[R-pkg-team] Bug#994443: Bug#994443: Bug#994443: marked as done (r-bioc-deseq2: autopkgtest regression)

Nilesh Patra nilesh at nileshpatra.info
Thu Nov 4 11:55:21 GMT 2021


control: reassign -1 dh-r
control: severity -1 important
control: retitle -1 pkg-r-autopkgtest: please use the same number of packages as release, and not base it on apt lists

Hi Graham,

On Wed, 3 Nov 2021 10:52:04 +0200 Graham Inggs <ginggs at debian.org> wrote:> On Fri, 29 Oct 2021 at 21:15, Nilesh Patra <nilesh at nileshpatra.info> wrote:
> > I think this has got nothing to do with our changes in unstable -- I'd be very surprised if so,
> > since essentially atleast stable is disconnected, unless some other package has been on-purpose updated there.
> 
> What changed in unstable, was that r-bioc-tximportdata was accepted on
> 2021-09-10, causing r-bioc-deseq2's autopkgtests to fail in testing
> and stable.
> 
> > As I can see, tests in stable were always failing[1]
> 
> They were passing in testing up until 2021-09-07, so they would have
> been passing in stable on the day of the bullseye release.
> 
> Removing r-bioc-deseq2 from testing will not solve this bug.
> Reassigning this bug to r-bioc-tximportdata and removing
> r-bioc-tximportdata from testing will not help either, as only
> removing r-bioc-tximportdata from unstable will make r-bioc-deseq2's
> autopkgtests pass again.  I suggest reassigning this bug to dh-r,
> where this behaviour in pkg-r-autopkgtest can at least be disabled for
> now, until a proper solution for #961138 can be found.

Done.

Thanks, Nilesh
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