[R-pkg-team] Bug#1061981: ITP: r-bioc-decontam -- identify contaminants in marker-gene and metagenomics sequencing sata
Andreas Tille
tille at debian.org
Tue Jan 30 16:44:11 GMT 2024
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-decontam -- identify contaminants in marker-gene and metagenomics sequencing sata
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist
* Package name : r-bioc-decontam
Version : 1.22.0
Upstream Author : Benjamin Callahan,
* URL : https://bioconductor.org/packages/decontam/
* License : Artistic-2.0
Programming Lang: GNU R
Description : identify contaminants in marker-gene and metagenomics sequencing sata
Simple statistical identification of contaminating sequence features in
marker-gene or metagenomics data. Works on any kind of feature derived from
environmental sequencing data (e.g. ASVs, OTUs, taxonomic groups, MAGs,...).
Requires DNA quantitation data or sequenced negative control samples.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-decontam
More information about the R-pkg-team
mailing list