[R-pkg-team] Bug#972392: ITP: r-cran-bios2cor -- GNU R from Biological Sequences and Simulations to Correlation

[Shayan Doust]

Package: wnpp
Severity: wishlist

Subject: ITP: r-cran-bios2cor -- GNU R from Biological Sequences and Simulations to Correlation
Package: wnpp
Owner: Shayan Doust <hello at shayandoust.me>
Severity: wishlist

* Package name    : r-cran-bios2cor
  Version         : 2.2
  Upstream Author : Bruck Taddese,
* URL             : https://cran.r-project.org/package=Bios2cor
* License         : GPL-2+
  Programming Lang: GNU R
  Description     : GNU R from Biological Sequences and Simulations to Correlation
       Analysis Utilities for computation and analysis of
       correlation/covariation in multiple sequence alignments and in
       side chain motions during molecular dynamics simulations. Features
       include the computation of correlation/covariation scores using a
       variety of scoring functions between either sequence positions in
       alignments or side chain dihedral angles in molecular dynamics
       simulations and utilities to analyze the correlation/covariation
       matrix through a variety of tools including network representation
       and principal components analysis. In addition, several utility
       functions are based on the R graphical environment to provide
       friendly tools for help in data interpretation. Examples of
       sequence covariation analysis are provided in: (1) Pele J, Moreau
       M, Abdi H, Rodien P, Castel H, Chabbert M (2014)
       <doi:10.1002/prot.24570> and (2) Taddese B, Deniaud M, Garnier A,
       Tiss A, Guissouma H, Abdi H, Henrion D, Chabbert M (2018) <doi:
       10.1371/journal.pcbi.1006209>. An example of side chain correlated
       motion analysis is provided in: Taddese B, Garnier A, Abdi H,
       Henrion D, Chabbert M (2020) <doi: 10.1038/s41598-020-72766-
       1>. This work was supported by the French National Research
         Agency (Grant number: ANR-11-BSV2-026) and by GENCI (Grant
         number: 100567).

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-cran-bios2cor