[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_arm64_16 #2061

Fri Jan 6 03:58:52 UTC 2017

https://jenkins.debian.net/job/reproducible_builder_arm64_16/2061/------------------------------------------
[...truncated 660.99 KB...]
Setting up libxcb-dri3-0:arm64 (1.12-1) ...
Setting up libk5crypto3:arm64 (1.15-1) ...
Setting up libxcb-glx0:arm64 (1.12-1) ...
Setting up libxcb-randr0:arm64 (1.12-1) ...
Setting up libhdf5-cpp-100:arm64 (1.10.0-patch1+docs-3) ...
Setting up libxcb-xfixes0:arm64 (1.12-1) ...
Setting up libxcb-render0:arm64 (1.12-1) ...
Setting up libnet-smtp-ssl-perl (1.04-1) ...
Setting up libportaudio2:arm64 (19.6.0-1) ...
Setting up libhwloc-dev:arm64 (1.11.5-1) ...
Setting up gettext (0.19.8.1-1) ...
Setting up libblas-dev (3.6.1-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libdrm-dev:arm64 (2.4.74-1) ...
Setting up libgnutls30:arm64 (3.5.7-3) ...
Setting up libx11-6:arm64 (2:1.6.4-2) ...
Setting up libumfpack5:arm64 (1:4.5.4-1) ...
Setting up libhdf5-dev (1.10.0-patch1+docs-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-1) ...
Setting up libxcb-sync1:arm64 (1.12-1) ...
Setting up libsndfile1:arm64 (1.0.27-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up x11proto-xext-dev (7.3.0-1) ...
Setting up libldap-2.4-2:arm64 (2.4.44+dfsg-2) ...
Setting up libxt6:arm64 (1:1.1.5-1) ...
Setting up libxcb-shape0:arm64 (1.12-1) ...
Setting up libxrender1:arm64 (1:0.9.10-1) ...
Setting up libxcb1-dev:arm64 (1.12-1) ...
Setting up libxcb-glx0-dev:arm64 (1.12-1) ...
Setting up libopenmpi2:arm64 (2.0.2~git.20161225-8) ...
Setting up libkrb5-3:arm64 (1.15-1) ...
Setting up texinfo (6.3.0.dfsg.1-1+b1) ...
Setting up libx11-dev:arm64 (2:1.6.4-2) ...
Setting up libxft2:arm64 (2.3.2-1) ...
Setting up libibverbs-dev (1.2.1-2) ...
Setting up libqtdbus4:arm64 (4:4.8.7+dfsg-11) ...
Setting up libxcb-sync-dev:arm64 (1.12-1) ...
Setting up libaudio2:arm64 (1.9.4-5) ...
Setting up fontconfig (2.11.0-6.7) ...
Regenerating fonts cache... done.
Setting up liblapack-dev (3.6.1-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up libx11-xcb-dev:arm64 (2:1.6.4-2) ...
Setting up libmailtools-perl (2.13-1) ...
Setting up libhdf5-openmpi-100:arm64 (1.10.0-patch1+docs-3) ...
Setting up mesa-common-dev:arm64 (13.0.2-3) ...
Setting up libxext6:arm64 (2:1.3.3-1) ...
Setting up libxfixes3:arm64 (1:5.0.3-1) ...
Setting up po-debconf (1.0.20) ...
Setting up libopenmpi-dev (2.0.2~git.20161225-8) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up x11proto-fixes-dev (1:5.0-2) ...
Setting up libgdk-pixbuf2.0-0:arm64 (2.36.2-1) ...
Setting up openmpi-bin (2.0.2~git.20161225-8) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
Setting up libgssapi-krb5-2:arm64 (1.15-1) ...
Setting up libhdf5-openmpi-dev (1.10.0-patch1+docs-3) ...
update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
Setting up libxcb-dri2-0-dev:arm64 (1.12-1) ...
Setting up libxcb-render0-dev:arm64 (1.12-1) ...
Setting up x11proto-damage-dev (1:1.2.1-2) ...
Setting up libxcb-dri3-dev:arm64 (1.12-1) ...
Setting up libxext-dev:arm64 (2:1.3.3-1) ...
Setting up libxcb-shape0-dev:arm64 (1.12-1) ...
Setting up libxxf86vm1:arm64 (1:1.1.4-1) ...
Setting up libxxf86vm-dev:arm64 (1:1.1.4-1) ...
Setting up openssh-client (1:7.3p1-5) ...
Setting up libxfixes-dev:arm64 (1:5.0.3-1) ...
Setting up libwmf0.2-7:arm64 (0.2.8.4-10.6) ...
Setting up libqt4-network:arm64 (4:4.8.7+dfsg-11) ...
Setting up libmime-tools-perl (5.508-1) ...
Setting up mpi-default-bin (1.7) ...
Setting up libmed1v5:arm64 (3.0.6-10.1+b1) ...
Setting up libxinerama1:arm64 (2:1.1.3-1+b1) ...
