[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_amd64_32 #7270
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Fri Jan 6 03:48:06 UTC 2017
https://jenkins.debian.net/job/reproducible_builder_amd64_32/7270/------------------------------------------
[...truncated 2.30 MB...]
+copying build/lib.linux-x86_64-2.7/chempy/fragments/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fragments
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fast
+copying build/lib.linux-x86_64-2.7/chempy/fast/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fast
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/amber.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/keyword.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/realtime.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/state.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
+copying build/lib.linux-x86_64-2.7/chempy/mmtf/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
+copying build/lib.linux-x86_64-2.7/chempy/mmtf/io.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
running install_egg_info
-Writing /build/1st/pymol-1.8.4.0+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/pymol-1.8.4.0.egg-info
-creating /build/1st/pymol-1.8.4.0+dfsg/debian/tmp/usr/bin
+Writing /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/pymol-1.8.4.0.egg-info
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/bin
debian/rules override_dh_install
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
pdflatex -output-directory debian -jobname pymol-ref-card debian/pymolRef.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2016/Debian) (preloaded format=pdflatex)
restricted \write18 enabled.
@@ -2994,7 +3005,7 @@
dh_install data/shaders usr/lib/python2.7/dist-packages/pymol/data/
rm -rf debian/pymol/usr/lib/python2.7/dist-packages/pymol/data/
install -m 755 debian/pymol.launch debian/pymol/usr/bin/pymol
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
dh_installdocs -O--parallel
dh_installchangelogs -O--parallel
dh_installexamples -O--parallel
@@ -3008,14 +3019,14 @@
dh_link -O--parallel
dh_strip_nondeterminism -O--parallel
debian/rules override_dh_compress
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
dh_compress -Xpdb
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
debian/rules override_dh_fixperms
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
dh_fixperms
find debian/*/usr/share/pymol/data/xray/ -type f -name "*.dat" -exec chmod -x \{\} \;
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
dh_strip -O--parallel
dh_makeshlibs -O--parallel
dh_shlibdeps -O--parallel
@@ -3029,22 +3040,24 @@
dpkg-gencontrol: warning: package pymol-data: unused substitution variable ${python:Depends}
dh_md5sums -O--parallel
dh_builddeb -O--parallel
-dpkg-deb: building package 'pymol-data' in '../pymol-data_1.8.4.0+dfsg-1_all.deb'.
dpkg-deb: building package 'pymol-dbgsym' in '../pymol-dbgsym_1.8.4.0+dfsg-1_amd64.deb'.
+dpkg-deb: building package 'pymol-data' in '../pymol-data_1.8.4.0+dfsg-1_all.deb'.
dpkg-deb: building package 'pymol' in '../pymol_1.8.4.0+dfsg-1_amd64.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=binary >../pymol_1.8.4.0+dfsg-1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
- dpkg-source --after-build pymol-1.8.4.0+dfsg
+ dpkg-source --after-build 2nd
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
+I: user script /srv/workspace/pbuilder/30641/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/30641/tmp/hooks/B01_cleanup finished
I: unmounting /dev/shm filesystem
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/59688 and its subdirectories
-I: Current time: Wed Feb 7 22:03:41 -12 2018
-I: pbuilder-time-stamp: 1518084221
+I: removing directory /srv/workspace/pbuilder/30641 and its subdirectories
+I: Current time: Fri Jan 6 17:44:03 +14 2017
+I: pbuilder-time-stamp: 1483674243
Compressing the 2nd log...
/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/pymol_1.8.4.0+dfsg-1.diff: 95.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/pymol_1.8.4.0+dfsg-1.diff.gz
b2/build.log: 90.5%
+ echo 'Compressing the 1st log...'
Compressing the 1st log...
