[R-pkg-team] Bug#1043223: r-cran-biocmanager: autopkgtest needs update for r-bioc-biocversion

[Graham Inggs]

Source: r-cran-biocmanager
Version: 1.30.21.1+dfsg-1
Severity: serious
User: debian-ci at lists.debian.org
Usertags: needs-update

Hi Maintainer

Since the upload of r-bioc-biocversion 3.17.1-1, the autopkgtests of
r-cran-biocmanager are failing [1].  I've copied what I hope is the
relevant part of the log below.

Regards
Graham


[1] https://ci.debian.net/packages/r/r-cran-biocmanager/testing/amd64/


 38s > test_check("BiocManager")
 58s [ FAIL 1 | WARN 1 | SKIP 24 | PASS 84 ]
 58s
 58s == Skipped tests (24)
==========================================================
 59s * On CRAN (23): 'test_install.R:27:5', 'test_install.R:45:5',
 59s   'test_install.R:204:5', 'test_repositories.R:5:5',
 59s   'test_repositories.R:14:5', 'test_repositories.R:20:5',
 59s   'test_repositories.R:26:5', 'test_repositories.R:33:5',
 59s   'test_repositories.R:43:5', 'test_repositories.R:118:5',
 59s   'test_repositories.R:127:5', 'test_repositories.R:165:5',
 59s   'test_version.R:17:5', 'test_version.R:39:5', 'test_version.R:92:5',
 59s   'test_version.R:107:5', 'test_version.R:147:5', 'test_version.R:194:5',
 59s   'test_version.R:235:5', 'test_version.R:246:5', 'test_version.R:277:5',
 59s   'test_version.R:328:5', 'test_version.R:387:5'
 59s * too idiosyncratic for standardized testing (1): 'test_install.R:164:5'
 59s
 59s == Failed tests
================================================================
 59s -- Failure ('test_install.R:355:5'): install() without package
names passes ... to install.packages --
 59s `object` is not TRUE
 59s
 59s `actual`:   FALSE
 59s `expected`: TRUE
 59s
 59s [ FAIL 1 | WARN 1 | SKIP 24 | PASS 84 ]