[R-pkg-team] Bug#1005503: [Help] Re: Bug#1005503: cdkr: FTBFS: [javac] /<<PKGBUILDDIR>>/rcdkjar/src/org/guha/rcdk/util/Misc.java:14: error: package org.openscience.cdk.inchi does not exist

[Andrius Merkys]

Control: tags -1 - help
Control: owner -1 !

Hi Andreas,

On 2022-02-13 20:14, Andreas Tille wrote:
> I noticed that a new version (2.7.1) of cdk was uploaded which is
> possibly responsible for the issue reported below.  Before I'll contact
> cdkr authors I want to make sure that its not a Debian packaging issue
> which is causing the problem below.

Thanks for pinging me here. This issue is indeed Debian-specific, so the
upstreams should not be bothered by it.

In the upload of cdk 1:2.7.1-1 I have disabled InChI support once again
due to cdk requirement of DFSG-incompatible version of InChI reference
library. Thus cdkr is not able to find the related cdk classes no more.

The only viable solution in cdkr is disabling InChI support too, most
likely by patching out the related classes. I will give it a look either
before or during Debian Med Sprint.

Best,
Andrius