Setting up libxcb-randr0-dev:arm64 (1.12-1) ...
Setting up libqtgui4:arm64 (4:4.8.7+dfsg-11) ...
Setting up libxdamage1:arm64 (1:1.1.4-2+b1) ...
Setting up libxcb-xfixes0-dev:arm64 (1.12-1) ...
Setting up libcurl3-gnutls:arm64 (7.51.0-1) ...
Setting up libxdamage-dev:arm64 (1:1.1.4-2+b1) ...
Setting up libgraphicsmagick-q16-3 (1.3.25-5) ...
Setting up libgl1-mesa-glx:arm64 (13.0.2-3) ...
Setting up libqscintilla2-12v5 (2.9.3+dfsg-4) ...
Setting up libgl2ps1 (1.3.9-4) ...
Setting up libfltk1.3:arm64 (1.3.3-8+b1) ...
Setting up libglu1-mesa:arm64 (9.0.0-2.1) ...
Setting up libxcb-present-dev:arm64 (1.12-1) ...
Setting up libfltk-images1.3:arm64 (1.3.3-8+b1) ...
Setting up libgraphicsmagick++-q16-12 (1.3.25-5) ...
Setting up libqt4-opengl:arm64 (4:4.8.7+dfsg-11) ...
Setting up libfltk-gl1.3:arm64 (1.3.3-8+b1) ...
Setting up libgl1-mesa-dev:arm64 (13.0.2-3) ...
Setting up liboctave3v5:arm64 (4.0.3-2+b2) ...
Setting up octave (4.0.3-2+b2) ...
Setting up libgmsh2v5:arm64 (2.15.0+dfsg1-1) ...
Setting up gmsh (2.15.0+dfsg1-1) ...
Setting up liboctave-dev (4.0.3-2+b2) ...
Setting up dh-strip-nondeterminism (0.028-1) ...
Setting up debhelper (10.2.2) ...
Setting up dh-autoreconf (12) ...
Setting up octave-pkg-dev (1.4.4) ...
Processing triggers for libc-bin (2.24-8) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
fakeroot is already the newest version (1.21-3).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: Running cd /build/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b --buildinfo-id=arm64 -rfakeroot
dpkg-buildpackage: warning: --buildinfo-id is deprecated, it is without effect
dpkg-buildpackage: info: source package octave-msh
dpkg-buildpackage: info: source version 1.0.10-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Sébastien Villemot <sebastien at debian.org>
 dpkg-source --before-build octave-msh-1.0.10
dpkg-buildpackage: info: host architecture arm64
 fakeroot debian/rules clean
test -x debian/rules
dh_clean 
/usr/bin/make -k -C src clean
make[1]: Entering directory '/build/octave-msh-1.0.10/src'
make[1]: *** No rule to make target 'clean'.
make[1]: Leaving directory '/build/octave-msh-1.0.10/src'
/usr/share/cdbs/1/class/octave-pkg.mk:124: recipe for target 'clean' failed
make: [clean] Error 2 (ignored)
rm -rf inst/aarch64-unknown-linux-gnu-api-v50+ global-list local-list
 debian/rules build
test -x debian/rules
mkdir -p "."
 fakeroot debian/rules binary
test -x debian/rules
dh_testroot
dh_prep 
dh_installdirs -A 
mkdir -p "."
Adding cdbs dependencies to debian/octave-msh.substvars
dh_installdirs -poctave-msh \
	
/usr/share/octave-pkg-dev/check-version
Checking the Octave version... ok
mkdir -p /build/octave-msh-1.0.10/debian/octave-msh/usr/share/octave/packages	\
	 /build/octave-msh-1.0.10/debian/octave-msh/usr/lib/aarch64-linux-gnu/octave/packages
/usr/share/octave-pkg-dev/install-pkg
configure: WARNING: dolfin headers could not be found, som functionalities will be disabled, don't worry your package will still be working, though.
