[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_armhf_8 #11377
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Thu Sep 8 15:12:35 UTC 2016
See <https://jenkins.debian.net/job/reproducible_builder_armhf_8/11377/>
------------------------------------------
[...truncated 1983 lines...]
^~~~~~~~~~~~~
gui_render.c:863:3: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "y ", 2) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c:865:3: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "z ", 2) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c: In function 'gui_camera_projection_changed':
gui_render.c:1019:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "ortho", 5) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c:1025:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "persp", 5) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c: In function 'gui_camera_mode_changed':
gui_render.c:1048:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "orig", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c:1053:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(text, "vari", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_render.c:39:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_render.c: In function 'povray_exec':
gui_render.c:440:1: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(cmd->str);
^~~~~~~~~~~~~~~~
gui_mdi.c: In function 'gromacs_genbox':
gui_mdi.c:177:1: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(cmd);
^~~~~~~~~~~
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_animate.o gui_animate.c
gui_animate.c: In function 'anim_next_frame':
gui_animate.c:336:5: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(text);
^~~~~~~~~~~~
gui_animate.c:347:3: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(text);
^~~~~~~~~~~~
gui_animate.c:350:3: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(text);
^~~~~~~~~~~~
In file included from /usr/include/string.h:635:0,
from gui_animate.c:25:
In function 'memcpy',
inlined from 'anim_read_all_frames' at gui_animate.c:112:5:
/usr/include/arm-linux-gnueabihf/bits/string3.h:53:10: warning: call to __builtin___memcpy_chk will always overflow destination buffer
return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_edit.o gui_edit.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_surface.o gui_surface.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_analysis.o gui_analysis.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_defect.o gui_defect.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_molsurf.o gui_molsurf.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_diffract.o gui_diffract.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_gms.o gui_gms.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_library.o gui_library.c
gui_gms.c: In function 'basis_selected':
gui_gms.c:360:3: warning: 'g_strcasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strcasecmp(label, basis_sets[i].label) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_gms.c:31:
/usr/include/glib-2.0/glib/gstrfuncs.h:200:23: note: declared here
gint g_strcasecmp (const gchar *s1,
^~~~~~~~~~~~
gui_gms.c: In function 'gms_functional_select':
gui_gms.c:378:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(label, "svwn", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_gms.c:31:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_gms.c:383:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(label, "blyp", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_gms.c:31:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_gms.c:388:1: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(label, "b3ly", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_gms.c:31:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_setup.o gui_setup.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_gperiodic.o gui_gperiodic.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_space.o gui_space.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_measure.o gui_measure.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_symmetry.o gui_symmetry.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_zmatrix.o gui_zmatrix.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_dialog.o gui_dialog.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_tree.o gui_tree.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_task.o gui_task.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_help.o gui_help.c
gui_help.c: In function 'help_init':
gui_help.c:92:3: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(line, "%topic ", 7) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_help.c:32:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_task.c: In function 'task_kill_tree':
gui_task.c:597:3: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(cmd);
^~~~~~~~~~~
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_monty.o gui_monty.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_job.o gui_job.c
gui_monty.c: In function 'select_cgf_file_dialog':
gui_monty.c:79:16: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
file_chooser = gtk_file_chooser_dialog_new("Select a CGF File",
^
gui_monty.c: In function 'select_surface_file_dialog':
gui_monty.c:117:16: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
file_chooser = gtk_file_chooser_dialog_new("Select a CGF File",
