[R-pkg-team] Bug#1017626: r-cran-glmmtmb: autopkgtest regression on i386: times out

Paul Gevers elbrus at debian.org
Thu Aug 18 17:17:04 BST 2022


Source: r-cran-glmmtmb
Version: 1.1.4+dfsg-1
Severity: serious
User: debian-ci at lists.debian.org
Usertags: timeout

Dear maintainer(s),

I looked at the results of the autopkgtest of your package because it 
was showing up on our page for long running tests on i386. I noticed 
that your package regressed on armhf around Mid July 2022, as it started 
to time out on the run-unit-test test after 2:47 hours while it passed 
in several minutes before.

Don't hesitate to reach out if you need help and some more information
from our infrastructure.

Paul

https://ci.debian.net/packages/r/r-cran-glmmtmb/testing/i386/

https://ci.debian.net/data/autopkgtest/testing/i386/r/r-cran-glmmtmb/24014022/log.gz

methods: 
............................S....................................................
simulate consistency with glm/lm: ...
Ranef etc.: .......S...........
misc: .
offset: SSSSSSSSS
predict: .....SSS
Predict two-column response case: SS.................S..SSSS..S...S......
reml:
REML: ...autopkgtest [21:13:54]: ERROR: timed out on command "su -s 
/bin/bash debci -c set -e; export USER=`id -nu`; . /etc/profile 
 >/dev/null 2>&1 || true;  . ~/.profile >/dev/null 2>&1 || true; 
buildtree="/tmp/autopkgtest-lxc.gn26h5iq/downtmp/build.QTo/src"; mkdir 
-p -m 1777 -- 
"/tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-artifacts"; export 
AUTOPKGTEST_ARTIFACTS="/tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-artifacts"; 
export ADT_ARTIFACTS="$AUTOPKGTEST_ARTIFACTS"; mkdir -p -m 755 
"/tmp/autopkgtest-lxc.gn26h5iq/downtmp/autopkgtest_tmp"; export 
AUTOPKGTEST_TMP="/tmp/autopkgtest-lxc.gn26h5iq/downtmp/autopkgtest_tmp"; 
export ADTTMP="$AUTOPKGTEST_TMP"; export DEBIAN_FRONTEND=noninteractive; 
export LANG=C.UTF-8; export DEB_BUILD_OPTIONS=parallel=2; unset LANGUAGE 
LC_CTYPE LC_NUMERIC LC_TIME LC_COLLATE   LC_MONETARY LC_MESSAGES 
LC_PAPER LC_NAME LC_ADDRESS   LC_TELEPHONE LC_MEASUREMENT 
LC_IDENTIFICATION LC_ALL;rm -f /tmp/autopkgtest_script_pid; set -C; echo 
$$ > /tmp/autopkgtest_script_pid; set +C; trap "rm -f 
/tmp/autopkgtest_script_pid" EXIT INT QUIT PIPE; cd "$buildtree"; chmod 
+x 
/tmp/autopkgtest-lxc.gn26h5iq/downtmp/build.QTo/src/debian/tests/run-unit-test; 
touch /tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-stdout 
/tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-stderr; 
/tmp/autopkgtest-lxc.gn26h5iq/downtmp/build.QTo/src/debian/tests/run-unit-test 
2> >(tee -a /tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-stderr 
 >&2) > >(tee -a 
/tmp/autopkgtest-lxc.gn26h5iq/downtmp/run-unit-test-stdout);" (kind: test)
autopkgtest [21:13:54]: test run-unit-test: -----------------------]
run-unit-test        FAIL timed out
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