[R-pkg-team] Bug#934654: ITP: r-cran-sctransform -- Variance Stabilizing Transformations for Single Cell UMI Data

Steffen Moeller moeller at debian.org
Tue Aug 13 00:18:27 BST 2019


Package: wnpp
Severity: wishlist

Subject: ITP: r-cran-sctransform -- Variance Stabilizing Transformations for Single Cell UMI Data
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist

* Package name    : r-cran-sctransform
  Version         : 0.2.0
  Upstream Author : Christoph Hafemeister <chafemeister at nygenome.org>
* URL             : https://cran.r-project.org/package=sctransform
* License         : GPL-3
  Programming Lang: GNU R
  Description     : Variance Stabilizing Transformations for Single Cell UMI Data
 A normalization method for single-cell UMI count data using a
 variance stabilizing transformation. The transformation is based on a
 negative binomial regression model with regularized parameters. As part of the
 same regression framework, this package also provides functions for
 batch correction, and data correction. See Hafemeister and Satija 2019
 <doi:10.1101/576827> for more details.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-cran-sctransform



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