs.c | 83000 -------------------
scipy/special/_ufuncs.h | 31 -
scipy/special/_ufuncs.pyx | 49 +-
scipy/special/_ufuncs_cxx.cxx | 5281 --
scipy/special/_ufuncs_cxx.h | 31 -
scipy/special/add_newdocs.py | 49 +-
.../tests/data/boost/acosh_data_ipp/acosh_data.txt | 261 +
.../tests/data/boost/asinh_data_ipp/asinh_data.txt | 281 +
.../assoc_legendre_p_ipp/assoc_legendre_p.txt | 400 +
.../tests/data/boost/atanh_data_ipp/atanh_data.txt | 260 +
.../data/boost/bessel_i_data_ipp/bessel_i_data.txt | 225 +
.../bessel_i_int_data_ipp/bessel_i_int_data.txt | 495 +
.../data/boost/bessel_j_data_ipp/bessel_j_data.txt | 360 +
.../bessel_j_int_data_ipp/bessel_j_int_data.txt | 224 +
.../bessel_j_large_data.txt | 70 +
.../data/boost/bessel_k_data_ipp/bessel_k_data.txt | 263 +
.../bessel_k_int_data_ipp/bessel_k_int_data.txt | 481 +
.../boost/bessel_y01_data_ipp/bessel_y01_data.txt | 100 +
.../boost/bessel_yn_data_ipp/bessel_yn_data.txt | 300 +
.../boost/bessel_yv_data_ipp/bessel_yv_data.txt | 432 +
.../data/boost/beta_exp_data_ipp/beta_exp_data.txt | 351 +
.../data/boost/beta_med_data_ipp/beta_med_data.txt | 1830 +
.../boost/beta_small_data_ipp/beta_small_data.txt | 21 +
.../data/boost/binomial_data_ipp/binomial_data.txt | 159 +
.../binomial_large_data.txt | 230 +
.../binomial_quantile_data.txt | 4032 +
.../tests/data/boost/cbrt_data_ipp/cbrt_data.txt | 85 +
.../data/boost/digamma_data_ipp/digamma_data.txt | 500 +
.../digamma_neg_data_ipp/digamma_neg_data.txt | 200 +
.../digamma_root_data_ipp/digamma_root_data.txt | 200 +
.../digamma_small_data_ipp/digamma_small_data.txt | 33 +
.../boost/ellint_e2_data_ipp/ellint_e2_data.txt | 520 +
.../data/boost/ellint_e_data_ipp/ellint_e_data.txt | 100 +
.../data/boost/ellint_f_data_ipp/ellint_f_data.txt | 610 +
.../data/boost/ellint_k_data_ipp/ellint_k_data.txt | 100 +
.../boost/ellint_pi2_data_ipp/ellint_pi2_data.txt | 500 +
.../boost/ellint_pi3_data_ipp/ellint_pi3_data.txt | 400 +
.../ellint_pi3_large_data.txt | 380 +
.../boost/ellint_rc_data_ipp/ellint_rc_data.txt | 201 +
.../boost/ellint_rd_data_ipp/ellint_rd_data.txt | 201 +
.../boost/ellint_rf_data_ipp/ellint_rf_data.txt | 401 +
.../boost/ellint_rj_data_ipp/ellint_rj_data.txt | 801 +
.../tests/data/boost/erf_data_ipp/erf_data.txt | 500 +
.../data/boost/erf_inv_data_ipp/erf_inv_data.txt | 100 +
.../boost/erf_large_data_ipp/erf_large_data.txt | 300 +
.../boost/erf_small_data_ipp/erf_small_data.txt | 150 +
.../erfc_inv_big_data_ipp/erfc_inv_big_data1.txt | 151 +
.../erfc_inv_big_data_ipp/erfc_inv_big_data2.txt | 49 +
.../data/boost/erfc_inv_data_ipp/erfc_inv_data.txt | 100 +
.../data/boost/expint_1_data_ipp/expint_1_data.txt | 79 +
.../data/boost/expint_data_ipp/expint_data.txt | 600 +
