[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_beta #36731

jenkins at jenkins.debian.net jenkins at jenkins.debian.net
Fri Mar 27 20:01:23 UTC 2015 

See <https://jenkins.debian.net/job/reproducible_builder_beta/36731/>

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[...truncated 7343 lines...]
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/stream/stream.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/stream/unique.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/stream/sorted_runs.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/stream/choose.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/stream/sort_stream.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/defines.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/mmap_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_with_waiters.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/boostfd_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_queue_impl_worker.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/mem_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/completion_handler.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/disk_queued_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/serving_request.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_queue_impl_1q.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/syscall_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/create_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_interface.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/wbtl_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/simdisk_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_operations.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/fileperblock_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/ufs_file_base.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/disk_queues.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/wincall_file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_queue_impl_qwqr.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/file.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_with_state.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/wfs_file_base.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/request_queue.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/iostats.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/io/io.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/libstxxl.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/namespace.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/verbose.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/stable_ksort.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/intksort.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/scan.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/ksort.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/random_shuffle.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/inmemsort.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/sort.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/adaptor.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/async_schedule.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/sort_base.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/sort_helper.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/losertree.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/algo/run_cursor.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/priority_queue.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/pq_losertree.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/stack.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/matrix.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/pager.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/sorter.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/matrix_arithmetic.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/matrix_low_level.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/deque.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/vector.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/queue.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/pq_mergers.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/map.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/sequence.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/pq_ext_merger.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/node_cache.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/leaf.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/btree.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/iterator_map.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/iterator.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/node.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/btree/root_node.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/containers/pq_helpers.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/condition_variable.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/types.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/timer.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/is_sorted.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/counting_ptr.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/seed.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/aligned_alloc.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/state.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/mutex.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/log.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/exceptions.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/uint_types.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/tuple.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/onoff_switch.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/error_handling.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/exithandler.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/semaphore.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/addressable_queues.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/cmdline.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/tmeta.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/new_alloc.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/utils.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/rand.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/settings.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/common/simple_vector.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/mng
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/stats