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for mkoctfile... yes
checking how to run the C++ preprocessor... g++ -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dolfin.h usability... no
checking dolfin.h presence... no
checking for dolfin.h... no
configure: creating ./config.status
config.status: creating Makefile
make[1]: Entering directory '/build/octave-msh-1.0.10/src'
/usr/bin/mkoctfile --verbose -Wdate-time -D_FORTIFY_SOURCE=2  mshm_refine.cc -Wl,-z,relro -Wl,--as-needed 
/usr/bin/mkoctfile --verbose -Wdate-time -D_FORTIFY_SOURCE=2  mshm_dolfin_read.cc -Wl,-z,relro -Wl,--as-needed 
/usr/bin/mkoctfile --verbose -Wdate-time -D_FORTIFY_SOURCE=2  mshm_dolfin_write.cc -Wl,-z,relro -Wl,--as-needed 
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2  -fPIC -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time   -D_FORTIFY_SOURCE=2 mshm_dolfin_read.cc -o mshm_dolfin_read.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2  -fPIC -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time   -D_FORTIFY_SOURCE=2 mshm_refine.cc -o mshm_refine.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2  -fPIC -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time   -D_FORTIFY_SOURCE=2 mshm_dolfin_write.cc -o mshm_dolfin_write.o
g++ -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic  -Wdate-time -o mshm_refine.oct  mshm_refine.o   -Wl,-z,relro -Wl,--as-needed -L/usr/lib/aarch64-linux-gnu/octave/4.0.3 -L/usr/lib/aarch64-linux-gnu -loctinterp -loctave -Wl,-z,relro -Wl,--as-needed 
g++ -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic  -Wdate-time -o mshm_dolfin_read.oct  mshm_dolfin_read.o   -Wl,-z,relro -Wl,--as-needed -L/usr/lib/aarch64-linux-gnu/octave/4.0.3 -L/usr/lib/aarch64-linux-gnu -loctinterp -loctave -Wl,-z,relro -Wl,--as-needed 
g++ -I/usr/include/octave-4.0.3/octave/.. -I/usr/include/octave-4.0.3/octave -I/usr/include/hdf5/serial -I/usr/include/mpi -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/octave-msh-1.0.10=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic  -Wdate-time -o mshm_dolfin_write.oct  mshm_dolfin_write.o   -Wl,-z,relro -Wl,--as-needed -L/usr/lib/aarch64-linux-gnu/octave/4.0.3 -L/usr/lib/aarch64-linux-gnu -loctinterp -loctave -Wl,-z,relro -Wl,--as-needed 
make[1]: Leaving directory '/build/octave-msh-1.0.10/src'
copyfile /build/octave-msh-1.0.10/./src/mshm_dolfin_read.oct /build/octave-msh-1.0.10/./src/mshm_dolfin_write.oct /build/octave-msh-1.0.10/./src/mshm_refine.oct /build/octave-msh-1.0.10/./inst/aarch64-unknown-linux-gnu-api-v50+
For information about changes from previous versions of the msh package, run 'news msh'.
( cd  ./debian/octave-msh/usr/share/octave/packages/msh-1.0.10/packinfo ; rm -f COPYING ChangeLog )
/usr/share/octave-pkg-dev/install-docs
/usr/share/octave-pkg-dev/check-pkg
Checking package...
Checking m files ...
[msh3m_submesh]
PASSES 3 out of 3 tests
[msh3m_structured_mesh]
PASSES 5 out of 5 tests
[msh3m_nodes_on_faces]
PASSES 4 out of 4 tests
[msh3m_join_structured_mesh]
PASSES 4 out of 4 tests
[msh3m_geometrical_properties]
PASSES 4 out of 4 tests
[msh2m_topological_properties]
PASSES 3 out of 3 tests
[msh2m_submesh]
PASSES 1 out of 1 test
[msh2m_structured_mesh]
warning: using continuation marker \ outside of double quoted strings is deprecated and will be removed in a future version of Octave
warning: using continuation marker \ outside of double quoted strings is deprecated and will be removed in a future version of Octave
PASSES 1 out of 1 test
[msh2m_nodes_on_sides]
PASSES 1 out of 1 test
[msh2m_join_structured_mesh]
PASSES 1 out of 1 test
[msh2m_gmsh]
Thu Feb  8 10:21:48 UTC 2018 - pbuilder was killed by timeout after 18h.
+ echo 'Compressing the 1st log...'
Compressing the 1st log...
+ gzip -9cvn b1/build.log
b1/build.log:	
gzip: stdout: No space left on device
+ cleanup_all
+ echo 'Starting cleanup.'
Starting cleanup.
+ '[' 0 = 1 ']'
+ '[' '!' -z '' ']'
+ '[' '!' -f /srv/reproducible-results/rbuild-debian-qiKz3WCE/tmp.eeuPQwYTya ']'
+ gzip -9fvn /srv/reproducible-results/rbuild-debian-qiKz3WCE/tmp.eeuPQwYTya
/srv/reproducible-results/rbuild-debian-qiKz3WCE/tmp.eeuPQwYTya:	 87.6% -- replaced with /srv/reproducible-results/rbuild-debian-qiKz3WCE/tmp.eeuPQwYTya.gz
+ '[' master = master ']'
+ gen_package_html octave-msh
+ cd /srv/jenkins/bin
+ python3 -c 'import reproducible_html_packages as rep
pkg = rep.Package('\''octave-msh'\'', no_notes=True)
rep.gen_packages_html([pkg], no_clean=True)'
INFO: Starting at 2017-01-06 03:58:51.901034
INFO: Finished at 2017-01-06 03:58:52.135191, took: 0:00:00.234168
+ cd -
+ cd
+ rm -r /srv/reproducible-results/rbuild-debian-qiKz3WCE
+ echo 'All cleanup done.'
All cleanup done.
Fri  6 Jan 03:58:52 UTC 2017 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-v7FWGVY7, which will now be removed.
Build step 'Execute shell' marked build as failure