[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_armhf_32 #3680
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Sat May 28 10:37:00 UTC 2016
See <https://jenkins.debian.net/job/reproducible_builder_armhf_32/3680/>
------------------------------------------
[...truncated 2832 lines...]
make[4]: Leaving directory '/build/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/modules'
Making install in tools
make[3]: Entering directory '/build/gerris-20131206+dfsg/tools'
make[4]: Entering directory '/build/gerris-20131206+dfsg/tools'
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/bash ../libtool --silent --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/build/gerris-20131206+dfsg/tools'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/tools'
Making install in test
make[3]: Entering directory '/build/gerris-20131206+dfsg/test'
make[4]: Entering directory '/build/gerris-20131206+dfsg/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/build/gerris-20131206+dfsg/test'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/test'
Making install in doc
make[3]: Entering directory '/build/gerris-20131206+dfsg/doc'
Making install in tutorial
make[4]: Entering directory '/build/gerris-20131206+dfsg/doc/tutorial'
make[5]: Entering directory '/build/gerris-20131206+dfsg/doc/tutorial'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/build/gerris-20131206+dfsg/doc/tutorial'
make[4]: Leaving directory '/build/gerris-20131206+dfsg/doc/tutorial'
Making install in examples
make[4]: Entering directory '/build/gerris-20131206+dfsg/doc/examples'
make install-am
make[5]: Entering directory '/build/gerris-20131206+dfsg/doc/examples'
make[6]: Entering directory '/build/gerris-20131206+dfsg/doc/examples'
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c gfs2doc gfs-highlight gfsxref '/build/gerris-20131206+dfsg/debian/tmp/usr/bin'
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/build/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[6]: Leaving directory '/build/gerris-20131206+dfsg/doc/examples'
make[5]: Leaving directory '/build/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/build/gerris-20131206+dfsg/doc/examples'
Making install in manpages
make[4]: Entering directory '/build/gerris-20131206+dfsg/doc/manpages'
make[5]: Entering directory '/build/gerris-20131206+dfsg/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
/usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/build/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
make[5]: Leaving directory '/build/gerris-20131206+dfsg/doc/manpages'
make[4]: Leaving directory '/build/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/build/gerris-20131206+dfsg/doc'
make[5]: Entering directory '/build/gerris-20131206+dfsg/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/build/gerris-20131206+dfsg/doc'
make[4]: Leaving directory '/build/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/doc'
Making install in desktop
make[3]: Entering directory '/build/gerris-20131206+dfsg/desktop'
make[4]: Entering directory '/build/gerris-20131206+dfsg/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/build/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
/usr/bin/install -c -m 644 gerris.xml '/build/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
make[4]: Leaving directory '/build/gerris-20131206+dfsg/desktop'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/desktop'
Making install in debian
make[3]: Entering directory '/build/gerris-20131206+dfsg/debian'
make[4]: Entering directory '/build/gerris-20131206+dfsg/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/build/gerris-20131206+dfsg/debian'
make[3]: Leaving directory '/build/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/build/gerris-20131206+dfsg'
make[4]: Entering directory '/build/gerris-20131206+dfsg'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/build/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
/usr/bin/install -c build_function libtool '/build/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[4]: Leaving directory '/build/gerris-20131206+dfsg'
make[3]: Leaving directory '/build/gerris-20131206+dfsg'
make[2]: Leaving directory '/build/gerris-20131206+dfsg'
find /build/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f
sed -i -e "s/mpicc/gcc/g" /build/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function
rm -rf /build/gerris-20131206+dfsg/debian/tmp/usr/bin/darcs2dist
rm -rf /build/gerris-20131206+dfsg/debian/tmp/usr/bin/gfs2doc
make[1]: Leaving directory '/build/gerris-20131206+dfsg'
dh_install -O--parallel
dh_installdocs -O--parallel
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/build/gerris-20131206+dfsg'
dh_installchangelogs ChangeLog
make[1]: Leaving directory '/build/gerris-20131206+dfsg'
dh_installman -O--parallel
dh_lintian -O--parallel
dh_icons -O--parallel
dh_perl -O--parallel
dh_link -O--parallel
dh_strip_nondeterminism -O--parallel
dh_compress -O--parallel
dh_fixperms -O--parallel
dh_strip -O--parallel
dh_makeshlibs -O--parallel
dh_shlibdeps -O--parallel
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/shapes debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/gerris3D debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 were not linked against libgmodule-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 were not linked against libgcc_s.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/shapes debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/gerris3D debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0 debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0 were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dh_installdeb -O--parallel
dh_gencontrol -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package libgfs-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -O--parallel
dh_builddeb -O--parallel
dpkg-deb: building package 'gerris-dbgsym' in '../gerris-dbgsym_20131206+dfsg-8_armhf.deb'.
dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-8_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2-dbgsym' in '../libgfs-1.3-2-dbgsym_20131206+dfsg-8_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2' in '../libgfs-1.3-2_20131206+dfsg-8_armhf.deb'.
dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-8_armhf.deb'.
dpkg-distaddfile gerris_20131206+dfsg-8_armhf.buildinfo science optional
dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any,all >../gerris_20131206+dfsg-8_armhf.changes
dpkg-genchanges: warning: package gerris-dbgsym listed in files list but not in control info
dpkg-genchanges: warning: package libgfs-1.3-2-dbgsym listed in files list but not in control info
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build gerris-20131206+dfsg
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
I: unmounting /sys filesystem
I: unmounting /dev/shm filesystem
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/21943 and its subdirectories
I: Current time: Fri May 27 22:34:19 GMT+12 2016
I: pbuilder-time-stamp: 1464431659
+ PRESULT=0
+ '[' 0 -eq 124 ']'
+ false
+ set +x
Sat May 28 10:34:19 UTC 2016 - build #1 for gerris/testing/armhf on opi2a done.
/srv/reproducible-results/rbuild-debian-uWYZ01sD/tmp.psEyf8leuA: 90.2% -- replaced with /srv/reproducible-results/rbuild-debian-uWYZ01sD/tmp.psEyf8leuA.gz
Sat May 28 10:34:20 UTC 2016 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-laE4OqhO, which will now be removed.
/srv/reproducible-results/rbuild-debian-3i2GNkF3:
total 16
drwxr-xr-x 2 jenkins jenkins 4096 May 28 10:34 b1
drwxr-xr-x 2 jenkins jenkins 4096 May 28 09:32 b2
-rw-r--r-- 1 jenkins jenkins 2331 May 22 19:12 gerris_20131206+dfsg-8.dsc
-rw------- 1 jenkins jenkins 3050 May 28 09:32 tmp.4UDDOgENag
/srv/reproducible-results/rbuild-debian-3i2GNkF3/b1:
total 6084
-rw-r--r-- 1 jenkins jenkins 245699 May 28 10:34 build.log
-rw-r--r-- 1 jenkins jenkins 358858 May 28 10:34 gerris-dbgsym_20131206+dfsg-8_armhf.deb
-rw-r--r-- 1 jenkins jenkins 16392 May 28 10:34 gerris_20131206+dfsg-8.debian.tar.xz
-rw-r--r-- 1 jenkins jenkins 2331 May 28 10:34 gerris_20131206+dfsg-8.dsc
-rw-r--r-- 1 jenkins jenkins 7602 May 28 10:34 gerris_20131206+dfsg-8_armhf.buildinfo
-rw-r--r-- 1 jenkins jenkins 2547 May 28 10:34 gerris_20131206+dfsg-8_armhf.changes
-rw-r--r-- 1 jenkins jenkins 282340 May 28 10:34 gerris_20131206+dfsg-8_armhf.deb
-rw-r--r-- 1 jenkins jenkins 2834149 May 28 10:34 gerris_20131206+dfsg.orig.tar.gz
-rw-r--r-- 1 jenkins jenkins 1840628 May 28 10:34 libgfs-1.3-2-dbgsym_20131206+dfsg-8_armhf.deb
-rw-r--r-- 1 jenkins jenkins 490730 May 28 10:34 libgfs-1.3-2_20131206+dfsg-8_armhf.deb
-rw-r--r-- 1 jenkins jenkins 102974 May 28 10:34 libgfs-dev_20131206+dfsg-8_armhf.deb
/srv/reproducible-results/rbuild-debian-3i2GNkF3/b2:
total 0
====================================================================================
Sat May 28 10:34:42 UTC 2016 - running /srv/jenkins/bin/reproducible_build.sh () on cbxi4b now.
