[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_amd64_8 #2242

jenkins at jenkins.debian.net jenkins at jenkins.debian.net
Sun Sep 20 16:21:10 UTC 2015 

See <https://jenkins.debian.net/job/reproducible_builder_amd64_8/2242/>

------------------------------------------
[...truncated 9056 lines...]
 Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
 Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
 Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
+Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_2.pem
 Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
 Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G2.pem
 Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
-Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_2.pem
+Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
+Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
 Adding debian:Verisign_Class_4_Public_Primary_Certification_Authority_-_G3.pem
+Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
 Adding debian:Visa_eCommerce_Root.pem
 Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
-Adding debian:WoSign.pem
 Adding debian:WoSign_China.pem
+Adding debian:WoSign.pem
 Adding debian:XRamp_Global_CA_Root.pem
-Adding debian:certSIGN_ROOT_CA.pem
-Adding debian:ePKI_Root_Certification_Authority.pem
-Adding debian:thawte_Primary_Root_CA.pem
-Adding debian:thawte_Primary_Root_CA_-_G2.pem
-Adding debian:thawte_Primary_Root_CA_-_G3.pem
 Adding debian:spi-cacert-2008.pem
 done.
 done.
-Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.31.7-1) ...
-Reading package lists...
-Building dependency tree...
-Reading state information...
-Reading extended state information...
-Initializing package states...
-Writing extended state information...
-Building tag database...
+Traitement des actions différées (« triggers ») pour libgdk-pixbuf2.0-0:amd64 (2.31.7-1) ...
+Lecture des listes de paquets...
+Construction de l'arbre des dépendances...
+Lecture des informations d'état...
+Lecture de l'information d'état étendu...
+Initialisation de l'état des paquets...
+Écriture de l'information d'état étendu...
+Construction de la base de données des étiquettes...
  -> Finished parsing the build-deps
-Reading package lists...
-Building dependency tree...
-Reading state information...
-fakeroot is already the newest version.
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+Lecture des listes de paquets…
+Construction de l'arbre des dépendances…
+Lecture des informations d'état…
+fakeroot est déjà la plus récente version disponible.
+0 mis à jour, 0 nouvellement installés, 0 à enlever et 0 non mis à jour.
 I: Copying source file
 I: copying [indigo_1.1.12-1.dsc]
 I: copying [./indigo_1.1.12.orig.tar.gz]
 I: copying [./indigo_1.1.12-1.debian.tar.xz]
 I: Extracting source
 gpgv: keyblock resource `/tmp/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Feb 11 09:50:09 2014 GMT+12 using DSA key ID 088F6B8C
+gpgv: Signature made mer 12 fév 2014 11:50:09 GMT-14 using DSA key ID 088F6B8C
 gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./indigo_1.1.12-1.dsc
-dpkg-source: info: extracting indigo in indigo-1.1.12
-dpkg-source: info: unpacking indigo_1.1.12.orig.tar.gz
-dpkg-source: info: unpacking indigo_1.1.12-1.debian.tar.xz
-dpkg-source: info: applying library_dir_and_name.patch
-dpkg-source: info: applying tinyxml_fix_undefined_symbol.patch
-dpkg-source: info: applying java_wrappers.patch
+dpkg-source: avertissement: impossible de vérifier la signature sur ./indigo_1.1.12-1.dsc
+dpkg-source: info: extraction de indigo dans indigo-1.1.12
+dpkg-source: info: extraction de indigo_1.1.12.orig.tar.gz
+dpkg-source: info: extraction de indigo_1.1.12-1.debian.tar.xz
+dpkg-source: info: mise en place de library_dir_and_name.patch
+dpkg-source: info: mise en place de tinyxml_fix_undefined_symbol.patch
+dpkg-source: info: mise en place de java_wrappers.patch
 I: Building the package
-I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" dpkg-buildpackage -us -uc  -b -rfakeroot
-dpkg-buildpackage: source package indigo
-dpkg-buildpackage: source version 1.1.12-1
-dpkg-buildpackage: source distribution unstable
-dpkg-buildpackage: source changed by Debichem Team <debichem-devel at lists.alioth.debian.org>
+W: no hooks of type A found -- ignoring
+I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" dpkg-buildpackage -us -uc  -b -rfakeroot
+dpkg-buildpackage: paquet source indigo
+dpkg-buildpackage: version source 1.1.12-1
+dpkg-buildpackage: distribution source unstable
+dpkg-buildpackage: source changé par Debichem Team <debichem-devel at lists.alioth.debian.org>
  dpkg-source --before-build indigo-1.1.12
