[Reproducible-builds] Bug#827833: rglpk: FTBFS: dh_clean: Please specify the compatibility level in debian/compat

Tue Jun 21 15:08:01 UTC 2016

Source: rglpk
Version: 0.6-1-1
Severity: serious
Justification: fails to build from source
User: reproducible-builds at lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org

Dear Maintainer,

rglpk fails to build from source in unstable/amd64:

  [..]

  Preparing to unpack .../liblapack-dev_3.6.0-2_amd64.deb ...
  Unpacking liblapack-dev (3.6.0-2) ...
  Selecting previously unselected package libtinfo-dev:amd64.
  Preparing to unpack .../libtinfo-dev_6.0+20160319-2_amd64.deb ...
  Unpacking libtinfo-dev:amd64 (6.0+20160319-2) ...
  Selecting previously unselected package libncurses5-dev:amd64.
  Preparing to unpack .../libncurses5-dev_6.0+20160319-2_amd64.deb ...
  Unpacking libncurses5-dev:amd64 (6.0+20160319-2) ...
  Selecting previously unselected package libreadline6-dev:amd64.
  Preparing to unpack .../libreadline6-dev_6.3-8+b4_amd64.deb ...
  Unpacking libreadline6-dev:amd64 (6.3-8+b4) ...
  Selecting previously unselected package libreadline-dev:amd64.
  Preparing to unpack .../libreadline-dev_6.3-8+b4_amd64.deb ...
  Unpacking libreadline-dev:amd64 (6.3-8+b4) ...
  Selecting previously unselected package libjpeg62-turbo-dev:amd64.
  Preparing to unpack .../libjpeg62-turbo-dev_1%3a1.5.0-1_amd64.deb ...
  Unpacking libjpeg62-turbo-dev:amd64 (1:1.5.0-1) ...
  Selecting previously unselected package libjpeg-dev.
  Preparing to unpack .../libjpeg-dev_1%3a1.5.0-1_all.deb ...
  Unpacking libjpeg-dev (1:1.5.0-1) ...
  Selecting previously unselected package libpcre16-3:amd64.
  Preparing to unpack .../libpcre16-3_2%3a8.38-3.1_amd64.deb ...
  Unpacking libpcre16-3:amd64 (2:8.38-3.1) ...
  Selecting previously unselected package libpcre32-3:amd64.
  Preparing to unpack .../libpcre32-3_2%3a8.38-3.1_amd64.deb ...
  Unpacking libpcre32-3:amd64 (2:8.38-3.1) ...
  Selecting previously unselected package libpcrecpp0v5:amd64.
  Preparing to unpack .../libpcrecpp0v5_2%3a8.38-3.1_amd64.deb ...
  Unpacking libpcrecpp0v5:amd64 (2:8.38-3.1) ...
  Selecting previously unselected package libpcre3-dev:amd64.
  Preparing to unpack .../libpcre3-dev_2%3a8.38-3.1_amd64.deb ...
  Unpacking libpcre3-dev:amd64 (2:8.38-3.1) ...
  Selecting previously unselected package zlib1g-dev:amd64.
  Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-2+b1_amd64.deb ...
  Unpacking zlib1g-dev:amd64 (1:1.2.8.dfsg-2+b1) ...
  Selecting previously unselected package libpng-dev:amd64.
  Preparing to unpack .../libpng-dev_1.6.23-1_amd64.deb ...
  Unpacking libpng-dev:amd64 (1.6.23-1) ...
  Selecting previously unselected package libbz2-dev:amd64.
  Preparing to unpack .../libbz2-dev_1.0.6-8_amd64.deb ...
  Unpacking libbz2-dev:amd64 (1.0.6-8) ...
  Selecting previously unselected package liblzma-dev:amd64.
  Preparing to unpack .../liblzma-dev_5.1.1alpha+20120614-2.1_amd64.deb ...
  Unpacking liblzma-dev:amd64 (5.1.1alpha+20120614-2.1) ...
  Selecting previously unselected package icu-devtools.
  Preparing to unpack .../icu-devtools_55.1-7_amd64.deb ...
  Unpacking icu-devtools (55.1-7) ...
  Selecting previously unselected package libicu-dev:amd64.
  Preparing to unpack .../libicu-dev_55.1-7_amd64.deb ...
  Unpacking libicu-dev:amd64 (55.1-7) ...
  Selecting previously unselected package cdbs.
  Preparing to unpack .../archives/cdbs_0.4.142_all.deb ...
  Unpacking cdbs (0.4.142) ...
  Selecting previously unselected package r-base-dev.
  Preparing to unpack .../r-base-dev_3.3.0.20160615-1_all.deb ...
  Unpacking r-base-dev (3.3.0.20160615-1) ...
  Selecting previously unselected package r-cran-slam.
  Preparing to unpack .../r-cran-slam_0.1-34-1_amd64.deb ...
  Unpacking r-cran-slam (0.1-34-1) ...
  Selecting previously unselected package libsuitesparseconfig4:amd64.
  Preparing to unpack .../libsuitesparseconfig4_1%3a4.5.3-1_amd64.deb ...
  Unpacking libsuitesparseconfig4:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libamd2:amd64.
  Preparing to unpack .../libamd2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libamd2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libcolamd2:amd64.
  Preparing to unpack .../libcolamd2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libcolamd2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libltdl7:amd64.
  Preparing to unpack .../libltdl7_2.4.6-0.1_amd64.deb ...
  Unpacking libltdl7:amd64 (2.4.6-0.1) ...
  Selecting previously unselected package libglpk40:amd64.
  Preparing to unpack .../libglpk40_4.60-2+b1_amd64.deb ...
  Unpacking libglpk40:amd64 (4.60-2+b1) ...
  Selecting previously unselected package libgmpxx4ldbl:amd64.
  Preparing to unpack .../libgmpxx4ldbl_2%3a6.1.0+dfsg-2_amd64.deb ...
  Unpacking libgmpxx4ldbl:amd64 (2:6.1.0+dfsg-2) ...
  Selecting previously unselected package libgmp-dev:amd64.
  Preparing to unpack .../libgmp-dev_2%3a6.1.0+dfsg-2_amd64.deb ...
  Unpacking libgmp-dev:amd64 (2:6.1.0+dfsg-2) ...
  Selecting previously unselected package libcamd2:amd64.
  Preparing to unpack .../libcamd2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libcamd2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libbtf1:amd64.
  Preparing to unpack .../libbtf1_1%3a4.5.3-1_amd64.deb ...
  Unpacking libbtf1:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libccolamd2:amd64.
  Preparing to unpack .../libccolamd2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libccolamd2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libmetis5:amd64.
  Preparing to unpack .../libmetis5_5.1.0.dfsg-4_amd64.deb ...
  Unpacking libmetis5:amd64 (5.1.0.dfsg-4) ...
  Selecting previously unselected package libcholmod3:amd64.
  Preparing to unpack .../libcholmod3_1%3a4.5.3-1_amd64.deb ...
  Unpacking libcholmod3:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libcxsparse3:amd64.
  Preparing to unpack .../libcxsparse3_1%3a4.5.3-1_amd64.deb ...
  Unpacking libcxsparse3:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libklu1:amd64.
  Preparing to unpack .../libklu1_1%3a4.5.3-1_amd64.deb ...
  Unpacking libklu1:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libldl2:amd64.
  Preparing to unpack .../libldl2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libldl2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libumfpack5:amd64.
  Preparing to unpack .../libumfpack5_1%3a4.5.3-1_amd64.deb ...
  Unpacking libumfpack5:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package librbio2:amd64.
  Preparing to unpack .../librbio2_1%3a4.5.3-1_amd64.deb ...
  Unpacking librbio2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libspqr2:amd64.
  Preparing to unpack .../libspqr2_1%3a4.5.3-1_amd64.deb ...
  Unpacking libspqr2:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libsuitesparse-dev:amd64.
  Preparing to unpack .../libsuitesparse-dev_1%3a4.5.3-1_amd64.deb ...
  Unpacking libsuitesparse-dev:amd64 (1:4.5.3-1) ...
  Selecting previously unselected package libglpk-dev.
  Preparing to unpack .../libglpk-dev_4.60-2+b1_amd64.deb ...
  Unpacking libglpk-dev (4.60-2+b1) ...
  Processing triggers for man-db (2.7.5-1) ...
  Processing triggers for mime-support (3.60) ...
  Processing triggers for libc-bin (2.22-12) ...
  Processing triggers for systemd (230-2) ...
  Setting up zip (3.0-11) ...
  Setting up unzip (6.0-20) ...
  Setting up ucf (3.0036) ...
  Setting up libpaper1:amd64 (1.1.24+nmu4) ...

