[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_armhf_54 #9124
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Wed Feb 1 17:52:31 UTC 2017
https://jenkins.debian.net/job/reproducible_builder_armhf_54/9124/------------------------------------------
[...truncated 1.79 MB...]
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target CompNovo
/usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend.internal".
Scanning dependencies of target ConsensusMapNormalizer
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /build/1st/openms-2.0.0/src/topp/ConsensusMapNormalizer.cpp
[ 92%] Linking CXX executable ../../bin/ConsensusMapNormalizer
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target ConsensusMapNormalizer
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend.internal".
Scanning dependencies of target FeatureFinderCentroided
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /build/1st/openms-2.0.0/src/topp/FeatureFinderCentroided.cpp
[ 92%] Linking CXX executable ../../bin/FeatureFinderCentroided
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target FeatureFinderCentroided
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend.internal".
Scanning dependencies of target FeatureFinderMultiplex
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /build/1st/openms-2.0.0/src/topp/FeatureFinderMultiplex.cpp
[ 92%] Linking CXX executable ../../bin/FeatureFinderMultiplex
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target FeatureFinderMultiplex
/usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FileFilter.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FileFilter.dir/depend.internal".
Scanning dependencies of target FileFilter
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /build/1st/openms-2.0.0/src/topp/FileFilter.cpp
[ 92%] Linking CXX executable ../../bin/FileFilter
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target FileFilter
/usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend.internal".
Scanning dependencies of target SpectraFilterNLargest
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /build/1st/openms-2.0.0/src/topp/SpectraFilterNLargest.cpp
[ 92%] Linking CXX executable ../../bin/SpectraFilterNLargest
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target SpectraFilterNLargest
/usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CompNovoCID.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CompNovoCID.dir/depend.internal".
Scanning dependencies of target CompNovoCID
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /build/1st/openms-2.0.0/src/topp/CompNovoCID.cpp
[ 92%] Linking CXX executable ../../bin/CompNovoCID
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target CompNovoCID
/usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend.internal".
Scanning dependencies of target SpectraFilterParentPeakMower
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /build/1st/openms-2.0.0/src/topp/SpectraFilterParentPeakMower.cpp
[ 92%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target SpectraFilterParentPeakMower
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend.internal".
Scanning dependencies of target FeatureFinderIdentification
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /build/1st/openms-2.0.0/src/topp/FeatureFinderIdentification.cpp
[ 92%] Linking CXX executable ../../bin/FeatureFinderIdentification
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target FeatureFinderIdentification
/usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MzTabExporter.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MzTabExporter.dir/depend.internal".
Scanning dependencies of target MzTabExporter
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /build/1st/openms-2.0.0/src/topp/MzTabExporter.cpp
[ 92%] Linking CXX executable ../../bin/MzTabExporter
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target MzTabExporter
/usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MRMMapper.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MRMMapper.dir/depend.internal".
Scanning dependencies of target MRMMapper
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /build/1st/openms-2.0.0/src/topp/MRMMapper.cpp
[ 92%] Linking CXX executable ../../bin/MRMMapper
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target MRMMapper
/usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend.internal".
Scanning dependencies of target InclusionExclusionListCreator
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /build/1st/openms-2.0.0/src/topp/InclusionExclusionListCreator.cpp
[ 92%] Linking CXX executable ../../bin/InclusionExclusionListCreator
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target InclusionExclusionListCreator
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend.internal".
Scanning dependencies of target FeatureFinderMetabo
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /build/1st/openms-2.0.0/src/topp/FeatureFinderMetabo.cpp
[ 92%] Linking CXX executable ../../bin/FeatureFinderMetabo
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target FeatureFinderMetabo
/usr/bin/make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InspectAdapter.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/InspectAdapter.dir/depend.internal".
Scanning dependencies of target InspectAdapter
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -c /build/1st/openms-2.0.0/src/topp/InspectAdapter.cpp
[ 92%] Linking CXX executable ../../bin/InspectAdapter
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InspectAdapter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -o ../../bin/InspectAdapter -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target InspectAdapter
/usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/depend.internal".
Scanning dependencies of target MascotAdapterOnline
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /build/1st/openms-2.0.0/src/topp/MascotAdapterOnline.cpp
[ 92%] Linking CXX executable ../../bin/MascotAdapterOnline
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline -rdynamic ../../lib/libOpenMS.so.2.0.0 ../../lib/libOpenSwathAlgo.so.2.0.0 -lQtNetwork -lQtCore -lsvm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lWm5Core -lWm5Mathematics -lbz2 -lz -lglpk
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Built target MascotAdapterOnline
/usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
cd /build/1st/openms-2.0.0/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/1st/openms-2.0.0 /build/1st/openms-2.0.0/src/topp /build/1st/openms-2.0.0/debian/build /build/1st/openms-2.0.0/debian/build/src/topp /build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake --color=
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend.internal".
Dependee "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/1st/openms-2.0.0/debian/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend.internal".
Scanning dependencies of target MapAlignerSpectrum
make[4]: Leaving directory '/build/1st/openms-2.0.0/debian/build'
/usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build
make[4]: Entering directory '/build/1st/openms-2.0.0/debian/build'
[ 92%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o
cd /build/1st/openms-2.0.0/debian/build/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -isystem /build/1st/openms-2.0.0/src/openms/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms/include -isystem /usr/include/qt4/QtDesigner -isystem /usr/include/qt4/QtDeclarative -isystem /usr/include/qt4/QtScriptTools -isystem /usr/include/qt4/QtDBus -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtXmlPatterns -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtHelp -isystem /usr/include/qt4/QtUiTools -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtScript -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/Qt3Support -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -isystem /usr/share/qt4/mkspecs/default -isystem /usr/include/qt4 -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/1st/openms-2.0.0/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/debian/build/src/openswathalgo/include -isystem /build/1st/openms-2.0.0/src/openms_gui/include -isystem /build/1st/openms-2.0.0/debian/build/src/openms_gui/include -g -O2 -fdebug-prefix-map=/build/1st/openms-2.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wall -Wextra -fvisibility=hidden -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unknown-pragmas -Wno-unused-function -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /build/1st/openms-2.0.0/src/topp/MapAlignerSpectrum.cpp
Starting cleanup.
FATAL: null
java.lang.NullPointerException
at hudson.plugins.build_timeout.BuildTimeoutWrapper$EnvironmentImpl.tearDown(BuildTimeoutWrapper.java:199)
at hudson.model.Build$BuildExecution.doRun(Build.java:173)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
at hudson.model.Run.execute(Run.java:1728)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:98)
at hudson.model.Executor.run(Executor.java:404)
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