-dpkg-buildpackage: host architecture amd64
+dpkg-buildpackage: architecture hôte amd64
  fakeroot debian/rules clean
 dh clean --with autotools_dev,javahelper,python2 --parallel
    dh_testdir -O--parallel
@@ -2236,8 +2246,8 @@
 /usr/bin/cmake -E cmake_progress_report /tmp/buildd/indigo-1.1.12/build_scripts/indigo-utils/CMakeFiles 
 [ 61%] Building CXX object indigo/reaction/CMakeFiles/reaction.dir/src/reaction_transformation.cpp.o
 cd /tmp/buildd/indigo-1.1.12/build_scripts/indigo-utils/indigo/reaction && /usr/bin/c++    -include /tmp/buildd/indigo-1.1.12/common/cmake/../hacks/gcc_preinclude.h -include /tmp/buildd/indigo-1.1.12/common/cmake/../hacks/gcc_preinclude.h -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -m64 -m64 -I/tmp/buildd/indigo-1.1.12/common -I/tmp/buildd/indigo-1.1.12/common/..     -fvisibility=hidden -fPIC -fvisibility=hidden -fPIC -fvisibility=hidden -fPIC -o CMakeFiles/reaction.dir/src/reaction_transformation.cpp.o -c /tmp/buildd/indigo-1.1.12/reaction/src/reaction_transformation.cpp
-/tmp/buildd/indigo-1.1.12/reaction/src/reaction_transformation.cpp: In member function 'void indigo::ReactionTransformation::_mergeReactionComponents(indigo::QueryReaction&, int, indigo::QueryMolecule&, indigo::Array<int>&)':
-/tmp/buildd/indigo-1.1.12/reaction/src/reaction_transformation.cpp:147:63: warning: passing NULL to non-pointer argument 3 of 'void indigo::BaseMolecule::mergeWithMolecule(indigo::BaseMolecule&, indigo::Array<int>*, int)' [-Wconversion-null]
+/tmp/buildd/indigo-1.1.12/reaction/src/reaction_transformation.cpp: In member function ‘void indigo::ReactionTransformation::_mergeReactionComponents(indigo::QueryReaction&, int, indigo::QueryMolecule&, indigo::Array<int>&)’:
+/tmp/buildd/indigo-1.1.12/reaction/src/reaction_transformation.cpp:147:63: warning: passing NULL to non-pointer argument 3 of ‘void indigo::BaseMolecule::mergeWithMolecule(indigo::BaseMolecule&, indigo::Array<int>*, int)’ [-Wconversion-null]
        merged_molecule.mergeWithMolecule(molecule_i, NULL, NULL);
                                                                ^
 /usr/bin/cmake -E cmake_progress_report /tmp/buildd/indigo-1.1.12/build_scripts/indigo-utils/CMakeFiles 88
@@ -2877,46 +2887,59 @@
 dh_makeshlibs -V
 make[1]: Leaving directory '/tmp/buildd/indigo-1.1.12'
    dh_shlibdeps -O--parallel
-dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/indigo-utils/usr/bin/indigo-deco was not linked against libstdc++.so.6 (it uses none of the library's symbols)
-dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/indigo-utils/usr/bin/indigo-deco was not linked against libgcc_s.so.1 (it uses none of the library's symbols)
+dpkg-shlibdeps: avertissement: la dépendance pourrait être évitée si « debian/indigo-utils/usr/bin/indigo-deco » n'y était pas lié avec libgcc_s.so.1 sans nécessité (il n'utilise aucun des symboles de la bibliothèque)
+dpkg-shlibdeps: avertissement: la dépendance pourrait être évitée si « debian/indigo-utils/usr/bin/indigo-deco » n'y était pas lié avec libstdc++.so.6 sans nécessité (il n'utilise aucun des symboles de la bibliothèque)
    dh_installdeb -O--parallel
    dh_gencontrol -O--parallel
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: Depends field of package libindigo-dev: unknown substitution variable ${shlibs:Depends}
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: Depends field of package python-indigo: unknown substitution variable ${shlibs:Depends}
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: package python-indigo: unused substitution variable ${python:Provides}
-dpkg-gencontrol: warning: package python-indigo: unused substitution variable ${python:Versions}
-dpkg-gencontrol: warning: Depends field of package libindigo-java: unknown substitution variable ${shlibs:Depends}
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: champ Depends du paquet libindigo-dev : variable de substitution inconnue ${shlibs:Depends}
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: champ Depends du paquet python-indigo : variable de substitution inconnue ${shlibs:Depends}
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: paquet python-indigo : variable de substitution inutilisée ${python:Provides}
+dpkg-gencontrol: avertissement: paquet python-indigo : variable de substitution inutilisée ${python:Versions}
+dpkg-gencontrol: avertissement: champ Depends du paquet libindigo-java : variable de substitution inconnue ${shlibs:Depends}
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
    dh_md5sums -O--parallel
    dh_builddeb -O--parallel
-dpkg-deb: building package 'libindigo0d-dbgsym' in '../libindigo0d-dbgsym_1.1.12-1_amd64.deb'.