  Creating config file /etc/papersize with new version
  Setting up libpaper-utils (1.1.24+nmu4) ...
  Setting up xdg-utils (1.1.1-1) ...
  Setting up libgfortran3:amd64 (6.1.1-7) ...
  Setting up libblas-common (3.6.0-2) ...
  Setting up libblas3 (3.6.0-2) ...
  update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
  Setting up libpng16-16:amd64 (1.6.23-1) ...
  Setting up libfreetype6:amd64 (2.6.3-3+b1) ...
  Setting up fonts-dejavu-core (2.35-1) ...
  Setting up fontconfig-config (2.11.0-6.4) ...
  Setting up libfontconfig1:amd64 (2.11.0-6.4) ...
  Setting up libpixman-1-0:amd64 (0.33.6-1) ...
  Setting up libxau6:amd64 (1:1.0.8-1) ...
  Setting up libxdmcp6:amd64 (1:1.1.2-1.1) ...
  Setting up libxcb1:amd64 (1.11.1-1) ...
  Setting up libx11-data (2:1.6.3-1) ...
  Setting up libx11-6:amd64 (2:1.6.3-1) ...
  Setting up libxcb-render0:amd64 (1.11.1-1) ...
  Setting up libxcb-shm0:amd64 (1.11.1-1) ...
  Setting up libxext6:amd64 (2:1.3.3-1) ...
  Setting up libxrender1:amd64 (1:0.9.9-2) ...
  Setting up libcairo2:amd64 (1.14.6-1+b1) ...
  Setting up libcurl3:amd64 (7.47.0-1) ...
  Setting up x11-common (1:7.7+15) ...
  update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
  invoke-rc.d: could not determine current runlevel
  invoke-rc.d: policy-rc.d denied execution of start.
  Setting up libice6:amd64 (2:1.0.9-1+b1) ...
  Setting up libjpeg62-turbo:amd64 (1:1.5.0-1) ...
  Setting up liblapack3 (3.6.0-2) ...
  update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
  Setting up fontconfig (2.11.0-6.4) ...
  Regenerating fonts cache... done.
  Setting up libthai-data (0.1.24-2) ...
  Setting up libdatrie1:amd64 (0.2.10-2) ...
  Setting up libthai0:amd64 (0.1.24-2) ...
  Setting up libpango-1.0-0:amd64 (1.40.1-1) ...
  Setting up libgraphite2-3:amd64 (1.3.8-1) ...
  Setting up libharfbuzz0b:amd64 (1.2.6-2) ...
  Setting up libpangoft2-1.0-0:amd64 (1.40.1-1) ...
  Setting up libpangocairo-1.0-0:amd64 (1.40.1-1) ...
  Setting up libsm6:amd64 (2:1.2.2-1+b1) ...
  Setting up libtcl8.6:amd64 (8.6.5+dfsg-2) ...
  Setting up libjbig0:amd64 (2.1-3.1) ...
  Setting up libtiff5:amd64 (4.0.6-1) ...
  Setting up libxft2:amd64 (2.3.2-1) ...
  Setting up libxss1:amd64 (1:1.2.2-1) ...
  Setting up libtk8.6:amd64 (8.6.5-1) ...
  Setting up libxt6:amd64 (1:1.1.5-1) ...
  Setting up openssl (1.0.2h-1) ...
  Setting up ca-certificates (20160104) ...
  Setting up r-base-core (3.3.0.20160615-1) ...