.../expint_small_data_ipp/expint_small_data.txt | 380 +
.../expinti_data_double.txt | 100 +
.../data/boost/expinti_data_ipp/expinti_data.txt | 336 +
.../gamma_inv_big_data_ipp/gamma_inv_big_data.txt | 130 +
.../boost/gamma_inv_data_ipp/gamma_inv_data.txt | 200 +
.../gamma_inv_small_data.txt | 229 +
.../tests/data/boost/hermite_ipp/hermite.txt | 420 +
.../tests/data/boost/ibeta_data_ipp/ibeta_data.txt | 500 +
.../boost/ibeta_int_data_ipp/ibeta_int_data.txt | 1000 +
.../boost/ibeta_inv_data_ipp/ibeta_inv_data.txt | 1210 +
.../boost/ibeta_inva_data_ipp/ibeta_inva_data.txt | 1100 +
.../ibeta_large_data_ipp/ibeta_large_data.txt | 1210 +
.../ibeta_small_data_ipp/ibeta_small_data.txt | 500 +
.../boost/igamma_big_data_ipp/igamma_big_data.txt | 287 +
.../boost/igamma_int_data_ipp/igamma_int_data.txt | 140 +
.../igamma_inva_data_ipp/igamma_inva_data.txt | 435 +
.../boost/igamma_med_data_ipp/igamma_med_data.txt | 700 +
.../igamma_small_data_ipp/igamma_small_data.txt | 252 +
.../tests/data/boost/laguerre2_ipp/laguerre2.txt | 280 +
.../tests/data/boost/laguerre3_ipp/laguerre3.txt | 2240 +
.../tests/data/boost/legendre_p_ipp/legendre_p.txt | 140 +
.../legendre_p_large_ipp/legendre_p_large.txt | 160 +
.../log1p_expm1_data_ipp/log1p_expm1_data.txt | 80 +
.../tests/data/boost/ncbeta_big_ipp/ncbeta_big.txt | 72 +
.../special/tests/data/boost/ncbeta_ipp/ncbeta.txt | 3000 +
.../tests/data/boost/nccs_big_ipp/nccs_big.txt | 216 +
scipy/special/tests/data/boost/nccs_ipp/nccs.txt | 3200 +
.../negative_binomial_quantile_data.txt | 792 +
.../poisson_quantile_ipp/poisson_quantile_data.txt | 619 +
.../boost/powm1_sqrtp1m1_test_cpp/powm1_data.txt | 1400 +
.../powm1_sqrtp1m1_test_cpp/sqrtp1m1_data.txt | 141 +
.../boost/sph_bessel_data_ipp/sph_bessel_data.txt | 483 +
.../sph_neumann_data_ipp/sph_neumann_data.txt | 284 +
.../spherical_harmonic_ipp/spherical_harmonic.txt | 1000 +
.../data/boost/test_gamma_data_ipp/factorials.txt | 198 +
.../boost/test_gamma_data_ipp/gammap1m1_data.txt | 141 +
.../data/boost/test_gamma_data_ipp/near_0.txt | 40 +
.../data/boost/test_gamma_data_ipp/near_1.txt | 41 +
.../data/boost/test_gamma_data_ipp/near_2.txt | 41 +
.../data/boost/test_gamma_data_ipp/near_m10.txt | 40 +
.../data/boost/test_gamma_data_ipp/near_m55.txt | 40 +
.../tgamma_delta_ratio_data.txt | 560 +
.../tgamma_delta_ratio_int2.txt | 190 +
.../tgamma_delta_ratio_int.txt | 344 +
.../tgamma_ratio_data_ipp/tgamma_ratio_data.txt | 400 +
.../zeta_1_below_data_ipp/zeta_1_below_data.txt | 24 +
.../boost/zeta_1_up_data_ipp/zeta_1_up_data.txt | 24 +
.../tests/data/boost/zeta_data_ipp/zeta_data.txt | 200 +
.../data/boost/zeta_neg_data_ipp/zeta_neg_data.txt | 200 +
scipy/special/tests/data/gsl/mathieu_ab.txt | 324 +