+ gzip -9cvn b1/build.log
b1/build.log: 90.5%
+ chmod 644 /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/pymol_1.8.4.0+dfsg-1.build1.log.gz
+ update_rbuildlog
+ chmod 644 /srv/reproducible-results/rbuild-debian-7MFRmNQS/tmp.BRo9n2pWBX
+ mv /srv/reproducible-results/rbuild-debian-7MFRmNQS/tmp.BRo9n2pWBX /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
+ RBUILDLOG=/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
+ '[' 0 -eq 1 ']'
+ '[' 0 -eq 0 ']'
+ filter_changes_files
+ sed -i -e '/^ [a-f0-9]\{32,64\} .*\.buildinfo$/d' b1/pymol_1.8.4.0+dfsg-1_amd64.changes b2/pymol_1.8.4.0+dfsg-1_amd64.changes
+ call_diffoscope_on_changes_files
++ mktemp --tmpdir=/srv/reproducible-results/rbuild-debian-7MFRmNQS
+ local TMPLOG=/srv/reproducible-results/rbuild-debian-7MFRmNQS/tmp.HWaK1G11Rk
+ local TIMEOUT=120m
+ DBDSUITE=unstable
+ '[' unstable = experimental ']'
+ set -x
++ mktemp --tmpdir=/srv/reproducible-results/rbuild-debian-7MFRmNQS -d dbd-tmp-XXXXXXX
+ local TEMP=/srv/reproducible-results/rbuild-debian-7MFRmNQS/dbd-tmp-7Z38k1y
++ schroot --directory /srv/reproducible-results/rbuild-debian-7MFRmNQS -c source:jenkins-reproducible-unstable-diffoscope diffoscope -- --version
+ DIFFOSCOPE='diffoscope 67'
++ echo diffoscope 67
++ grep '^E: 15binfmt: update-binfmts: unable to open'
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ log_info 'diffoscope 67 will be used to compare the two builds:'
+ _log I: 'diffoscope 67 will be used to compare the two builds:'
+ local prefix=I:
+ shift 1
+ tee -a /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
++ date -u
+ echo -e 'Fri Jan 6 03:44:06 UTC 2017 I: diffoscope 67 will be used to compare the two builds:'
Fri Jan 6 03:44:06 UTC 2017 I: diffoscope 67 will be used to compare the two builds:
+ set +e
+ set -x
+ timeout 120m nice schroot --directory /srv/reproducible-results/rbuild-debian-7MFRmNQS -c source:jenkins-reproducible-unstable-diffoscope -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian-7MFRmNQS/dbd-tmp-7Z38k1y ; diffoscope --html /srv/reproducible-results/rbuild-debian-7MFRmNQS/pymol_1.8.4.0+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian-7MFRmNQS/pymol_1.8.4.0+dfsg-1.diffoscope.txt --profile=- /srv/reproducible-results/rbuild-debian-7MFRmNQS/b1/pymol_1.8.4.0+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian-7MFRmNQS/b2/pymol_1.8.4.0+dfsg-1_amd64.changes'
+ RESULT=1
++ grep '^E: 15binfmt: update-binfmts: unable to open' /srv/reproducible-results/rbuild-debian-7MFRmNQS/tmp.HWaK1G11Rk
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ false
+ set +x
Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian-7MFRmNQS/pymol_1.8.4.0+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian-7MFRmNQS/pymol_1.8.4.0+dfsg-1.diffoscope.txt --profile=- /srv/reproducible-results/rbuild-debian-7MFRmNQS/b1/pymol_1.8.4.0+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian-7MFRmNQS/b2/pymol_1.8.4.0+dfsg-1_amd64.changes
============================================================================================================================================================================================================================================================================================================================================================================================================================
close_archive (total time: 0.001s)
----------------------------------
0.000s 16 calls diffoscope.comparators.gzip.GzipContainer
0.000s 14 calls diffoscope.comparators.tar.TarContainer
0.000s 6 calls diffoscope.comparators.deb.DebTarContainer
0.000s 10 calls diffoscope.comparators.deb.DebContainer
0.000s 6 calls diffoscope.comparators.xz.XzContainer
command (total time: 234.161s)
------------------------------
160.519s 901 calls readelf
61.758s 110 calls objdump
4.469s 2 calls objcopy
