[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_armhf_22 #5154
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Wed Jul 6 08:07:56 UTC 2016
See <https://jenkins.debian.net/job/reproducible_builder_armhf_22/5154/>
------------------------------------------
[...truncated 2378 lines...]
-- Creating destination directory structure:
-- arch - Debian - bin
-- - include
-- - lib
-- - share
-------------------------------------------
-------------------------------------------
-- Parallele compilation with make -j4
-------------------------------------------
- [34myou ve chosen not to install "blas" [0m
- [34myou ve chosen not to install "hdf5" [0m
- [34myou ve chosen not to install "med" [0m
- [34myou ve chosen not to install "mpi" [0m
- [34myou ve chosen not to install "metis" [0m
- [34myou ve chosen not to install "scotch" [0m
- [34myou ve chosen not to install "ple" [0m
***************************************************
* Installation PROFILE *
***************************************************
!!! /build/syrthes-4.3.0-dfsg1/src//syrthes.profile_Debian
SYRTHES4_HOME=/build/syrthes-4.3.0-dfsg1/arch/Debian
NOM_ARCH=Debian
source /build/syrthes-4.3.0-dfsg1/arch/Debian/bin/syrthes.profile
Configure file Makefile.in for installation
[32m Installation of convert2syrthes4 on architecture Debian [0m
syrthesconvert INSTALL 0
[32m Installation of syrthes4ensight on architecture Debian [0m
syrthesensight INSTALL 0
[32m Installation of syrthes4med3 on architecture Debian [0m
syrthesmed INSTALL 0
[32m Installation of ppfunc on architecture Debian [0m
syrthesppfuncINSTALL 0
[32m Installation of syrthes-pp on architecture Debian [0m
syrthesppINSTALL 0
[32m Installation of syrthes-post on architecture Debian [0m
Installation of syrthesseq on architecture Debian
make syrthesseq NOM_ARCH=Debian SYRTHES4_HOME='/build/syrthes-4.3.0-dfsg1' 2>&1 | tee syrthesseq.log
syrthesseqINSTALL 0
[32m Installation of syrthesmpi on architecture Debian [0m
[32m Installation of syrthescfd on architecture Debian [0m
- [34myou ve chosen not to install "gui" [0m
function report
NO file ERREUR.log
----------------------------------------------------------
Before using SYRTHES, each user must[34m source[0m
the[34m /build/syrthes-4.3.0-dfsg1/arch/Debian/bin/syrthes.profile[0m file before using the code.
The easiest way is to put the following lines in each of the users
[34m '.profile'[0m or [34m'.bashrc'[0m (depending on the shell)
syrthesprofile=/build/syrthes-4.3.0-dfsg1/arch/Debian/bin/syrthes.profile
#(adjust path to your system)
if [ -f $syrthesprofile ] ; then
. $syrthesprofile
fi
---------------------------------------------------------
[31mThank you for choosing SYRTHES[0m
# ERREUR.log should be empty
if [ -s "src/syrthes-install/ERREUR.log" ]; then \
cat "src/syrthes-install/ERREUR.log" && false; \
fi
make[1]: Leaving directory '/build/syrthes-4.3.0-dfsg1'
dh_auto_test
fakeroot debian/rules binary
dh binary --with python2
dh_testroot
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/syrthes-4.3.0-dfsg1'
mv src/syrthes-gui/src/install arch/Debian/syrthes-gui
sed -i 's:/build/syrthes-4.3.0-dfsg1/arch/Debian:/usr/lib/syrthes:;s/-I -I/-I/;s/-L -L/-L/' \
arch/Debian/bin/syrthes.profile \
arch/Debian/share/syrthes/Makefile.in
# Fix unwanted exec flags (not catched by dh_fixperms)
chmod -R a-x arch/Debian/syrthes-gui/*
chmod -R a+X arch/Debian/syrthes-gui/*
chmod -R a-x arch/Debian/share/syrthes/tests/*
chmod -R a+X arch/Debian/share/syrthes/tests/*
chmod a+x arch/Debian/share/syrthes/tests/*/syrthes/syrthes.py
chmod a-x arch/Debian/share/syrthes/*.c
chmod a-x arch/Debian/include/*
# Remove extra license file
rm arch/Debian/syrthes-gui/22x22/license
make[1]: Leaving directory '/build/syrthes-4.3.0-dfsg1'
dh_install
dh_installdocs
dh_installchangelogs
dh_installman
debian/rules override_dh_python2
make[1]: Entering directory '/build/syrthes-4.3.0-dfsg1'
dh_python2 -N syrthes-tests
W: dh_python2:479: Please add dh-python package to Build-Depends
make[1]: Leaving directory '/build/syrthes-4.3.0-dfsg1'
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_strip
dh_makeshlibs
dh_shlibdeps
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/syrthes-tools/usr/lib/syrthes/bin/syrthes4ensight debian/syrthes-tools/usr/lib/syrthes/bin/syrthes-ppfunc debian/syrthes-tools/usr/lib/syrthes/bin/convert2syrthes4 debian/syrthes-tools/usr/lib/syrthes/bin/syrthes4med30 debian/syrthes-tools/usr/lib/syrthes/bin/syrthes-post debian/syrthes-tools/usr/lib/syrthes/bin/syrthes-pp were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/syrthes-tools/usr/lib/syrthes/bin/syrthes-pp was not linked against libscotcherr-5.1.so (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/syrthes-tools/usr/lib/syrthes/bin/convert2syrthes4 debian/syrthes-tools/usr/lib/syrthes/bin/syrthes4med30 were not linked against libhdf5_openmpi.so.10 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/syrthes-tools/usr/lib/syrthes/bin/syrthes4ensight was not linked against libz.so.1 (it uses none of the library's symbols)
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: Depends field of package syrthes: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package syrthes-tests: unknown substitution variable ${python:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums
dh_builddeb
dpkg-deb: building package 'syrthes-tests' in '../syrthes-tests_4.3.0-dfsg1-1_all.deb'.