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/vector
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/random_shuffle
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/sort
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/map
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/aligned_alloc
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/stable_ksort
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/stream
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/io
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/stack
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/random
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/priority_queue
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/timer
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/include/stxxl/bits/config.h
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/pkgconfig/stxxl.pc
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/cmake/stxxl/stxxl-version.cmake
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/cmake/stxxl/stxxl-config.cmake
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/cmake/stxxl/stxxl-targets.cmake
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/cmake/stxxl/stxxl-targets-debug.cmake
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/libstxxl.so.1.4.0
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/libstxxl.so.1
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/lib/libstxxl.so
-- Installing: /tmp/buildd/libstxxl-1.4.0/debian/tmp/usr/bin/stxxl_tool
make[2]: Leaving directory '/tmp/buildd/libstxxl-1.4.0/obj-x86_64-linux-gnu'
#Don't want this, so delete it
rm -rf $(pwd)/debian/tmp/usr/lib/cmake/
make[1]: Leaving directory '/tmp/buildd/libstxxl-1.4.0'
   debian/rules override_dh_install
make[1]: Entering directory '/tmp/buildd/libstxxl-1.4.0'
dh_install
#Relink jquery to system provided copy.
rm -f $(pwd)/debian/libstxxl-doc//usr/share/doc/libstxxl-doc/html/html/jquery.js
mkdir -p $(pwd)/debian/libstxxl-doc/$(dirname /usr/share/doc/libstxxl-doc/html/html/jquery.js )
#Symlink to system value
ln -s /usr/share/javascript/jquery/jquery.js $(pwd)/debian/libstxxl-doc//usr/share/doc/libstxxl-doc/html/html/jquery.js  
make[1]: Leaving directory '/tmp/buildd/libstxxl-1.4.0'
   dh_installdocs -O--parallel
   dh_installchangelogs -O--parallel
   dh_installman -O--parallel
   dh_lintian -O--parallel
   dh_perl -O--parallel
   dh_link -O--parallel
   dh_strip_nondeterminism -O--parallel
   dh_compress -O--parallel
   dh_fixperms -O--parallel
   debian/rules override_dh_strip
make[1]: Entering directory '/tmp/buildd/libstxxl-1.4.0'
dh_strip --dbg-package=libstxxl1-dbg
make[1]: Leaving directory '/tmp/buildd/libstxxl-1.4.0'
   dh_makeshlibs -O--parallel
   dh_shlibdeps -O--parallel
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libstxxl1/usr/lib/libstxxl.so.1.4.0 was not linked against libgomp.so.1 (it uses none of the library's symbols)
   dh_installdeb -O--parallel
   dh_gencontrol -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
   dh_md5sums -O--parallel
   dh_builddeb -O--parallel
dpkg-deb: building package `libstxxl-dev' in `../libstxxl-dev_1.4.0-3_amd64.deb'.
dpkg-deb: building package `libstxxl-doc' in `../libstxxl-doc_1.4.0-3_all.deb'.
dpkg-deb: building package `libstxxl1' in `../libstxxl1_1.4.0-3_amd64.deb'.
dpkg-deb: building package `libstxxl1-bin' in `../libstxxl1-bin_1.4.0-3_amd64.deb'.
dpkg-deb: building package `libstxxl1-dbg' in `../libstxxl1-dbg_1.4.0-3_amd64.deb'.
 dpkg-genbuildinfo  >../libstxxl_1.4.0-3_amd64.buildinfo
 dpkg-distaddfile libstxxl_1.4.0-3_amd64.buildinfo science optional
dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe
 dpkg-genchanges -b >../libstxxl_1.4.0-3_amd64.changes
dpkg-genchanges: binary-only upload (no source code included)
Use of uninitialized value $b in string eq at /usr/share/perl5/Dpkg/Arch.pm line 370.
Use of uninitialized value $arch in pattern match (m//) at /usr/share/perl5/Dpkg/Arch.pm line 306.
Use of uninitialized value $arch in hash element at /usr/share/perl5/Dpkg/Arch.pm line 311.
 dpkg-source --after-build libstxxl-1.4.0
dpkg-buildpackage: binary-only upload (no source included)
W: no hooks of type B found -- ignoring
I: unmounting /sys filesystem
I: unmounting /run/shm filesystem
I: unmounting /dev/shm filesystem
I: unmounting dev/pts filesystem
I: unmounting proc filesystem
I: cleaning the build env 
I: removing directory /var/cache/pbuilder/build//48901 and its subdirectories
I: Current time: Sat Mar 28 10:01:04 GMT-14 2015
I: pbuilder-time-stamp: 1427486464
+ set +x
Format: 1.8
Date: Sun, 21 Sep 2014 10:39:51 +0200
Source: libstxxl
Binary: libstxxl-dev libstxxl-doc libstxxl1 libstxxl1-bin libstxxl1-dbg
Architecture: amd64 all
Version: 1.4.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers <debian-science-maintainers at lists.alioth.debian.org>
Changed-By: Anton Gladky <gladk at debian.org>
Description:
 libstxxl-dev - Development libraries for STXXL
 libstxxl-doc - Documentation for STXXL
 libstxxl1  - C++ Standard Template Library for extra large datasets
 libstxxl1-bin - STXXL File creation and benchmark tool
 libstxxl1-dbg - Debugging symbols for STXXL libraries
Closes: 75901
Changes:
 libstxxl (1.4.0-3) unstable; urgency=medium
 .
   [ Anton Gladky ]
   * [799da84] Add myself to uploaders.
   * [e56aaad] Add autopkgtests.
   * [76dc00f] Simplify debian/rules.
   * [af58c7f] Use wrap-and-sort.
 .
   [ D Haley ]
   * [3d9d2d1] Fix FTBFS for 32 bit via upstream patches (Closes: #75901)
   * [44d06b0] Relink against system jquery
   * [2618c7f] Remove testing ccache CC/CXX
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 c56aae7815f579bc58b7c9d8d3f5a588 127128 science optional libstxxl1_1.4.0-3_amd64.deb
 80f23278760dd1afdb52e5ea86c53469 409598 misc extra libstxxl1-bin_1.4.0-3_amd64.deb
 7f6ca827ec4ff9c76f7b157b6cd9b2a0 6317312 debug extra libstxxl1-dbg_1.4.0-3_amd64.deb
 ba83ab40e3bbb03214ececfb48b0bd3f 10524 science optional libstxxl_1.4.0-3_amd64.buildinfo

Fri Mar 27 20:01:04 UTC 2015 - debbindiff 11 will be used to compare the two builds now.


Fri Mar 27 20:01:23 UTC 2015 - libstxxl failed to build reproducibly in testing on amd64 , debbindiff found issues, please investigate https://reproducible.debian.net/dbd/testing/amd64/libstxxl_1.4.0-3.debbindiff.html.
Error: columns name, version, suite, architecture, build_date are not unique
Fri Mar 27 20:01:23 UTC 2015 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-s54zeLCJ, which will now be removed.
Build step 'Execute shell' marked build as failure

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