[Qa-jenkins-scm] Build failed in Jenkins: reproducible_scheduler #36226

[jenkins at jenkins.debian.net]

See <https://jenkins.debian.net/job/reproducible_scheduler/36226/display/redirect>

Changes:


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Started by timer
Running as SYSTEM
[EnvInject] - Loading node environment variables.
Building on the built-in node in workspace <https://jenkins.debian.net/job/reproducible_scheduler/ws/>
[workspace] $ /bin/sh -xe /tmp/jenkins18032141269510650881.sh
+ /srv/jenkins/bin/reproducible_scheduler.py
/srv/jenkins/bin/reproducible_scheduler.py:15: DeprecationWarning: please use 'debian.deb822' instead
  import deb822
[2022-07-24 14:23:00] INFO: Starting at 2022-07-24 14:23:00.386558
[2022-07-24 14:23:00] INFO: Updating sources tables for all suites.
[2022-07-24 14:23:00] INFO: Downloading sources file for stretch: http://deb.debian.org/debian/dists/stretch/main/source/Sources.xz
[2022-07-24 14:23:03] INFO: Updating sources db for stretch/amd64...
/usr/lib/python3/dist-packages/debian/deb822.py:748: UserWarning: Parsing of Deb822 data with python-apt's apt_pkg was requested but this cannot be done on non-file input.
  warnings.warn(msg)
[2022-07-24 14:23:22] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:23:34] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:23:35] INFO: DB update done for stretch/amd64 done at 2022-07-24 14:23:35.
[2022-07-24 14:23:35] INFO: Updating sources db for stretch/i386...
[2022-07-24 14:23:52] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:24:05] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:24:05] INFO: DB update done for stretch/i386 done at 2022-07-24 14:24:05.
[2022-07-24 14:24:05] INFO: Updating sources db for stretch/arm64...
[2022-07-24 14:24:25] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:24:40] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:24:40] INFO: DB update done for stretch/arm64 done at 2022-07-24 14:24:40.
[2022-07-24 14:24:40] INFO: Updating sources db for stretch/armhf...
[2022-07-24 14:24:57] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:25:10] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:25:10] INFO: DB update done for stretch/armhf done at 2022-07-24 14:25:10.
[2022-07-24 14:25:10] INFO: Sources for suite stretch done at 2022-07-24 14:25:10.
[2022-07-24 14:25:10] INFO: Downloading sources file for buster: http://deb.debian.org/debian/dists/buster/main/source/Sources.xz
[2022-07-24 14:25:14] INFO: Updating sources db for buster/amd64...
[2022-07-24 14:25:36] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:25:54] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:25:54] INFO: DB update done for buster/amd64 done at 2022-07-24 14:25:54.
[2022-07-24 14:25:54] INFO: Updating sources db for buster/i386...
[2022-07-24 14:26:14] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:26:31] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:26:31] INFO: DB update done for buster/i386 done at 2022-07-24 14:26:31.
[2022-07-24 14:26:31] INFO: Updating sources db for buster/arm64...
[2022-07-24 14:26:51] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:27:12] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:27:12] INFO: DB update done for buster/arm64 done at 2022-07-24 14:27:12.
[2022-07-24 14:27:12] INFO: Updating sources db for buster/armhf...
[2022-07-24 14:27:32] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:27:51] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:27:51] INFO: DB update done for buster/armhf done at 2022-07-24 14:27:51.
[2022-07-24 14:27:51] INFO: Sources for suite buster done at 2022-07-24 14:27:51.
[2022-07-24 14:27:51] INFO: Downloading sources file for bullseye: http://deb.debian.org/debian/dists/bullseye/main/source/Sources.xz
[2022-07-24 14:27:52] INFO: Updating sources db for bullseye/amd64...
[2022-07-24 14:28:13] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:28:35] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:28:35] INFO: DB update done for bullseye/amd64 done at 2022-07-24 14:28:35.
[2022-07-24 14:28:35] INFO: Updating sources db for bullseye/i386...
[2022-07-24 14:28:57] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:29:19] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:29:19] INFO: DB update done for bullseye/i386 done at 2022-07-24 14:29:19.
[2022-07-24 14:29:19] INFO: Updating sources db for bullseye/arm64...
[2022-07-24 14:29:43] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:30:06] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:30:06] INFO: DB update done for bullseye/arm64 done at 2022-07-24 14:30:06.
[2022-07-24 14:30:06] INFO: Updating sources db for bullseye/armhf...
[2022-07-24 14:30:29] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:30:51] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:30:51] INFO: DB update done for bullseye/armhf done at 2022-07-24 14:30:51.
[2022-07-24 14:30:51] INFO: Sources for suite bullseye done at 2022-07-24 14:30:51.
[2022-07-24 14:30:51] INFO: Downloading sources file for bookworm: http://deb.debian.org/debian/dists/bookworm/main/source/Sources.xz
[2022-07-24 14:30:53] INFO: Updating sources db for bookworm/amd64...
[2022-07-24 14:31:17] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:31:43] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:31:43] INFO: DB update done for bookworm/amd64 done at 2022-07-24 14:31:43.
[2022-07-24 14:31:43] INFO: Updating sources db for bookworm/i386...
[2022-07-24 14:32:06] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:32:32] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:32:32] INFO: DB update done for bookworm/i386 done at 2022-07-24 14:32:32.
[2022-07-24 14:32:32] INFO: Updating sources db for bookworm/arm64...
[2022-07-24 14:32:55] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:33:22] INFO: Now deleting 0 removed packages: []
[2022-07-24 14:33:22] INFO: DB update done for bookworm/arm64 done at 2022-07-24 14:33:22.
[2022-07-24 14:33:22] INFO: Updating sources db for bookworm/armhf...
[2022-07-24 14:33:44] INFO: Pushing 0 updated packages to the database...
[2022-07-24 14:34:09] INFO: Now deleting 6 removed packages: ['heudiconv', 'python-prov', 'nipype', 'python-pyrdfa', 'snakemake', 'ayatana-indicator-datetime']
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1256, in _execute_context
    self.dialect.do_executemany(
  File "/usr/lib/python3/dist-packages/sqlalchemy/dialects/postgresql/psycopg2.py", line 898, in do_executemany
    cursor.executemany(statement, parameters)
psycopg2.errors.UniqueViolation: duplicate key value violates unique constraint "removed_packages_pkey"
DETAIL:  Key (name, suite, architecture)=(python-pyrdfa, bookworm, armhf) already exists.


