[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_amd64_11 #65376

jenkins at jenkins.debian.net jenkins at jenkins.debian.net
Fri Jan 6 04:03:33 UTC 2017


https://jenkins.debian.net/job/reproducible_builder_amd64_11/65376/------------------------------------------
[...truncated 2.29 MB...]
+copying build/lib.linux-x86_64-2.7/chempy/fragments/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fragments
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fast
+copying build/lib.linux-x86_64-2.7/chempy/fast/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/fast
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/amber.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/keyword.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/realtime.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+copying build/lib.linux-x86_64-2.7/chempy/tinker/state.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/tinker
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
+copying build/lib.linux-x86_64-2.7/chempy/mmtf/__init__.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
+copying build/lib.linux-x86_64-2.7/chempy/mmtf/io.py -> /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/chempy/mmtf
 running install_egg_info
-Writing /build/1st/pymol-1.8.4.0+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/pymol-1.8.4.0.egg-info
-creating /build/1st/pymol-1.8.4.0+dfsg/debian/tmp/usr/bin
+Writing /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/lib/python2.7/dist-packages/pymol-1.8.4.0.egg-info
+creating /build/pymol-1.8.4.0+dfsg/2nd/debian/tmp/usr/bin
    debian/rules override_dh_install
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
 pdflatex -output-directory debian -jobname pymol-ref-card debian/pymolRef.tex
 This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2016/Debian) (preloaded format=pdflatex)
  restricted \write18 enabled.
@@ -2991,7 +3008,7 @@
 dh_install data/shaders usr/lib/python2.7/dist-packages/pymol/data/
 rm -rf debian/pymol/usr/lib/python2.7/dist-packages/pymol/data/
 install -m 755 debian/pymol.launch debian/pymol/usr/bin/pymol
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
    dh_installdocs -O--parallel
    dh_installchangelogs -O--parallel
    dh_installexamples -O--parallel
@@ -3005,14 +3022,14 @@
    dh_link -O--parallel
    dh_strip_nondeterminism -O--parallel
    debian/rules override_dh_compress
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
 dh_compress -Xpdb
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
    debian/rules override_dh_fixperms
-make[1]: Entering directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Entering directory '/build/pymol-1.8.4.0+dfsg/2nd'
 dh_fixperms
 find debian/*/usr/share/pymol/data/xray/ -type f -name "*.dat" -exec chmod -x \{\} \;
-make[1]: Leaving directory '/build/1st/pymol-1.8.4.0+dfsg'
+make[1]: Leaving directory '/build/pymol-1.8.4.0+dfsg/2nd'
    dh_strip -O--parallel
    dh_makeshlibs -O--parallel
    dh_shlibdeps -O--parallel
@@ -3026,22 +3043,24 @@
 dpkg-gencontrol: warning: package pymol-data: unused substitution variable ${python:Depends}
    dh_md5sums -O--parallel
    dh_builddeb -O--parallel
-dpkg-deb: building package 'pymol-data' in '../pymol-data_1.8.4.0+dfsg-1_all.deb'.
 dpkg-deb: building package 'pymol-dbgsym' in '../pymol-dbgsym_1.8.4.0+dfsg-1_amd64.deb'.
+dpkg-deb: building package 'pymol-data' in '../pymol-data_1.8.4.0+dfsg-1_all.deb'.
 dpkg-deb: building package 'pymol' in '../pymol_1.8.4.0+dfsg-1_amd64.deb'.
  dpkg-genbuildinfo --build=binary
 dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
  dpkg-genchanges --build=binary >../pymol_1.8.4.0+dfsg-1_amd64.changes
 dpkg-genchanges: info: binary-only upload (no source code included)
- dpkg-source --after-build pymol-1.8.4.0+dfsg
+ dpkg-source --after-build 2nd
 dpkg-buildpackage: info: binary-only upload (no source included)
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/45952/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/45952/tmp/hooks/B01_cleanup finished
 I: unmounting /dev/shm filesystem
 I: unmounting dev/pts filesystem
 I: unmounting run/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/41230 and its subdirectories
-I: Current time: Thu Jan  5 15:53:28 -12 2017
-I: pbuilder-time-stamp: 1483674808
+I: removing directory /srv/workspace/pbuilder/45952 and its subdirectories
+I: Current time: Fri Feb  9 00:22:40 +14 2018
+I: pbuilder-time-stamp: 1518085360