-dpkg-deb: building package 'libindigo-java' in '../libindigo-java_1.1.12-1_all.deb'.
-dpkg-deb: building package 'libindigo-dev' in '../libindigo-dev_1.1.12-1_amd64.deb'.
-dpkg-deb: building package 'python-indigo' in '../python-indigo_1.1.12-1_all.deb'.
-dpkg-deb: building package 'indigo-utils-dbgsym' in '../indigo-utils-dbgsym_1.1.12-1_amd64.deb'.
-dpkg-deb: building package 'indigo-utils' in '../indigo-utils_1.1.12-1_amd64.deb'.
-dpkg-deb: building package 'libindigo0d' in '../libindigo0d_1.1.12-1_amd64.deb'.
+dpkg-deb : construction du paquet « libindigo-dev » dans « ../libindigo-dev_1.1.12-1_amd64.deb ».
+dpkg-deb : construction du paquet « libindigo-java » dans « ../libindigo-java_1.1.12-1_all.deb ».
+dpkg-deb : construction du paquet « libindigo0d-dbgsym » dans « ../libindigo0d-dbgsym_1.1.12-1_amd64.deb ».
+dpkg-deb : construction du paquet « indigo-utils-dbgsym » dans « ../indigo-utils-dbgsym_1.1.12-1_amd64.deb ».
+dpkg-deb : construction du paquet « python-indigo » dans « ../python-indigo_1.1.12-1_all.deb ».
+dpkg-deb : construction du paquet « indigo-utils » dans « ../indigo-utils_1.1.12-1_amd64.deb ».
+dpkg-deb : construction du paquet « libindigo0d » dans « ../libindigo0d_1.1.12-1_amd64.deb ».
  dpkg-genbuildinfo  >../indigo_1.1.12-1_amd64.buildinfo
  dpkg-distaddfile indigo_1.1.12-1_amd64.buildinfo science extra
-dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe
+dpkg-distaddfile: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
  dpkg-genchanges -b >../indigo_1.1.12-1_amd64.changes
-dpkg-genchanges: warning: package indigo-utils-dbgsym listed in files list but not in control info
-dpkg-genchanges: warning: package libindigo0d-dbgsym listed in files list but not in control info
-dpkg-genchanges: binary-only upload (no source code included)
+dpkg-genchanges: avertissement: paquet libindigo0d-dbgsym listé dans le fichier de liste des fichiers mais pas dans le fichier info
+dpkg-genchanges: avertissement: paquet indigo-utils-dbgsym listé dans le fichier de liste des fichiers mais pas dans le fichier info
+dpkg-genchanges: envoi des binaires seulement (le code source n'est pas inclus)
  dpkg-source --after-build indigo-1.1.12
-dpkg-buildpackage: binary-only upload (no source included)
+dpkg-buildpackage: envoi d'un binaire seulement (aucune inclusion de code source)
+W: no hooks of type B found -- ignoring
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+	LANGUAGE = (unset),
+	LC_ALL = "fr_CH.UTF-8",
+	LANG = "fr_CH.UTF-8"
+    are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
 I: unmounting /sys filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 163: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
 I: unmounting /dev/shm filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 163: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
 I: unmounting dev/pts filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 163: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
 I: unmounting run/shm filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 163: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
 I: unmounting proc filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 163: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
 I: cleaning the build env 
-I: removing directory /var/cache/pbuilder/build//3671 and its subdirectories
-I: Current time: Sun Sep 20 04:07:32 GMT+12 2015
-I: pbuilder-time-stamp: 1442765252
+I: removing directory /var/cache/pbuilder/build//33073 and its subdirectories
+I: Current time: Mon Sep 21 06:21:27 GMT-14 2015
+I: pbuilder-time-stamp: 1442766087

Compressing the 2nd log...