  Creating config file /etc/R/Renviron with new version
  Setting up libgfortran-5-dev:amd64 (5.4.0-4) ...
  Setting up gfortran-5 (5.4.0-4) ...
  Setting up gfortran (4:5.3.1-3) ...
  update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
  update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
  Setting up libblas-dev (3.6.0-2) ...
  update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
  Setting up liblapack-dev (3.6.0-2) ...
  update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
  Setting up libtinfo-dev:amd64 (6.0+20160319-2) ...
  Setting up libncurses5-dev:amd64 (6.0+20160319-2) ...
  Setting up libreadline6-dev:amd64 (6.3-8+b4) ...
  Setting up libreadline-dev:amd64 (6.3-8+b4) ...
  Setting up libjpeg62-turbo-dev:amd64 (1:1.5.0-1) ...
  Setting up libjpeg-dev (1:1.5.0-1) ...
  Setting up libpcre16-3:amd64 (2:8.38-3.1) ...
  Setting up libpcre32-3:amd64 (2:8.38-3.1) ...
  Setting up libpcrecpp0v5:amd64 (2:8.38-3.1) ...
  Setting up libpcre3-dev:amd64 (2:8.38-3.1) ...
  Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2+b1) ...
  Setting up libpng-dev:amd64 (1.6.23-1) ...
  Setting up libbz2-dev:amd64 (1.0.6-8) ...
  Setting up liblzma-dev:amd64 (5.1.1alpha+20120614-2.1) ...
  Setting up icu-devtools (55.1-7) ...
  Setting up libicu-dev:amd64 (55.1-7) ...
  Setting up cdbs (0.4.142) ...
  Setting up r-base-dev (3.3.0.20160615-1) ...
  Setting up r-cran-slam (0.1-34-1) ...
  Setting up libsuitesparseconfig4:amd64 (1:4.5.3-1) ...
  Setting up libamd2:amd64 (1:4.5.3-1) ...
  Setting up libcolamd2:amd64 (1:4.5.3-1) ...
  Setting up libltdl7:amd64 (2.4.6-0.1) ...
  Setting up libglpk40:amd64 (4.60-2+b1) ...
  Setting up libgmpxx4ldbl:amd64 (2:6.1.0+dfsg-2) ...
  Setting up libgmp-dev:amd64 (2:6.1.0+dfsg-2) ...
  Setting up libcamd2:amd64 (1:4.5.3-1) ...
  Setting up libbtf1:amd64 (1:4.5.3-1) ...
  Setting up libccolamd2:amd64 (1:4.5.3-1) ...
  Setting up libmetis5:amd64 (5.1.0.dfsg-4) ...
  Setting up libcholmod3:amd64 (1:4.5.3-1) ...
  Setting up libcxsparse3:amd64 (1:4.5.3-1) ...
  Setting up libklu1:amd64 (1:4.5.3-1) ...
  Setting up libldl2:amd64 (1:4.5.3-1) ...
  Setting up libumfpack5:amd64 (1:4.5.3-1) ...
  Setting up librbio2:amd64 (1:4.5.3-1) ...
  Setting up libspqr2:amd64 (1:4.5.3-1) ...
  Setting up libsuitesparse-dev:amd64 (1:4.5.3-1) ...
  Setting up libglpk-dev (4.60-2+b1) ...
  Setting up rglpk-build-deps (0.6-1-1) ...
  Processing triggers for libc-bin (2.22-12) ...
  Processing triggers for systemd (230-2) ...
  Processing triggers for ca-certificates (20160104) ...
  Updating certificates in /etc/ssl/certs...
  173 added, 0 removed; done.
  Running hooks in /etc/ca-certificates/update.d...
  done.