Compressing the 2nd log...
/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/pymol_1.8.4.0+dfsg-1.diff:	 95.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/pymol_1.8.4.0+dfsg-1.diff.gz
b2/build.log:	 90.5%
+ echo 'Compressing the 1st log...'
Compressing the 1st log...
+ gzip -9cvn b1/build.log
b1/build.log:	 90.5%
+ chmod 644 /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/pymol_1.8.4.0+dfsg-1.build1.log.gz
+ update_rbuildlog
+ chmod 644 /srv/reproducible-results/rbuild-debian-4J8K4XyB/tmp.jfku9CSP4i
+ mv /srv/reproducible-results/rbuild-debian-4J8K4XyB/tmp.jfku9CSP4i /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
+ RBUILDLOG=/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
+ '[' 0 -eq 1 ']'
+ '[' 0 -eq 0 ']'
+ filter_changes_files
+ sed -i -e '/^ [a-f0-9]\{32,64\} .*\.buildinfo$/d' b1/pymol_1.8.4.0+dfsg-1_amd64.changes b2/pymol_1.8.4.0+dfsg-1_amd64.changes
+ call_diffoscope_on_changes_files
++ mktemp --tmpdir=/srv/reproducible-results/rbuild-debian-4J8K4XyB
+ local TMPLOG=/srv/reproducible-results/rbuild-debian-4J8K4XyB/tmp.QMW75CoTrF
+ local TIMEOUT=120m
+ DBDSUITE=unstable
+ '[' unstable = experimental ']'
+ set -x
++ mktemp --tmpdir=/srv/reproducible-results/rbuild-debian-4J8K4XyB -d dbd-tmp-XXXXXXX
+ local TEMP=/srv/reproducible-results/rbuild-debian-4J8K4XyB/dbd-tmp-uwwxqxv
++ schroot --directory /srv/reproducible-results/rbuild-debian-4J8K4XyB -c source:jenkins-reproducible-unstable-diffoscope diffoscope -- --version
+ DIFFOSCOPE='diffoscope 67'
++ echo diffoscope 67
++ grep '^E: 15binfmt: update-binfmts: unable to open'
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ log_info 'diffoscope 67 will be used to compare the two builds:'
+ _log I: 'diffoscope 67 will be used to compare the two builds:'
+ local prefix=I:
+ shift 1
+ tee -a /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log
++ date -u
+ echo -e 'Fri Jan  6 03:59:40 UTC 2017  I: diffoscope 67 will be used to compare the two builds:'
Fri Jan  6 03:59:40 UTC 2017  I: diffoscope 67 will be used to compare the two builds:
+ set +e
+ set -x
+ timeout 120m nice schroot --directory /srv/reproducible-results/rbuild-debian-4J8K4XyB -c source:jenkins-reproducible-unstable-diffoscope -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian-4J8K4XyB/dbd-tmp-uwwxqxv ; diffoscope 			--html /srv/reproducible-results/rbuild-debian-4J8K4XyB/pymol_1.8.4.0+dfsg-1.diffoscope.html 			--text /srv/reproducible-results/rbuild-debian-4J8K4XyB/pymol_1.8.4.0+dfsg-1.diffoscope.txt 			--profile=- 			/srv/reproducible-results/rbuild-debian-4J8K4XyB/b1/pymol_1.8.4.0+dfsg-1_amd64.changes 			/srv/reproducible-results/rbuild-debian-4J8K4XyB/b2/pymol_1.8.4.0+dfsg-1_amd64.changes'
+ RESULT=1
++ grep '^E: 15binfmt: update-binfmts: unable to open' /srv/reproducible-results/rbuild-debian-4J8K4XyB/tmp.QMW75CoTrF
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ false
+ set +x
Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian-4J8K4XyB/pymol_1.8.4.0+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian-4J8K4XyB/pymol_1.8.4.0+dfsg-1.diffoscope.txt --profile=- /srv/reproducible-results/rbuild-debian-4J8K4XyB/b1/pymol_1.8.4.0+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian-4J8K4XyB/b2/pymol_1.8.4.0+dfsg-1_amd64.changes
============================================================================================================================================================================================================================================================================================================================================================================================================================

close_archive (total time: 0.001s)
----------------------------------

       0.000s    16 calls    diffoscope.comparators.gzip.GzipContainer
       0.000s    14 calls    diffoscope.comparators.tar.TarContainer
       0.000s    10 calls    diffoscope.comparators.deb.DebContainer
       0.000s     6 calls    diffoscope.comparators.deb.DebTarContainer
       0.000s     6 calls    diffoscope.comparators.xz.XzContainer

command (total time: 230.458s)
------------------------------

     164.845s   901 calls    readelf
      53.817s   110 calls    objdump
       4.435s     2 calls    objcopy
       4.369s     6 calls    xz
       2.439s   118 calls    diff
       0.215s    11 calls    pdftk
       0.159s    16 calls    gzip
       0.122s    13 calls    cmp
       0.055s    11 calls    pdftotext
       0.002s    12 calls    cmp (internal)

compare_files (cumulative) (total time: 1203.178s)
--------------------------------------------------

