[R-pkg-team] Bug#1060929: r-bioc-savr: FTBFS: make: *** [debian/rules:4: binary] Error 255

[Lucas Nussbaum]

Source: r-bioc-savr
Version: 1.37.0-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
>  debian/rules binary
> dh binary --buildsystem R
>    dh_update_autotools_config -O--buildsystem=R
>    dh_autoreconf -O--buildsystem=R
>    dh_auto_configure -O--buildsystem=R
>    dh_auto_build -O--buildsystem=R
>    dh_auto_test -O--buildsystem=R
>    create-stamp debian/debhelper-build-stamp
>    dh_testroot -O--buildsystem=R
>    dh_prep -O--buildsystem=R
>    dh_auto_install --destdir=debian/r-bioc-savr/ -O--buildsystem=R
> I: R Package: savR Version: 1.37.0
> I: Building using R version 4.3.2-1
> I: R API version: r-api-4.0
> I: Using built-time from d/changelog: Thu, 20 Jul 2023 16:56:06 +0200
> 	mkdir -p /<<PKGBUILDDIR>>/debian/r-bioc-savr/usr/lib/R/site-library
> 	R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-bioc-savr/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 20 Jul 2023 16:56:06 +0200'"
> * installing *source* package ‘savR’ ...
> ** using staged installation
> ** R
> ** inst
> ** byte-compile and prepare package for lazy loading
> ** help
> *** installing help indices
> ** building package indices
> ** installing vignettes
> ** testing if installed package can be loaded from temporary location
> ** testing if installed package can be loaded from final location
> ** testing if installed package keeps a record of temporary installation path
> * DONE (savR)
> E: It is not possible to generate the r-api-bioc dependency at /usr/share/perl5/Debian/Debhelper/Buildsystem/R.pm line 307.
> I: Using r-cran-ggplot2 for Depends:ggplot2
> I: Using r-cran-cairo for Suggests:Cairo
> I: Using r-cran-testthat for Suggests:testthat
> I: Using r-cran-reshape2 for Imports:reshape2
> I: Using r-cran-scales for Imports:scales
> I: Using r-cran-gridextra for Imports:gridExtra
> I: Using r-cran-xml for Imports:XML
> E: The 'git_branch' field contains 'master' but should start with RELEASE
> make: *** [debian/rules:4: binary] Error 255


The full build log is available from:
http://qa-logs.debian.net/2024/01/15/r-bioc-savr_1.37.0-1_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240115;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240115&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.