[R-pkg-team] Bug#982111: [bunk at debian.org: Bug#982111: r-cran-rcdk: autopkgtest failure]

Andreas Tille andreas at fam-tille.de
Sun Feb 7 11:42:39 GMT 2021


Control: tags -1 help

Hi Pierre,

do you have some idea how to fix this?

Kind regards

----- Forwarded message from Adrian Bunk <bunk at debian.org> -----

Date: Sat, 06 Feb 2021 17:55:20 +0200
From: Adrian Bunk <bunk at debian.org>
To: Debian Bug Tracking System <submit at bugs.debian.org>
Subject: Bug#982111: r-cran-rcdk: autopkgtest failure
X-Debian-PR-Message: report 982111
X-Debian-PR-Package: src:r-cran-rcdk
X-Debian-PR-Keywords: 
X-Debian-PR-Source: r-cran-rcdk

Source: r-cran-rcdk
Version: 3.5.0+dfsg-2
Severity: serious

https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-cran-rcdk/10267024/log.gz

...
autopkgtest [17:35:11]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
autopkgtest [17:35:11]: test pkg-r-autopkgtest: [-----------------------
Test: Try to load the R library rcdk

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> library('rcdk')
Loading required package: rcdklibs
Loading required package: rJava
Error: package or namespace load failed for ‘rcdk’:
 .onLoad failed in loadNamespace() for 'rcdk', details:
  call: .jnew("org/openscience/cdk/formula/rules/NitrogenRule")
  error: java.lang.ClassNotFoundException
Execution halted
autopkgtest [17:35:14]: test pkg-r-autopkgtest: -----------------------]
autopkgtest [17:35:14]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
pkg-r-autopkgtest    FAIL non-zero exit status 1
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