[R-pkg-team] we need locfit for RNAseq packages

Steffen Möller steffen_moeller at gmx.de
Fri Sep 27 01:16:25 BST 2019


Hello,

I just successfully ran the pigx RNAseq pipeline on their sample
testset. This cost me this day since I happily missread the snakemake
output which goes into many logfiles and many places and we have done
some work in Debian to work around the missing locfit library, so the
DEseq2 gave me an error that it could not fit, instead of saying that
the library is missing, and I looked at what generated the data.

Ideas how to get locfit in?

Cheers,

Steffen




More information about the R-pkg-team mailing list