scipy/special/tests/data/gsl/mathieu_ce_se.txt | 3573 +
scipy/special/tests/data/gsl/mathieu_mc_ms.txt | 901 +
scipy/special/tests/test_loggamma.py | 16 +
scipy/stats/_stats.c | 29131 -------
scipy/stats/_stats.pyx | 36 -
scipy/stats/morestats.py | 11 +-
scipy/stats/stats.py | 29 +-
scipy/stats/tests/test_morestats.py | 13 +
scipy/version.py | 10 -
setup.py | 2 +-
site.cfg.example | 157 +
tools/authors.py | 1 +
.../nsis_scripts/scipy-superinstaller.nsi.in | 366 +-
599 files changed, 64618 insertions(+), 769862 deletions(-)
diff --git a/.coveragerc b/.coveragerc
new file mode 100644
index 0000000..ab9da32
--- /dev/null
+++ b/.coveragerc
@@ -0,0 +1,3 @@
+[run]
+branch = True
+include = */scipy/*
diff --git a/.gitattributes b/.gitattributes
new file mode 100644
index 0000000..41c1f83
--- /dev/null
+++ b/.gitattributes
@@ -0,0 +1,55 @@
+* text=auto
+tools/win32/build_scripts/nsis_scripts/*.nsi.in eol=crlf
+
+# Don't want to convert line endings of this file, causes test failure on
+# Windows
+scipy/io/matlab/tests/data/japanese_utf8.txt binary
+
+# Autogenerated files
+scipy/special/_ufuncs_cxx.pyx binary
+scipy/special/_ufuncs_cxx.pxd binary
+scipy/special/_ufuncs.pyx binary
+scipy/special/_ufuncs_defs.h binary
+scipy/linalg/_blas_subroutine_wrappers.f binary
+scipy/linalg/_blas_subroutines.h binary
+scipy/linalg/_lapack_subroutine_wrappers.f binary
+scipy/linalg/_lapack_subroutines.h binary
+scipy/linalg/cython_blas.pxd binary
+scipy/linalg/cython_blas.pyx binary
+scipy/linalg/cython_blas_signatures.txt binary
+scipy/linalg/cython_lapack.pxd binary
+scipy/linalg/cython_lapack.pyx binary
+scipy/linalg/cython_lapack_signatures.txt binary
+
+# SWIG-generated files
+scipy/sparse/sparsetools/bsr.py binary
+scipy/sparse/sparsetools/bsr_wrap.cxx binary
+scipy/sparse/sparsetools/coo.py binary
+scipy/sparse/sparsetools/coo_wrap.cxx binary
+scipy/sparse/sparsetools/csc.py binary
+scipy/sparse/sparsetools/csc_wrap.cxx binary
+scipy/sparse/sparsetools/csr.py binary
+scipy/sparse/sparsetools/csr_wrap.cxx binary
+scipy/sparse/sparsetools/dia.py binary
+scipy/sparse/sparsetools/dia_wrap.cxx binary
+scipy/sparse/sparsetools/csgraph.py binary
+scipy/sparse/sparsetools/csgraph_wrap.cxx binary
+
+# Numerical data files
+scipy/special/tests/data/*.txt binary
+scipy/special/tests/data/*/*.txt binary
+scipy/special/tests/data/*/*/*.txt binary
+
+# SWIG-generated files
+scipy/sparse/sparsetools/bsr.py binary
+scipy/sparse/sparsetools/bsr_wrap.cxx binary
+scipy/sparse/sparsetools/coo.py binary
+scipy/sparse/sparsetools/coo_wrap.cxx binary
+scipy/sparse/sparsetools/csc.py binary
+scipy/sparse/sparsetools/csc_wrap.cxx binary
+scipy/sparse/sparsetools/csr.py binary
+scipy/sparse/sparsetools/csr_wrap.cxx binary
