[Reproducible-builds] Bug#813981: pyentropy: FTBFS: ndexError: invalid slice
Chris Lamb
lamby at debian.org
Sun Feb 7 09:44:38 UTC 2016
Source: pyentropy
Version: 0.4.1-2
Severity: serious
Justification: fails to build from source
User: reproducible-builds at lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org
Dear Maintainer,
pyentropy fails to build from source in unstable/amd64:
[..]
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_qe('qe', 'plugin')
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 61, in do_1d_check
s.calculate_entropies(method=method, calc=allcalc, qe_method=qe_method)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 252, in calculate_entropies
self._qe_ent(qe_method,sampling,methods)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 370, in _qe_ent
sys = self._subsampled_instance(sl)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 595, in _subsampled_instance
return DiscreteSystem(self.X[:,sl], self.X_dims,
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_qe_pt('qe', 'pt')
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 61, in do_1d_check
s.calculate_entropies(method=method, calc=allcalc, qe_method=qe_method)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 252, in calculate_entropies
self._qe_ent(qe_method,sampling,methods)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 370, in _qe_ent
sys = self._subsampled_instance(sl)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 595, in _subsampled_instance
return DiscreteSystem(self.X[:,sl], self.X_dims,
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_plugin_sorted('plugin', None)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 267, in setUp
try_run(self.test, names)
File "/usr/lib/python2.7/dist-packages/nose/util.py", line 471, in try_run
return func()
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 98, in setup_1d_sorted
xs[start:end] = oce
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_pt_sorted('pt', None)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 267, in setUp
try_run(self.test, names)
File "/usr/lib/python2.7/dist-packages/nose/util.py", line 471, in try_run
return func()
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 98, in setup_1d_sorted
xs[start:end] = oce
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_qe_sorted('qe', 'plugin')
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 267, in setUp
try_run(self.test, names)
File "/usr/lib/python2.7/dist-packages/nose/util.py", line 471, in try_run
return func()
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 98, in setup_1d_sorted
xs[start:end] = oce
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_1d_qe_pt_sorted('qe', 'pt')
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 267, in setUp
try_run(self.test, names)
File "/usr/lib/python2.7/dist-packages/nose/util.py", line 471, in try_run
return func()
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 98, in setup_1d_sorted
xs[start:end] = oce
IndexError: invalid slice
======================================================================
ERROR: pyentropy.tests.test_systems.test_toy1_sorted
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 165, in test_toy1_sorted
s.calculate_entropies(method='plugin', calc=toycalc)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 256, in calculate_entropies
self._calc_ents(method, sampling, methods)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 29, in _calc_ents
self._sample(method=sampling)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/systems.py", line 714, in _sample
oce = d_X[indx]
IndexError: invalid slice
======================================================================
FAIL: pyentropy.tests.test_systems.test_toy1
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_systems.py", line 160, in test_toy1
assert_array_almost_equal(v, toytrue)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 912, in assert_array_almost_equal
precision=decimal)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 733, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not almost equal to 6 decimals
(mismatch 33.3333333333%)
x: array([ 2.251629, 1.584963, 2.169925, 3.141604, 2.567168, 3.421554])
y: array([ 2.251629, 1.584963, 2.169925, 2.836592, 2.947703, 3.421554])
======================================================================
FAIL: pyentropy.tests.test_utils.test_dec2base_1d
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_utils.py", line 65, in test_dec2base_1d
assert_equal(dec2base(x,3,4),y)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 316, in assert_equal
return assert_array_equal(actual, desired, err_msg, verbose)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 807, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 733, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
(mismatch 9.25925925926%)
x: array([[0, 0, 0, 0],
[0, 0, 0, 1],
[0, 0, 0, 2],...
y: array([[0, 0, 0, 0],
[0, 0, 0, 1],
[0, 0, 0, 2],...
======================================================================
FAIL: pyentropy.tests.test_utils.test_dec2base_2d
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1/pyentropy/tests/test_utils.py", line 68, in test_dec2base_2d
assert_equal(dec2base(x2,3,4),y)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 316, in assert_equal
return assert_array_equal(actual, desired, err_msg, verbose)
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 807, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 733, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
(mismatch 9.25925925926%)
x: array([[0, 0, 0, 0],
[0, 0, 0, 1],
[0, 0, 0, 2],...
y: array([[0, 0, 0, 0],
[0, 0, 0, 1],
[0, 0, 0, 2],...
----------------------------------------------------------------------
Ran 29 tests in 0.167s
FAILED (errors=7, failures=3)
Order 1 complete. Time: Sun Feb 7 10:30:03 2016
Order 2 complete. Time: Sun Feb 7 10:30:03 2016
Order 3 complete. Time: Sun Feb 7 10:30:03 2016
order: 1 ierr: 1 - The solution converged.
fval: 1.16850048156e-12 nfev: 9 njev: 1
order: 1 ierr: 1 - The solution converged.
fval: 1.16850048156e-12 nfev: 9 njev: 1
debian/rules:13: recipe for target 'override_dh_auto_test' failed
make[1]: *** [override_dh_auto_test] Error 1
make[1]: Leaving directory '/home/lamby/temp/cdt.20160207102950.HNDuxkvewQ/pyentropy-0.4.1'
debian/rules:6: recipe for target 'build' failed
make: *** [build] Error 2
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby at debian.org / chris-lamb.co.uk
`-
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