dpkg-deb: building package 'syrthes-tools-dbgsym' in '../syrthes-tools-dbgsym_4.3.0-dfsg1-1_armhf.deb'.
dpkg-deb: building package 'syrthes-gui' in '../syrthes-gui_4.3.0-dfsg1-1_all.deb'.
dpkg-deb: building package 'syrthes' in '../syrthes_4.3.0-dfsg1-1_armhf.deb'.
dpkg-deb: building package 'syrthes-tools' in '../syrthes-tools_4.3.0-dfsg1-1_armhf.deb'.
dpkg-distaddfile syrthes_4.3.0-dfsg1-1_armhf.buildinfo science extra
dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any,all >../syrthes_4.3.0-dfsg1-1_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build syrthes-4.3.0-dfsg1
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
I: unmounting /sys filesystem
I: unmounting /dev/shm filesystem
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/15164 and its subdirectories
I: Current time: Tue Jul 5 20:04:12 GMT+12 2016
I: pbuilder-time-stamp: 1467792252
+ PRESULT=0
+ '[' 0 -eq 124 ']'
+ false
+ set +x
Wed Jul 6 08:04:12 UTC 2016 - build #1 for syrthes/testing/armhf on ff2a done.
/srv/reproducible-results/rbuild-debian-zjHpTQlH/tmp.SAAWn0XXUv: 90.8% -- replaced with /srv/reproducible-results/rbuild-debian-zjHpTQlH/tmp.SAAWn0XXUv.gz
Wed Jul 6 08:04:12 UTC 2016 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-r9KrLOsl, which will now be removed.
/srv/reproducible-results/rbuild-debian-cmI7Zr4n:
total 16
drwxr-xr-x 2 jenkins jenkins 4096 Jul 6 08:07 b1
drwxr-xr-x 2 jenkins jenkins 4096 Jul 6 07:34 b2
-rw-r--r-- 1 jenkins jenkins 1979 Jul 14 2015 syrthes_4.3.0-dfsg1-1.dsc
-rw------- 1 jenkins jenkins 2697 Jul 6 07:34 tmp.3pn2fyZuE2
/srv/reproducible-results/rbuild-debian-cmI7Zr4n/b1:
total 43112
-rw-r--r-- 1 jenkins jenkins 215192 Jul 6 08:04 build.log
-rw-r--r-- 1 jenkins jenkins 609712 Jul 6 08:04 syrthes-gui_4.3.0-dfsg1-1_all.deb
-rw-r--r-- 1 jenkins jenkins 16216804 Jul 6 08:05 syrthes-tests_4.3.0-dfsg1-1_all.deb
-rw-r--r-- 1 jenkins jenkins 173310 Jul 6 08:05 syrthes-tools-dbgsym_4.3.0-dfsg1-1_armhf.deb
-rw-r--r-- 1 jenkins jenkins 86542 Jul 6 08:05 syrthes-tools_4.3.0-dfsg1-1_armhf.deb
-rw-r--r-- 1 jenkins jenkins 12848 Jul 6 08:05 syrthes_4.3.0-dfsg1-1.debian.tar.xz
-rw-r--r-- 1 jenkins jenkins 1979 Jul 6 08:05 syrthes_4.3.0-dfsg1-1.dsc
-rw-r--r-- 1 jenkins jenkins 8684 Jul 6 08:05 syrthes_4.3.0-dfsg1-1_armhf.buildinfo
-rw-r--r-- 1 jenkins jenkins 2710 Jul 6 08:05 syrthes_4.3.0-dfsg1-1_armhf.changes
-rw-r--r-- 1 jenkins jenkins 385350 Jul 6 08:05 syrthes_4.3.0-dfsg1-1_armhf.deb
-rw-r--r-- 1 jenkins jenkins 26332421 Jul 6 08:07 syrthes_4.3.0-dfsg1.orig.tar.gz
/srv/reproducible-results/rbuild-debian-cmI7Zr4n/b2:
total 0
====================================================================================
Wed Jul 6 08:07:23 UTC 2016 - running /srv/jenkins/bin/reproducible_build.sh () on rpi2c now.