     230.274s     1 call     abc.DotChangesFile
     230.047s     2 calls    abc.DebFile
     229.381s     2 calls    abc.XzFile
     226.551s     2 calls    abc.DebDataTarFile
     223.662s     2 calls    abc.ElfFile
      54.492s    10 calls    diffoscope.comparators.elf.ElfCodeSection
       6.902s    34 calls    diffoscope.comparators.elf.ElfSection
       0.678s     2 calls    diffoscope.comparators.elf.ElfStringSection
       0.609s     3 calls    abc.GzipFile
       0.342s     1 call     abc.PdfFile
       0.140s     2 calls    abc.TarFile
       0.041s     1 call     abc.TextFile
       0.031s     1 call     diffoscope.comparators.elf.MonkeyPatchedElfSection
       0.026s     2 calls    abc.Md5sumsFile
       0.001s    55 calls    diffoscope.comparators.utils.libarchive.LibarchiveDirectory

container_extract (total time: 6.108s)
--------------------------------------

       4.370s     6 calls    diffoscope.comparators.xz.XzContainer
       0.893s     8 calls    diffoscope.comparators.deb.DebTarContainer
       0.665s    24 calls    diffoscope.comparators.deb.DebContainer
       0.161s    16 calls    diffoscope.comparators.gzip.GzipContainer
       0.018s    22 calls    diffoscope.comparators.tar.TarContainer

has_same_content_as (total time: 3.698s)
----------------------------------------

       2.894s     5 calls    diffoscope.comparators.utils.archive.ArchiveMember
       0.765s    15 calls    diffoscope.comparators.utils.libarchive.LibarchiveMember
       0.035s     3 calls    diffoscope.comparators.debian.DebControlMember
       0.001s     1 call     diffoscope.comparators.utils.libarchive.LibarchiveSymlink
       0.001s    55 calls    diffoscope.comparators.utils.libarchive.LibarchiveDirectory
       0.001s    34 calls    diffoscope.comparators.elf.ElfSection
       0.000s    10 calls    diffoscope.comparators.elf.ElfCodeSection
       0.000s     1 call     abc.DotChangesFile
       0.000s     2 calls    diffoscope.comparators.elf.ElfStringSection
       0.000s     1 call     diffoscope.comparators.elf.MonkeyPatchedElfSection

main (total time: 231.456s)
---------------------------

     231.277s     2 calls    outputs
       0.176s     1 call     cleanup
       0.003s     1 call     parse_args

open_archive (total time: 0.001s)
---------------------------------

       0.000s    14 calls    diffoscope.comparators.tar.TarContainer
       0.000s    16 calls    diffoscope.comparators.gzip.GzipContainer
       0.000s    10 calls    diffoscope.comparators.deb.DebContainer
       0.000s     6 calls    diffoscope.comparators.deb.DebTarContainer
       0.000s     6 calls    diffoscope.comparators.xz.XzContainer

output (total time: 0.850s)
---------------------------

       0.847s     1 call     html
       0.003s     1 call     text

recognizes (total time: 1.312s)
-------------------------------

       0.877s   962 calls    diffoscope.comparators.utils.libarchive.LibarchiveMember
       0.152s    10 calls    abc.DotChangesFile
       0.133s   676 calls    diffoscope.comparators.utils.archive.ArchiveMember
       0.108s   160 calls    diffoscope.comparators.debian.DebControlMember
       0.015s   612 calls    diffoscope.comparators.elf.ElfSection
       0.004s   180 calls    diffoscope.comparators.elf.ElfCodeSection
       0.004s    14 calls    abc.TarFile
       0.003s    16 calls    abc.GzipFile
       0.003s    10 calls    abc.DebFile
       0.002s     6 calls    abc.XzFile
       0.002s    18 calls    diffoscope.comparators.elf.MonkeyPatchedElfSection
       0.002s     8 calls    abc.TextFile
       0.002s     6 calls    abc.ElfFile
       0.002s     8 calls    abc.Md5sumsFile
       0.002s     6 calls    abc.DebDataTarFile
       0.001s    36 calls    diffoscope.comparators.elf.ElfStringSection
       0.001s     2 calls    abc.PdfFile
       0.000s     8 calls    diffoscope.comparators.binary.FilesystemFile
tee: /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log: No space left on device
Starting cleanup.
/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log:	
gzip: /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/pymol_1.8.4.0+dfsg-1.rbuild.log.gz: No space left on device
Fri  6 Jan 04:03:32 UTC 2017 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-7RLNCXu2, which will now be removed.
Build step 'Execute shell' marked build as failure



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