[R-pkg-team] Bug#1111760: r-bioc-rhdf5lib: autopkgtest regression: Expected TRUE, got FALSE

[Paul Gevers]

Source: r-bioc-rhdf5lib
Version: 1.28.0+dfsg-2
Severity: serious
User: debian-ci at lists.debian.org
Usertags: regression

Dear maintainer(s),

Your package has an autopkgtest, great. However, it fails. Can you 
please investigate the situation and fix it? I copied some of the output 
at the bottom of this report.

The release team has announced [1] that failing autopkgtest on amd64 and 
arm64 are considered RC in testing.

More information about this bug and the reason for filing it can be 
found on 
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://lists.debian.org/debian-devel-announce/2019/07/msg00002.html

https://ci.debian.net/packages/r/r-bioc-rhdf5lib/testing/amd64/62856312/

  81s autopkgtest [00:05:33]: test pkg-r-autopkgtest: 
[-----------------------
  82s Test: Try to load the R library Rhdf5lib
  82s
  82s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
  82s Copyright (C) 2025 The R Foundation for Statistical Computing
  82s Platform: x86_64-pc-linux-gnu
  82s
  82s R is free software and comes with ABSOLUTELY NO WARRANTY.
  82s You are welcome to redistribute it under certain conditions.
  82s Type 'license()' or 'licence()' for distribution details.
  82s
  82s R is a collaborative project with many contributors.
  82s Type 'contributors()' for more information and
  82s 'citation()' on how to cite R or R packages in publications.
  82s
  82s Type 'demo()' for some demos, 'help()' for on-line help, or
  82s 'help.start()' for an HTML browser interface to help.
  82s Type 'q()' to quit R.
  82s
  82s > library('Rhdf5lib')
  82s >
  82s Test: Run tests for Rhdf5lib
  82s Start: tinytest.R
  82s
  82s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
  82s Copyright (C) 2025 The R Foundation for Statistical Computing
  82s Platform: x86_64-pc-linux-gnu
  82s
  82s R is free software and comes with ABSOLUTELY NO WARRANTY.
  82s You are welcome to redistribute it under certain conditions.
  82s Type 'license()' or 'licence()' for distribution details.
  82s
  82s R is a collaborative project with many contributors.
  82s Type 'contributors()' for more information and
  82s 'citation()' on how to cite R or R packages in publications.
  82s
  82s Type 'demo()' for some demos, 'help()' for on-line help, or
  82s 'help.start()' for an HTML browser interface to help.
  82s Type 'q()' to quit R.
  82s
  82s > if ( requireNamespace("tinytest", quietly=TRUE) ) {
  82s +   tinytest::test_package("Rhdf5lib")
  82s + }
  82s
test_library_version.R........    1 tests OK
test_library_version.R........    2 tests 1 fails 42ms
  82s
test_link_flags.R.............    0 tests
test_link_flags.R.............    0 tests
test_link_flags.R.............    0 tests
test_link_flags.R.............    0 tests
test_link_flags.R.............    0 tests
test_link_flags.R.............    1 tests OK
test_link_flags.R.............    2 tests OK
test_link_flags.R.............    3 tests OK
test_link_flags.R.............    4 tests OK
test_link_flags.R.............    5 tests OK
test_link_flags.R.............    6 tests OK
test_link_flags.R.............    7 tests OK
test_link_flags.R.............    8 tests OK 0.4s
  82s ----- FAILED[data]: test_library_version.R<3--3>
  82s  call| expect_true(grepl("^1\\.10\\.[0-9]+$", libver))
  82s  diff| Expected TRUE, got FALSE
  82s Error: 1 out of 10 tests failed
  82s Execution halted
  83s autopkgtest [00:05:35]: test pkg-r-autopkgtest: 
-----------------------]
-------------- next part --------------
A non-text attachment was scrubbed...
Name: OpenPGP_signature.asc
Type: application/pgp-signature
Size: 585 bytes
Desc: OpenPGP digital signature
URL: <http://alioth-lists.debian.net/pipermail/r-pkg-team/attachments/20250821/4facd7d4/attachment-0001.sig>