[R-pkg-team] Bug#970255: ITP: r-cran-immunarch -- Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires
Steffen Moeller
moeller at debian.org
Sun Sep 13 21:49:21 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-immunarch -- Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist
* Package name : r-cran-immunarch
Version : 0.6.5
Upstream Author : Vadim I. Nazarov
* URL : https://cran.r-project.org/package=immunarch
* License : AGPL-3
Programming Lang: GNU R
Description : Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires
A comprehensive framework for bioinformatics exploratory analysis of
bulk and single-cell T-cell receptor and antibody repertoires. It
provides seamless data loading, analysis and visualisation for AIRR
(Adaptive Immune Receptor Repertoire) data, both bulk immunosequencing
(RepSeq) and single-cell sequencing (scRNAseq). It implements most of
the widely used AIRR analysis methods, such as: clonality analysis,
estimation of repertoire similarities in distribution of clonotypes
and gene segments, repertoire diversity analysis, annotation of
clonotypes using external immune receptor databases and clonotype
tracking in vaccination and cancer studies. A successor to our
previously published 'tcR' immunoinformatics package.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-cran-immunarch
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