4.221s 6 calls xz
2.710s 118 calls diff
0.168s 16 calls gzip
0.161s 11 calls pdftk
0.120s 13 calls cmp
0.034s 11 calls pdftotext
0.002s 12 calls cmp (internal)
compare_files (cumulative) (total time: 1245.310s)
--------------------------------------------------
237.151s 1 call abc.DotChangesFile
236.940s 2 calls abc.DebFile
236.223s 2 calls abc.XzFile
233.338s 2 calls abc.DebDataTarFile
230.375s 2 calls abc.ElfFile
62.452s 10 calls diffoscope.comparators.elf.ElfCodeSection
6.639s 34 calls diffoscope.comparators.elf.ElfSection
0.753s 2 calls diffoscope.comparators.elf.ElfStringSection
0.586s 3 calls abc.GzipFile
0.350s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection
0.280s 1 call abc.PdfFile
0.155s 2 calls abc.TarFile
0.040s 1 call abc.TextFile
0.030s 2 calls abc.Md5sumsFile
0.001s 55 calls diffoscope.comparators.utils.libarchive.LibarchiveDirectory
container_extract (total time: 6.001s)
--------------------------------------
4.222s 6 calls diffoscope.comparators.xz.XzContainer
0.862s 8 calls diffoscope.comparators.deb.DebTarContainer
0.728s 24 calls diffoscope.comparators.deb.DebContainer
0.170s 16 calls diffoscope.comparators.gzip.GzipContainer
0.019s 22 calls diffoscope.comparators.tar.TarContainer
has_same_content_as (total time: 3.557s)
----------------------------------------
2.810s 5 calls diffoscope.comparators.utils.archive.ArchiveMember
0.714s 15 calls diffoscope.comparators.utils.libarchive.LibarchiveMember
0.027s 3 calls diffoscope.comparators.debian.DebControlMember
0.002s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink
0.001s 55 calls diffoscope.comparators.utils.libarchive.LibarchiveDirectory
0.001s 34 calls diffoscope.comparators.elf.ElfSection
0.000s 10 calls diffoscope.comparators.elf.ElfCodeSection
0.000s 1 call abc.DotChangesFile
0.000s 2 calls diffoscope.comparators.elf.ElfStringSection
0.000s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection
main (total time: 238.158s)
---------------------------
238.035s 2 calls outputs
0.119s 1 call cleanup
0.004s 1 call parse_args
open_archive (total time: 0.001s)
---------------------------------
0.000s 14 calls diffoscope.comparators.tar.TarContainer
0.000s 16 calls diffoscope.comparators.gzip.GzipContainer
0.000s 10 calls diffoscope.comparators.deb.DebContainer
0.000s 6 calls diffoscope.comparators.deb.DebTarContainer
0.000s 6 calls diffoscope.comparators.xz.XzContainer
output (total time: 0.758s)
---------------------------
0.755s 1 call html
0.003s 1 call text
recognizes (total time: 1.469s)
-------------------------------
0.914s 962 calls diffoscope.comparators.utils.libarchive.LibarchiveMember
0.154s 6 calls abc.DebDataTarFile
0.132s 676 calls diffoscope.comparators.utils.archive.ArchiveMember
0.124s 10 calls abc.DotChangesFile
0.106s 160 calls diffoscope.comparators.debian.DebControlMember
0.014s 612 calls diffoscope.comparators.elf.ElfSection
0.004s 14 calls abc.TarFile
0.004s 180 calls diffoscope.comparators.elf.ElfCodeSection
0.004s 16 calls abc.GzipFile
0.003s 10 calls abc.DebFile
0.002s 8 calls abc.Md5sumsFile
0.002s 8 calls abc.TextFile
0.002s 18 calls diffoscope.comparators.elf.MonkeyPatchedElfSection
0.002s 6 calls abc.ElfFile
0.001s 6 calls abc.XzFile
0.001s 36 calls diffoscope.comparators.elf.ElfStringSection
0.001s 2 calls abc.PdfFile
0.000s 8 calls diffoscope.comparators.binary.FilesystemFile
tee: /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log: No space left on device
Starting cleanup.
/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log:
gzip: /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log.gz: No space left on device
Fri 6 Jan 03:48:06 UTC 2017 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-JLf9yhlK, which will now be removed.
Build step 'Execute shell' marked build as failure
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