To learn to understand this, clone git.debian.org/git/qa/jenkins.debian.net.git
and then have a look at the files README, INSTALL, CONTRIBUTING and maybe TODO.
This invocation of this script, which is located in bin/reproducible_build.sh, has been called using "2 syrthes testing /srv/reproducible-results/rbuild-debian-cmI7Zr4n" as arguments.
====================================================================================
Wed Jul 6 08:07:23 UTC 2016 - start running "/srv/jenkins/bin/reproducible_build.sh" (md5sum daa760db5e0afb4bf67c2d852aabee24) as "/tmp/jenkins-script-QDNugyeG" on rpi2c.
Reading package lists...
NOTICE: 'syrthes' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-science/packages/syrthes.git
Please use:
git clone git://anonscm.debian.org/debian-science/packages/syrthes.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 26.3 MB of source archives.
Get:1 http://ftp.us.debian.org/debian testing/main syrthes 4.3.0-dfsg1-1 (dsc) [1979 B]
Get:2 http://ftp.us.debian.org/debian testing/main syrthes 4.3.0-dfsg1-1 (tar) [26.3 MB]
Get:3 http://ftp.us.debian.org/debian testing/main syrthes 4.3.0-dfsg1-1 (diff) [12.8 kB]
Fetched 26.3 MB in 5s (5144 kB/s)
Download complete and in download only mode
=============================================================================
Re-Building syrthes in testing on armhf on rpi2c.dyn.aikidev.net now.
Date: Wed Jul 6 08:07:34 UTC 2016
Date UTC: Wed Jul 6 08:07:34 UTC 2016
=============================================================================
++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian-cmI7Zr4n
+ local TMPCFG=/srv/reproducible-results/rbuild-debian-cmI7Zr4n/pbuilderrc_SZin
+ NEW_NUM_CPU=4
+ case $ARCH in
+ locale=it_CH
+ language=it
+ cat
+ set +e
+ sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian-cmI7Zr4n/pbuilderrc_SZin --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts '-b --buildinfo-identifier=armhf' --basetgz /var/cache/pbuilder/testing-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian-cmI7Zr4n/b2 --logfile b2/build.log syrthes_4.3.0-dfsg1-1.dsc
W: /root/.pbuilderrc does not exist
I: Logging to b2/build.log
I: using fakeroot in build.
I: pbuilder: network access will be disabled during build
I: Current time: mer 6 lug 2016, 22.07.35, GMT-14
I: pbuilder-time-stamp: 1467792455
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/testing-reproducible-base.tgz]
/srv/reproducible-results/rbuild-debian-cmI7Zr4n/tmp.3pn2fyZuE2: 90.4% -- replaced with /srv/reproducible-results/rbuild-debian-cmI7Zr4n/tmp.3pn2fyZuE2.gz
INFO: Starting at 2016-07-06 08:07:53.358324
INFO: Finished at 2016-07-06 08:07:53.827405, took: 0:00:00.469096
INFO: Starting at 2016-07-06 08:07:54.087949
FATAL: null
java.lang.NullPointerException
at hudson.plugins.build_timeout.BuildTimeoutWrapper$EnvironmentImpl.tearDown(BuildTimeoutWrapper.java:199)
at hudson.model.Build$BuildExecution.doRun(Build.java:173)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
at hudson.model.Run.execute(Run.java:1738)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:98)
at hudson.model.Executor.run(Executor.java:410)
INFO: Finished at 2016-07-06 08:07:55.205033, took: 0:00:01.117108
rm: cannot remove ‘/srv/reproducible-results/rbuild-debian-cmI7Zr4n’: No such file or directory
Wed Jul 6 08:07:55 UTC 2016 - https://jenkins.debian.net/job/reproducible_builder_armhf_22/5154/console got remote error with exit code 143 from rpi2c-armhf-rb.debian.net for build #2 for syrthes on testing/armhf
Sleeping 5m before aborting the job.
More information about the Qa-jenkins-scm
mailing list