[R-pkg-team] Bug#956246: ITP: r-bioc-tcgabiolinks -- GNU R/Bioconductor package for integrative analysis with GDC data

Andreas Tille tille at debian.org
Wed Apr 8 21:17:58 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: r-bioc-tcgabiolinks -- GNU R/Bioconductor package for integrative analysis with GDC data
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : r-bioc-tcgabiolinks
  Version         : 2.14.1
  Upstream Author : Antonio Colaprico,
* URL             : https://bioconductor.org/packages/TCGAbiolinks/
* License         : GPL-3+
  Programming Lang: GNU R
  Description     : GNU R/Bioconductor package for integrative analysis with GDC data
 The aim of TCGAbiolinks is:
  1) facilitate the GDC open-access data retrieval,
  2) prepare the data using the appropriate pre-processing strategies,
  3) provide the means to carry out different standard analyses and
  4) to easily reproduce earlier research results.
 In more detail, the package provides multiple methods for analysis (e.g.,
 differential expression analysis, identifying differentially methylated
 regions) and methods for visualization (e.g., survival plots, volcano plots,
 starburst plots) in order to easily develop complete analysis pipelines.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-bioc-tcgabiolinks



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