[R-pkg-team] Bug#1012141: r-bioc-dada2: FTBFS with onetbb/2021.5.0-8 in experimental

Andrius Merkys merkys at debian.org
Mon May 30 20:32:29 BST 2022


Source: r-bioc-dada2
Version: 1.24.0+dfsg-1
Severity: normal
Tags: ftbfs

Hello,

tbb/onetbb transition (#1007222) is currently in the planning. During
test rebuild of libtbb-dev reverse dependencies with onetbb/2021.5.0-8
in experimental, current source failed to build with the following:

** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘dada2’ in dyn.load(file,
DLLpath = DLLpath, ...):
 unable to load shared object
'/<<PKGBUILDDIR>>/debian/r-bioc-dada2/usr/lib/R/site-library/00LOCK-r-bioc-dada2-1.24.0+dfsg/00new/dada2/libs/dada2.so':

/<<PKGBUILDDIR>>/debian/r-bioc-dada2/usr/lib/R/site-library/00LOCK-r-bioc-dada2-1.24.0+dfsg/00new/dada2/libs/dada2.so:
undefined symbol: _ZTIN3tbb4taskE
Error: loading failed
Execution halted
ERROR: loading failed

Andrius



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