/var/lib/jenkins/userContent/reproducible/logdiffs/unstable/amd64/indigo_1.1.12-1.diff:	 86.6% -- replaced with /var/lib/jenkins/userContent/reproducible/logdiffs/unstable/amd64/indigo_1.1.12-1.diff.gz
b2/build.log:	 92.7%
+ echo 'Compressing the 1st log...'
Compressing the 1st log...
+ gzip -9cvn b1/build.log
b1/build.log:	 92.8%
+ chmod 644 /var/lib/jenkins/userContent/reproducible/logs/unstable/amd64/indigo_1.1.12-1.build1.log.gz
+ update_rbuildlog
+ chmod 644 /srv/reproducible-results/tmp.JQLOKjh2rd/tmp.OUt1d03amw
+ mv /srv/reproducible-results/tmp.JQLOKjh2rd/tmp.OUt1d03amw /var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log
+ RBUILDLOG=/var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log
+ '[' 0 -eq 1 ']'
+ '[' 0 -eq 0 ']'
+ call_diffoscope_on_changes_files
++ mktemp --tmpdir=/srv/reproducible-results/tmp.JQLOKjh2rd
+ local TMPLOG=/srv/reproducible-results/tmp.JQLOKjh2rd/tmp.pChkEJsuvJ
+ echo
+ tee -a /var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log

+ local TIMEOUT=30m
+ DBDSUITE=unstable
+ '[' unstable = experimental ']'
+ set -x
++ mktemp --tmpdir=/srv/reproducible-results/tmp.JQLOKjh2rd -d dbd-tmp-XXXXXXX
+ local TEMP=/srv/reproducible-results/tmp.JQLOKjh2rd/dbd-tmp-EpIB5iU
++ schroot --directory /srv/reproducible-results/tmp.JQLOKjh2rd -c source:jenkins-reproducible-unstable-diffoscope diffoscope -- --version
+ DIFFOSCOPE='diffoscope 34'
++ grep '^E: 15binfmt: update-binfmts: unable to open'
++ echo diffoscope 34
+ LOG_RESULT=
+ cleanup_all
+ '[' 0 -eq 1 ']'
+ '[' '' = failure ']'
+ '[' '!' -z '' ']'
+ gzip -9fvn /var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log
/var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log:	 92.3% -- replaced with /var/lib/jenkins/userContent/reproducible/rbuild/unstable/amd64/indigo_1.1.12-1.rbuild.log.gz
+ '[' ng = legacy ']'
+ '[' ng = ng ']'
+ gen_package_html indigo
+ cd /srv/jenkins/bin
+ python3 -c 'import reproducible_html_packages as rep
pkg = rep.Package('\''indigo'\'', no_notes=True)
rep.gen_packages_html([pkg], no_clean=True)'
INFO: Starting at 2015-09-20 16:21:10.448591
CRITICAL: buildinfo not detected at /var/lib/jenkins/userContent/reproducible/buildinfo/unstable/amd64/indigo_1.1.12-1_amd64.buildinfo
INFO: Finished at 2015-09-20 16:21:10.455682, took: 0:00:00.007100
+ cd -
+ cd
+ rm -r /srv/reproducible-results/tmp.JQLOKjh2rd
+ false
+ rm -f /tmp/reproducible-lockfile-unstable-amd64-indigo
Sun 20 Sep 16:21:10 UTC 2015 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-yfTxWBuc, which will now be removed.
Build step 'Execute shell' marked build as failure

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