+scipy/sparse/sparsetools/dia.py binary
+scipy/sparse/sparsetools/dia_wrap.cxx binary
+scipy/sparse/sparsetools/csgraph.py binary
+scipy/sparse/sparsetools/csgraph_wrap.cxx binary
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..2558207
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,220 @@
+# Editor temporary/working/backup files #
+#########################################
+.#*
+[#]*#
+*~
+*$
+*.bak
+.idea/*
+*.kdev4
+*.org
+.project
+.pydevproject
+*.rej
+.settings/
+.*.sw[nop]
+.sw[nop]
+*.tmp
+*.vim
+tags
+
+# Compiled source #
+###################
+*.a
+*.com
+*.class
+*.dll
+*.exe
+*.l[ao]
+*.o
+*.py[ocd]
+*.so
+_configtest.c
+
+# Packages #
+############
+# it's better to unpack these files and commit the raw source
+# git has its own built in compression methods
+*.7z
+*.bz2
+*.bzip2
+*.dmg
+*.gz
+*.iso
+*.jar
+*.rar
+*.tar
+*.tbz2
+*.tgz
+*.zip
+
+# Python files #
+################
+# setup.py working directory
+build
+# sphinx build directory
+doc/_build
+# cython files
+cythonize.dat
+# setup.py dist directory
+dist
+# Egg metadata
+*.egg-info
+# tox testing tool
+.tox
+# The shelf plugin uses this dir
+./.shelf
+MANIFEST
+# distutils configuration
+site.cfg
+setup.cfg
+# other temporary files
+.coverage
+.deps
+.libs
+
+# Paver generated files #
+#########################
+/release
+
+# Logs and databases #
+######################
+*.log
+*.sql
+*.sqlite
+
+# Patches #
+###########
+*.patch
+*.diff
+
+# OS generated files #
+######################
+.directory
+.fseventsd
+.DS_Store*
+.gdb_history
+.VolumeIcon.icns
+ehthumbs.db
+Icon?
+Thumbs.db
+*.dSYM
+
+# Documentation generated files #
+#################################
+doc/frontpage/build
+doc/source/generated
+
+# Things specific to this project #
+###################################
+benchmarks/env
+benchmarks/results
+benchmarks/scipy
+benchmarks/html
+benchmarks/scipy-benchmarks
+scipy/__config__.py
+scipy/cluster/_vq.c
+scipy/cluster/_hierarchy.c
+scipy/fftpack/_fftpackmodule.c
+scipy/fftpack/convolvemodule.c
+scipy/fftpack/src/dct.c
+scipy/fftpack/src/dst.c
+scipy/integrate/_dopmodule.c
+scipy/integrate/lsodamodule.c
+scipy/integrate/vodemodule.c
+scipy/interpolate/_ppoly.c
+scipy/interpolate/interpnd.c
+scipy/interpolate/src/dfitpack-f2pywrappers.f
+scipy/interpolate/src/dfitpackmodule.c
+scipy/io/matlab/mio5_utils.c
+scipy/io/matlab/mio_utils.c
+scipy/io/matlab/streams.c
+scipy/lib/blas/cblas.pyf
+scipy/lib/blas/cblasmodule.c
+scipy/lib/blas/fblas-f2pywrappers.f
+scipy/lib/blas/fblas.pyf
+scipy/lib/blas/fblasmodule.c
+scipy/lib/blas/fblaswrap.f
+scipy/lib/lapack/clapack.pyf
+scipy/lib/lapack/clapackmodule.c
+scipy/lib/lapack/flapack.pyf
+scipy/lib/lapack/flapackmodule.c