The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/srv/jenkins/bin/reproducible_scheduler.py", line 798, in <module>
    update_sources(suite)
  File "/srv/jenkins/bin/reproducible_scheduler.py", line 304, in update_sources
    update_sources_db(suite, arch, sources)
  File "/srv/jenkins/bin/reproducible_scheduler.py", line 425, in update_sources_db
    conn_db.execute(removed_packages_table.insert(), pkgs_to_rm)
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1011, in execute
    return meth(self, multiparams, params)
  File "/usr/lib/python3/dist-packages/sqlalchemy/sql/elements.py", line 298, in _execute_on_connection
    return connection._execute_clauseelement(self, multiparams, params)
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1124, in _execute_clauseelement
    ret = self._execute_context(
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1316, in _execute_context
    self._handle_dbapi_exception(
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1510, in _handle_dbapi_exception
    util.raise_(
  File "/usr/lib/python3/dist-packages/sqlalchemy/util/compat.py", line 182, in raise_
    raise exception
  File "/usr/lib/python3/dist-packages/sqlalchemy/engine/base.py", line 1256, in _execute_context
    self.dialect.do_executemany(
  File "/usr/lib/python3/dist-packages/sqlalchemy/dialects/postgresql/psycopg2.py", line 898, in do_executemany
    cursor.executemany(statement, parameters)
sqlalchemy.exc.IntegrityError: (psycopg2.errors.UniqueViolation) duplicate key value violates unique constraint "removed_packages_pkey"
DETAIL:  Key (name, suite, architecture)=(python-pyrdfa, bookworm, armhf) already exists.

[SQL: INSERT INTO removed_packages (name, suite, architecture) VALUES (%(name)s, %(suite)s, %(architecture)s)]
[parameters: ({'name': 'heudiconv', 'suite': 'bookworm', 'architecture': 'armhf'}, {'name': 'python-prov', 'suite': 'bookworm', 'architecture': 'armhf'}, {'name': 'nipype', 'suite': 'bookworm', 'architecture': 'armhf'}, {'name': 'python-pyrdfa', 'suite': 'bookworm', 'architecture': 'armhf'}, {'name': 'snakemake', 'suite': 'bookworm', 'architecture': 'armhf'}, {'name': 'ayatana-indicator-datetime', 'suite': 'bookworm', 'architecture': 'armhf'})]
(Background on this error at: http://sqlalche.me/e/13/gkpj)
[2022-07-24 14:34:09] INFO: Finished at 2022-07-24 14:34:09.414706, took: 0:11:09.028156
Build step 'Execute shell' marked build as failure