[R-pkg-team] Bug#1039662: r-cran-sjmisc: autopkgtest failure with r-base (4.3.1-1)
Bas Couwenberg
sebastic at xs4all.nl
Wed Jun 28 07:37:45 BST 2023
Source: r-cran-sjmisc
Version: 2.8.9-1
Severity: serious
Justification: autopkgtest failure
Dear Maintainer,
93s [ FAIL 10 | WARN 2 | SKIP 9 | PASS 148 ]
93s
93s ══ Skipped tests ═══════════════════════════════════════════════════════════════
93s • empty test (6)
93s • On CRAN (3)
93s
93s ══ Failed tests ════════════════════════════════════════════════════════════════
93s ── Error ('test-frq-weights.R:16'): frq-weights ────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. └─sjmisc::frq(efc, e16sex) at test-frq-weights.R:16:2
93s 2. └─sjmisc:::frq_helper(...)
93s 3. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 4. │ └─base::withCallingHandlers(...)
93s 5. ├─dplyr::full_join(dat, dat2)
93s 6. └─dplyr:::full_join.data.frame(dat, dat2)
93s 7. └─dplyr:::join_mutate(...)
93s 8. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 9. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 10. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 11. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 12. ├─base::withCallingHandlers(...)
93s 13. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:9'): frq ─────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(frq(efc$e42dep), class = "list") at test-frq.R:9:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc$e42dep)
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:13'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(frq(efc$e42dep, sort.frq = "asc"), class = "list") at test-frq.R:13:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc$e42dep, sort.frq = "asc")
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:17'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(frq(efc, e42dep, e16sex), class = "list") at test-frq.R:17:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc, e42dep, e16sex)
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:21'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(...) at test-frq.R:21:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc, e42dep, e16sex, sort.frq = "asc")
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:25'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(frq(efc$c12hour, auto.grp = 5), class = "list") at test-frq.R:25:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc$c12hour, auto.grp = 5)
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:29'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(...) at test-frq.R:29:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc, c12hour, e17age, auto.grp = 5)
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:33'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─testthat::expect_is(...) at test-frq.R:33:2
93s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
93s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
93s 4. └─sjmisc::frq(efc, c12hour, e17age, auto.grp = 5, sort.frq = "desc")
93s 5. └─sjmisc:::frq_helper(...)
93s 6. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 7. │ └─base::withCallingHandlers(...)
93s 8. ├─dplyr::full_join(dat, dat2)
93s 9. └─dplyr:::full_join.data.frame(dat, dat2)
93s 10. └─dplyr:::join_mutate(...)
93s 11. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 12. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 13. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 14. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 15. ├─base::withCallingHandlers(...)
93s 16. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:37'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. └─sjmisc::frq(efc$e42dep, title = "test") at test-frq.R:37:2
93s 2. └─sjmisc:::frq_helper(...)
93s 3. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 4. │ └─base::withCallingHandlers(...)
93s 5. ├─dplyr::full_join(dat, dat2)
93s 6. └─dplyr:::full_join.data.frame(dat, dat2)
93s 7. └─dplyr:::join_mutate(...)
93s 8. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 9. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 10. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 11. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 12. ├─base::withCallingHandlers(...)
93s 13. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s ── Error ('test-frq.R:86'): frq ────────────────────────────────────────────────
93s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols
93s Backtrace:
93s ▆
93s 1. ├─efc %>% dplyr::group_by(c172code) %>% ... at test-frq.R:86:2
93s 2. └─sjmisc::frq(., c161sex, e15relat, grp.strings = 2)
93s 3. └─sjmisc:::frq_helper(...)
93s 4. ├─base::suppressMessages(dplyr::full_join(dat, dat2))
93s 5. │ └─base::withCallingHandlers(...)
93s 6. ├─dplyr::full_join(dat, dat2)
93s 7. └─dplyr:::full_join.data.frame(dat, dat2)
93s 8. └─dplyr:::join_mutate(...)
93s 9. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 10. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,1]>`)
93s 11. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value))
93s 12. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg)
93s 13. ├─base::withCallingHandlers(...)
93s 14. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]])
93s
93s [ FAIL 10 | WARN 2 | SKIP 9 | PASS 148 ]
https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-cran-sjmisc/34918488/log.gz
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