  **************************************************************************************
  ** Environment                                                                      **
  **************************************************************************************

  PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
  HOSTNAME=8bacaa880b48
  TERM=xterm
  PAGER=more
  DISPLAY=:0
  DOCKER_IMAGE=lamby-debian-sid
  DEB_BUILD_OPTIONS=parallel=9
  PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip
  HOME=/home/lamby
  LOGNAME=lamby
  SHLVL=1
  PWD=/home/lamby/temp/cdt.20160621160633.KoBgurZjii.rglpk/rglpk-0.6-1
  OLDPWD=/home/lamby/temp/cdt.20160621160633.KoBgurZjii.rglpk
  GPG_TTY=/dev/console
  QUILT_PATCHES=debian/patches
  QUILT_NO_DIFF_INDEX=1
  QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index
  DEBEMAIL=lamby at debian.org
  DEBFULLNAME=Chris Lamb
  EDITOR=vim
  LESS=-cgiFx4M
  BLASTER=A220 I5 D1 H5 P330 T6
  _=/usr/bin/env

  **************************************************************************************
  ** Building rglpk 0.6-1-1 on amd64                                                  **
  **************************************************************************************

   dpkg-buildpackage -rfakeroot -D -us -uc -b
  dpkg-buildpackage: info: source package rglpk
  dpkg-buildpackage: info: source version 0.6-1-1
  dpkg-buildpackage: info: source distribution unstable
  dpkg-buildpackage: info: source changed by Dirk Eddelbuettel <edd at debian.org>
   dpkg-source --before-build rglpk-0.6-1
  dpkg-buildpackage: info: host architecture amd64
   fakeroot debian/rules clean
  CDBS WARNING:    simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
  test -x debian/rules
  /usr/bin/make -f debian/rules reverse-config
  make[1]: Entering directory '/home/lamby/temp/cdt.20160621160633.KoBgurZjii.rglpk/rglpk-0.6-1'
  CDBS WARNING:    simple-patchsys.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
  make[1]: 'reverse-config' is up to date.
  make[1]: Leaving directory '/home/lamby/temp/cdt.20160621160633.KoBgurZjii.rglpk/rglpk-0.6-1'
  if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
  patches: 
  if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
  if [ "reverse-patches" != "reverse-patches" ] ; then \
  	/usr/bin/make -f debian/rules update-config ; \
  fi
  for dir in debian/patches ; do \
      rm -f $dir/*.log ; \
  done
  dh_clean 
  dh_clean: Please specify the compatibility level in debian/compat
  /usr/share/cdbs/1/rules/debhelper.mk:217: recipe for target 'clean' failed
  make: *** [clean] Error 2

  [..]

The full build log is attached.

Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby at debian.org / chris-lamb.co.uk
       `-
-------------- next part --------------
A non-text attachment was scrubbed...
Name: rglpk.0.6-1-1.unstable.amd64.log.txt.gz
Type: application/octet-stream
Size: 6771 bytes
Desc: not available
URL: <http://lists.alioth.debian.org/pipermail/reproducible-builds/attachments/20160621/4493840a/attachment.obj>