[R-pkg-team] New version of r-bioc-bsgenome breaks autopkgtests of r-bioc-variantannotation in testing

[Paul Gevers]

Hi Andreas,

On 08-05-18 15:13, Andreas Tille wrote:
> thanks a lot for your CI effort.  It is very welcome.

You're welcome.

>> [2] https://ci.debian.net/packages/r/r-bioc-variantannotation/testing/amd64/
> 
> I checked this and also
> 
>   https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-summarizedexperiment/262109/log.gz
> 
> for the other issue you posted.  It somehow seems that r-cran-rsqlite is
> not available.  I've uploaded yesterday version 2.1.1-1 and I'm afraid
> the issue just occured that package propagation is just in flux.
> 
> Am I missing something?

The following often (but very much not always) means that a retrigger of
the test will solve the issue. So please try that first, I'll note this
and keep an eye on it myself as well.

autopkgtest [11:07:02]: ERROR: erroneous package: Test dependencies are
unsatisfiable. A common reason is that your testbed is out of date with
respect to the archive, and you need to use a current testbed or run
apt-get update or use -U.

For background info, I am considering if we can use packages from
incoming.d.o somehow, that should solve one of the failure modes with
these characteristics. (This is already done in the unstable only
testing on ci.d.n).

Paul

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