[R-pkg-team] Bug#955640: r-cran-uwot: autopkgtest regression: Index size is not a multiple of vector size

Paul Gevers elbrus at debian.org
Fri Apr 3 20:39:43 BST 2020


Source: r-cran-uwot
Version: 0.1.8-1
X-Debbugs-CC: debian-ci at lists.debian.org
Severity: serious
User: debian-ci at lists.debian.org
Usertags: regression

Dear maintainer(s),

With a recent upload of r-cran-uwot the autopkgtest of r-cran-uwot fails
in testing when that autopkgtest is run with the binary packages of
r-cran-uwot from unstable. It passes when run with only packages from
testing. In tabular form:

                       pass            fail
r-cran-uwot            from testing    0.1.8-1
all others             from testing    from testing

I copied some of the output at the bottom of this report.

Currently this regression is blocking the migration to testing [1]. Can
you please investigate the situation and fix it?

More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=r-cran-uwot

https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-cran-uwot/4784519/log.gz
autopkgtest [23:18:13]: test run-unit-test: [-----------------------
BEGIN TEST testthat.R

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> library(testthat)
> library(uwot)
Loading required package: Matrix
>
> test_check("uwot")
Index size is not a multiple of vector size: No such file or directory (2)
── 1. Error: (unknown) (@test_output.R#232)
───────────────────────────────────
search_k/n_trees settings were unable to find 4 neighbors for all items.
Backtrace:
 1. uwot::umap(...)
 2. uwot:::uwot(...)
 3. uwot:::data2set(...)
 4. uwot:::x2set(...)
 5. uwot:::x2nn(...)
 6. uwot:::find_nn(...)
 7. uwot:::annoy_nn(...)
 8. uwot:::annoy_search(...)
 9. uwot:::annoy_search_parallel(...)

══ testthat results
═══════════════════════════════════════════════════════════
[ OK: 414 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
1. Error: (unknown) (@test_output.R#232)

Error: testthat unit tests failed
Execution halted
autopkgtest [23:18:44]: test run-unit-test: -----------------------]


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