^
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dock.o dock.c
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o image.o image.c
dock.c: In function 'docking_cleanup':
dock.c:97:7: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(ext, ".res", 3) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from dock.c:30:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
dock.c: In function 'docking_execute':
dock.c:163:7: warning: ignoring return value of 'system', declared with attribute warn_unused_result [-Wunused-result]
system(cmd);
^~~~~~~~~~~
cc -g -O2 -fdebug-prefix-map=/build/gdis-0.90=. -fstack-protector-strong -Wformat -Werror=format-security `pkg-config --cflags gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -DWITH_GUI -UWITH_GRISU -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gui_grid.o gui_grid.c
gui_grid.c: In function 'gui_job_download':
gui_grid.c:574:5: warning: 'g_strncasecmp' is deprecated [-Wdeprecated-declarations]
if (g_strncasecmp(status, "done", 4) == 0)
^~
In file included from /usr/include/glib-2.0/glib.h:79:0,
from gdis.h:269,
from gui_grid.c:27:
/usr/include/glib-2.0/glib/gstrfuncs.h:203:23: note: declared here
gint g_strncasecmp (const gchar *s1,
^~~~~~~~~~~~~
gui_grid.c: In function 'gui_grid_dialog':
gui_grid.c:1094:3: warning: 'g_mutex_new' is deprecated [-Wdeprecated-declarations]
gui_grid_mutex = g_mutex_new();
^~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:107:0,
from gdis.h:269,
from gui_grid.c:27:
/usr/include/glib-2.0/glib/deprecated/gthread.h:277:17: note: declared here
GMutex * g_mutex_new (void);
^~~~~~~~~~~
cc main.o model.o coords.o connect.o matrix.o module.o task.o type.o measure.o parse.o edit.o elem.o select.o surface.o analysis.o spatial.o render.o numeric.o project.o grid.o molsurf.o hirshfeld.o zone.o contents.o quaternion.o zmatrix.o library.o geometry.o space.o sginfo.o sgclib.o sgio.o error.o scan.o camera.o defect.o colourlib.o crystal_graph.o mdi.o mesch.o mesch_core.o host.o job.o command.o undo.o count.o ff.o ff_gulp.o test.o file.o file_cif.o file_gulp.o file_gmf.o file_marvin.o file_xtl.o file_arc.o file_xyz.o file_fdf.o file_gms.o file_diff.o file_xml.o file_abinit.o file_pdb.o file_povray.o file_nwchem.o file_castep.o file_gauss.o file_rietica.o file_geomview.o file_cssr.o file_cel.o file_dmol.o file_dlpoly.o file_bgf.o file_cgf.o file_dlp.o file_gromacs.o file_meta.o gui_main.o gui_canvas.o gui_shorts.o gl_main.o gl_primitives.o gl_stereo.o gl_graph.o gl_varray.o gui_gulp.o gui_siesta.o gui_render.o gui_mdi.o gui_animate.o gui_edit.o gui_surface.o gui_analysis.o gui_defect.o gui_molsurf.o gui_diffract.o gui_gms.o gui_library.o gui_setup.o gui_gperiodic.o gui_space.o gui_measure.o gui_symmetry.o gui_zmatrix.o gui_dialog.o gui_tree.o gui_task.o gui_help.o gui_monty.o gui_job.o dock.o image.o gui_grid.o -Wl,-z,relro -Wl,--as-needed -o gdis `pkg-config --libs gtk+-2.0 gthread-2.0 gtkglext-1.0 gmodule-2.0` -lm
make[2]: Leaving directory '/build/gdis-0.90'
make[1]: Leaving directory '/build/gdis-0.90'
fakeroot debian/rules binary
dh binary --buildsystem=makefile --parallel
dh_testroot -O--buildsystem=makefile -O--parallel
dh_prep -O--buildsystem=makefile -O--parallel
dh_auto_install -O--buildsystem=makefile -O--parallel
debian/rules override_dh_install
make[1]: Entering directory '/build/gdis-0.90'
dh_install -XCVS
make[1]: Leaving directory '/build/gdis-0.90'
dh_installdocs -O--buildsystem=makefile -O--parallel
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/build/gdis-0.90'
dh_installchangelogs CHANGELOG
make[1]: Leaving directory '/build/gdis-0.90'
dh_installman -O--buildsystem=makefile -O--parallel
dh_installmenu -O--buildsystem=makefile -O--parallel
dh_perl -O--buildsystem=makefile -O--parallel
dh_link -O--buildsystem=makefile -O--parallel
dh_strip_nondeterminism -O--buildsystem=makefile -O--parallel
dh_compress -O--buildsystem=makefile -O--parallel
dh_fixperms -O--buildsystem=makefile -O--parallel
dh_strip -O--buildsystem=makefile -O--parallel
dh_makeshlibs -O--buildsystem=makefile -O--parallel
dh_shlibdeps -O--buildsystem=makefile -O--parallel
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gdis/usr/bin/gdis was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -O--buildsystem=makefile -O--parallel
dh_gencontrol -O--buildsystem=makefile -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -O--buildsystem=makefile -O--parallel
dh_builddeb -O--buildsystem=makefile -O--parallel
dpkg-deb: building package 'gdis-dbgsym' in '../gdis-dbgsym_0.90-5_armhf.deb'.
dpkg-deb: building package 'gdis-data' in '../gdis-data_0.90-5_all.deb'.
/srv/reproducible-results/rbuild-debian-uZLnEutl/tmp.FkuR46zFTl: 48.0% -- replaced with /srv/reproducible-results/rbuild-debian-uZLnEutl/tmp.FkuR46zFTl.gz
FATAL: null
java.lang.NullPointerException
at hudson.plugins.build_timeout.BuildTimeoutWrapper$EnvironmentImpl.tearDown(BuildTimeoutWrapper.java:199)
at hudson.model.Build$BuildExecution.doRun(Build.java:173)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
at hudson.model.Run.execute(Run.java:1741)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:98)
at hudson.model.Executor.run(Executor.java:410)
INFO: Starting at 2016-09-08 15:12:33.264983
INFO: Finished at 2016-09-08 15:12:33.663319, took: 0:00:00.398353
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