+scipy/linalg/_cblasmodule.c
+scipy/linalg/_clapackmodule.c
+scipy/linalg/_fblas-f2pywrappers.f
+scipy/linalg/_fblasmodule.c
+scipy/linalg/_flapack-f2pywrappers.f
+scipy/linalg/_flapackmodule.c
+scipy/linalg/_interpolativemodule.c
+scipy/linalg/_solve_toeplitz.c
+scipy/linalg/_decomp_update.c
+scipy/linalg/_decomp_update.pyx
+scipy/linalg/cblas.pyf
+scipy/linalg/clapack.pyf
+scipy/linalg/cython_blas.c
+scipy/linalg/cython_lapack.c
+scipy/linalg/fblas.pyf
+scipy/linalg/flapack.pyf
+scipy/linalg/src/id_dist/src/*_subr_*.f
+scipy/ndimage/src/_ni_label.c
+scipy/optimize/cobyla/_cobylamodule.c
+scipy/optimize/lbfgsb/_lbfgsbmodule.c
+scipy/optimize/minpack2/minpack2module.c
+scipy/optimize/nnls/_nnlsmodule.c
+scipy/optimize/slsqp/_slsqpmodule.c
+scipy/optimize/_lsq/givens_elimination.c
+scipy/signal/_spectral.c
+scipy/signal/_max_len_seq_inner.c
+scipy/signal/_upfirdn_apply.c
+scipy/signal/correlate_nd.c
+scipy/signal/lfilter.c
+scipy/sparse/_csparsetools.c
+scipy/sparse/_csparsetools.pyx
+scipy/sparse/csgraph/_min_spanning_tree.c
+scipy/sparse/csgraph/_shortest_path.c
+scipy/sparse/csgraph/_tools.c
+scipy/sparse/csgraph/_traversal.c
+scipy/sparse/csgraph/_reordering.c
+scipy/sparse/linalg/dsolve/umfpack/_umfpack.py
+scipy/sparse/linalg/dsolve/umfpack/_umfpack_wrap.c
+scipy/sparse/linalg/eigen/arpack/_arpack-f2pywrappers.f
+scipy/sparse/linalg/eigen/arpack/_arpackmodule.c
+scipy/sparse/linalg/eigen/arpack/arpack.pyf
+scipy/sparse/linalg/isolve/iterative/BiCGREVCOM.f
+scipy/sparse/linalg/isolve/iterative/BiCGSTABREVCOM.f
+scipy/sparse/linalg/isolve/iterative/CGREVCOM.f
+scipy/sparse/linalg/isolve/iterative/CGSREVCOM.f
+scipy/sparse/linalg/isolve/iterative/GMRESREVCOM.f
+scipy/sparse/linalg/isolve/iterative/QMRREVCOM.f
+scipy/sparse/linalg/isolve/iterative/STOPTEST2.f
+scipy/sparse/linalg/isolve/iterative/_iterative.pyf
+scipy/sparse/linalg/isolve/iterative/_iterativemodule.c
+scipy/sparse/linalg/isolve/iterative/getbreak.f
+scipy/sparse/sparsetools/bsr_impl.h
+scipy/sparse/sparsetools/csc_impl.h
+scipy/sparse/sparsetools/csr_impl.h
+scipy/sparse/sparsetools/other_impl.h
+scipy/sparse/sparsetools/sparsetools_impl.h
+scipy/spatial/ckdtree.cxx
+scipy/spatial/ckdtree.h
+scipy/spatial/qhull.c
+scipy/special/_comb.c
+scipy/spatial/qhull_misc_config.h
+scipy/special/_ellip_harm_2.c
+scipy/special/_ellip_harm_2.h
+scipy/special/_logit.c
+scipy/special/_ufuncs.c
+scipy/special/_ufuncs.h
+scipy/special/_ufuncs_cxx.cxx
+scipy/special/_ufuncs_cxx.h
+scipy/special/specfunmodule.c
+scipy/stats/_rank.c
+scipy/stats/mvn-f2pywrappers.f
+scipy/stats/mvnmodule.c
+scipy/stats/statlibmodule.c
+scipy/stats/vonmises_cython.c
+scipy/stats/_stats.c
+scipy/version.py
+scipy/special/_exprel.c
