[R-pkg-team] Bug#1008221: ITP: r-bioc-tmixclust -- mixed-effects gene-expression time-series analysis

Steffen Moeller moeller at debian.org
Thu Mar 24 15:10:29 GMT 2022


Package: wnpp
Severity: wishlist

Subject: ITP: r-bioc-tmixclust -- mixed-effects gene-expression time-series analysis
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist

* Package name    : r-bioc-tmixclust
  Version         : 1.16.0
  Upstream Author : Monica Golumbeanu <golumbeanu.monica at gmail.com>
* URL             : https://bioconductor.org/packages/TMixClust/
* License         : GPL-2+
  Programming Lang: GNU R
  Description     : mixed-effects gene-expression time-series analysis
 To investigate how a drug effects a tissue sample over time,
 one commonly determines the transcriptomes at different time points
 to distinguish genes that react early from those that react late,
 which are steadily going up or down, which are oscillating, and
 what molecular process are those subsets of genes contributing to.
 .
 Time Series Clustering of Gene Expression with Gaussian
 Mixed-Effects Models and Smoothing Splines Implementation of a
 clustering method for time series gene expression data based on
 mixed-effects models with Gaussian variables and non-parametric
 cubic splines estimation. The method can robustly account for the
 high levels of noise present in typical gene expression time
 series datasets.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-bioc-tmixclust



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