To learn to understand this, clone git.debian.org/git/qa/jenkins.debian.net.git
and then have a look at the files README, INSTALL, CONTRIBUTING and maybe TODO.
This invocation of this script, which is located in bin/reproducible_build.sh, has been called using "2 gerris testing /srv/reproducible-results/rbuild-debian-3i2GNkF3" as arguments.
====================================================================================
Sat May 28 10:34:42 UTC 2016 - start running "/srv/jenkins/bin/reproducible_build.sh" (md5sum 5bd61aaa2fb4ace125ffdc5c671625ff) as "/tmp/jenkins-script-1fQkKk10" on cbxi4b.
Reading package lists...
NOTICE: 'gerris' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-science/packages/gerris.git
Please use:
git clone https://anonscm.debian.org/git/debian-science/packages/gerris.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2853 kB of source archives.
Get:1 http://ftp.us.debian.org/debian testing/main gerris 20131206+dfsg-8 (dsc) [2331 B]
Get:2 http://ftp.us.debian.org/debian testing/main gerris 20131206+dfsg-8 (tar) [2834 kB]
Get:3 http://ftp.us.debian.org/debian testing/main gerris 20131206+dfsg-8 (diff) [16.4 kB]
Fetched 2853 kB in 0s (6194 kB/s)
Download complete and in download only mode
=============================================================================
Re-Building gerris in testing on armhf on cbxi4b.dyn.aikidev.net now.
Date: Sat May 28 03:34:47 PDT 2016
Date UTC: Sat May 28 10:34:47 UTC 2016
=============================================================================
++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian-3i2GNkF3
+ local TMPCFG=/srv/reproducible-results/rbuild-debian-3i2GNkF3/pbuilderrc_bvNd
+ NEW_NUM_CPU=4
+ case $ARCH in
+ locale=fr_CH
+ language=fr
+ cat
+ set +e
+ sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian-3i2GNkF3/pbuilderrc_bvNd --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts '-b --buildinfo-identifier=armhf' --basetgz /var/cache/pbuilder/testing-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian-3i2GNkF3/b2 --logfile b2/build.log gerris_20131206+dfsg-8.dsc
W: /root/.pbuilderrc does not exist
I: Logging to b2/build.log
I: using fakeroot in build.
I: pbuilder: network access will be disabled during build
I: Current time: dimanche 29 mai 2016, 00:34:49 (UTC+1400)
I: pbuilder-time-stamp: 1464431689
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/testing-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /run/shm filesystem
I: mounting /dev/pts filesystem
I: Mounting /dev/shm
I: Mounting /sys
I: policy-rc.d already exists
W: no hooks of type H found -- ignoring
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/20298/tmp/hooks/D01_modify_environment starting
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
/srv/reproducible-results/rbuild-debian-3i2GNkF3/tmp.4UDDOgENag: 89.8% -- replaced with /srv/reproducible-results/rbuild-debian-3i2GNkF3/tmp.4UDDOgENag.gz
FATAL: null
java.lang.NullPointerException
at hudson.plugins.build_timeout.BuildTimeoutWrapper$EnvironmentImpl.tearDown(BuildTimeoutWrapper.java:199)
at hudson.model.Build$BuildExecution.doRun(Build.java:173)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
at hudson.model.Run.execute(Run.java:1738)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:98)
at hudson.model.Executor.run(Executor.java:410)
INFO: Starting at 2016-05-28 10:37:00.062223
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