+scipy/optimize/_group_columns.c
+
diff --git a/.gitmodules b/.gitmodules
new file mode 100644
index 0000000..1b0706f
--- /dev/null
+++ b/.gitmodules
@@ -0,0 +1,6 @@
+[submodule "doc/scipy-sphinx-theme"]
+ path = doc/scipy-sphinx-theme
+ url = https://github.com/scipy/scipy-sphinx-theme.git
+[submodule "doc/sphinxext"]
+ path = doc/sphinxext
+ url = https://github.com/numpy/numpydoc.git
diff --git a/.travis.yml b/.travis.yml
new file mode 100644
index 0000000..d4bd134
--- /dev/null
+++ b/.travis.yml
@@ -0,0 +1,179 @@
+# After changing this file, check it on:
+# http://lint.travis-ci.org/
+language: python
+sudo: false
+matrix:
+ include:
+ - python: 2.7
+ env:
+ - PYFLAKES=1
+ - PEP8=1
+ - NUMPYSPEC=numpy
+ before_install:
+ - pip install pep8==1.7.0
+ - pip install pyflakes==1.1.0
+ script:
+ - PYFLAKES_NODOCTEST=1 pyflakes scipy benchmarks/benchmarks | grep -E -v 'unable to detect undefined names|assigned to but never used|imported but unused|redefinition of unused|may be undefined, or defined from star imports' > test.out; cat test.out; test \! -s test.out
+ - pep8 scipy benchmarks/benchmarks
+ - python: 2.7
+ env:
+ - TESTMODE=fast
+ - REFGUIDE_CHECK=1
+ - COVERAGE=
+ - NPY_RELAXED_STRIDES_CHECKING=1
+ - NUMPYSPEC="--upgrade git+git://github.com/numpy/numpy.git@v1.10.2"
+ addons:
+ apt:
+ packages:
+ - libatlas-dev
+ - libatlas-base-dev
+ - liblapack-dev
+ - gfortran
+ - libgmp-dev
+ - libmpfr-dev
+ - ccache
+ - libfreetype6-dev
+ - libpng-dev
+ - zlib1g-dev
+ - texlive-fonts-recommended
+ - python: 3.5
+ env:
+ - TESTMODE=fast
+ - COVERAGE=
+ # We do not have a TLS cert for the Rackspace CDN that hosts travis-dev-wheels.scipy.org
+ - NUMPYSPEC="--pre --upgrade --no-index --timeout=60 --trusted-host travis-dev-wheels.scipy.org -f http://travis-dev-wheels.scipy.org/ numpy"
+ - USE_WHEEL=1
+ - UPLOAD_DEV_WHEEL=1
+ - WHEELHOUSE_UPLOADER_USERNAME=travis.numpy
+ # The following is generated with the command:
+ # travis encrypt -r scipy/scipy WHEELHOUSE_UPLOADER_SECRET=tH3AP1KeY
+ - secure: "cZtB3kMSAY4iYN60SF/Euw2YJvd7FjrjDAkPjQnr8DUxobgjYsdVxtLu2l\
+ KPt5ZfX5poTFI4kDnPoI6zjvbDvMvVhxp8L9psi19h6mVS+BjAfQ06HYfz\
+ jdPPiyTOhxfxRQ60SC+617kZSLrP6AeIiPdb+IFcM/987oYBDYOoVb0="
+ - python: 3.4
+ env:
+ - TESTMODE=fast
+ - COVERAGE=
+ - NUMPYSPEC="numpy==1.7.2"
+ - USE_SDIST=1
+ - python: 2.7
+ env:
+ - TESTMODE=full
+ - COVERAGE=--coverage
+ - NUMPYSPEC=numpy
+addons:
+ apt:
+ packages:
+ - libatlas-dev
+ - libatlas-base-dev
+ - liblapack-dev
+ - gfortran
+ - libgmp-dev
+ - libmpfr-dev
+ - ccache
+cache:
+ directories:
+ - $HOME/.ccache
+before_install:
+ - export PATH=/usr/lib/ccache:$PATH
+ - uname -a
... 837329 lines suppressed ...
--
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