[R-pkg-team] Bug#1079062: RM: r-bioc-deseq2 [armel armhf i386] -- ROM; Upstream no longer supports 32-bit systems

[Michael R. Crusoe]

Package: ftp.debian.org
Severity: normal
X-Debbugs-Cc: r-bioc-deseq2 at packages.debian.org, debian-r at lists.debian.org, crusoe at debian.org
Control: affects -1 + src:r-bioc-deseq2
Control: block 1076843 by -1
User: ftp.debian.org at packages.debian.org
Usertags: remove

Dear FTP Team,

As part of the Bioconductor 3.19 transition, the Debian R team agreed [0] to remove builds for 32-bit architectures (where possible) in line with upstream's cessation of support for 32-bit systems.

Here is the 24th such removal request, this time for r-bioc-deseq2. `dak` complains about 5 broken build-depends, but all of them are "arch:all" and all leaf packages with the exception of "r-bioc-dexseq", which is a {build-,}dependency of "r-bioc-isoformswitchanalyzer", itself an "arch: all" leaf package. In my opinion, removing the 32-bit packages for r-bioc-deseq2 should not cause a problem.

$ ssh mirror.ftp-master.debian.org "dak rm --architecture=armel,armhf,i386 --no-arch-all-rdeps --binary-only --partial --rdep-check --no-action r-bioc-deseq2"
Will remove the following packages from unstable:

r-bioc-deseq2 | 1.42.1+dfsg-1 | armel, armhf, i386

Maintainer: Debian R Packages Maintainers <r-pkg-team at alioth-lists.debian.net>

------------------- Reason -------------------

----------------------------------------------

Checking reverse dependencies...
# Broken Build-Depends:
pigx-rnaseq: r-bioc-deseq2
r-bioc-degreport: r-bioc-deseq2
r-bioc-dexseq: r-bioc-deseq2 (1.44.0 >=)
r-bioc-htsfilter: r-bioc-deseq2
r-bioc-rgsepd: r-bioc-deseq2 (1.44.0 >=)

Dependency problem found.


---

Thanks!

[0] https://lists.debian.org/debian-r/2024/07/msg00033.html https://lists.debian.org/debian-r/2024/07/msg00035.html https://lists.debian.org/debian-r/2024/07/msg00045.html

-- 
Michael R. Crusoe
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