[med-svn] [Git][med-team/snakemake][upstream] New upstream version 6.12.3

[Rebecca N. Palmer (@rnpalmer-guest)]

Rebecca N. Palmer pushed to branch upstream at Debian Med / snakemake


Commits:
48c2b38f by Rebecca N. Palmer at 2022-01-08T19:36:27+00:00
New upstream version 6.12.3
- - - - -


30 changed files:

- .github/workflows/conventional-prs.yml
- .github/workflows/main.yml
- CHANGELOG.md
- docs/conf.py
- docs/requirements.txt
- docs/snakefiles/rules.rst
- docs/tutorial/advanced.rst
- docs/tutorial/short.rst
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/benchmark.py
- snakemake/common/__init__.py
- snakemake/dag.py
- snakemake/deployment/containerize.py
- snakemake/executors/__init__.py
- snakemake/jobs.py
- snakemake/modules.py
- snakemake/notebook.py
- snakemake/parser.py
- snakemake/script.py
- snakemake/shell.py
- snakemake/sourcecache.py
- snakemake/unit_tests/__init__.py
- snakemake/workflow.py
- tests/common.py
- + tests/test_checkpoint_allowed_rules/Snakefile
- + tests/test_checkpoint_allowed_rules/expected-results/b.txt
- + tests/test_checkpoint_allowed_rules/qsub
- + tests/test_config_merging/Snakefile
- + tests/test_config_merging/config_cmdline_01.yaml


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/48c2b38f41b49c57434abddedf474edbdcb3aa6d

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